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Lj6g3v0937000.2

Overview

Field Value
Gene ID Lj6g3v0937000
Transcript ID Lj6g3v0937000.2
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3-like [Glycine max] gi|356524179|ref|XP_003530709.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius
NON_CYTOPLASMIC_DOMAIN
1 59 59 – –
PANTHER
PTHR27000
2 382 381 2.00E-277 –
PANTHER
PTHR27000:SF121
2 382 381 2.00E-277 –
Phobius
TRANSMEMBRANE
60 79 20 – –
TMHMM
TMhelix
60 79 20 – –
Phobius
CYTOPLASMIC_DOMAIN
80 391 312 – –
Gene3D
G3DSA:3.30.200.20
82 187 106 5.60E-20 –
SUPERFAMILY
SSF56112
104 382 279 3.10E-75
IPR011009
SMART
SM00220
110 382 273 1.30E-34
IPR000719
ProSiteProfiles
PS50011
110 391 282 37.404
IPR000719
Pfam
PF00069
112 380 269 1.80E-47
IPR000719
Gene3D
G3DSA:1.10.510.10
188 388 201 2.60E-46 –
ProSitePatterns
PS00108
232 244 13 –
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions 8

Expression data

Expression pattern

Expression pattern of Lj6g3v0937000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj6g3v0937000.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.