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| Field | Value |
|---|---|
| Gene ID | Lj6g3v1090110 |
| Transcript ID | Lj6g3v1090110.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Major facilitator superfamily protein isoform 1 [Theobroma cacao] gi|508784030|gb|EOY31286.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 4 | 4 | – | – | |
| Phobius | 1 | 16 | 16 | – | – | |
| Phobius | 5 | 12 | 8 | – | – | |
| PANTHER | 10 | 484 | 475 | 0 | – | |
| PANTHER | 10 | 484 | 475 | 0 | – | |
| Phobius | 13 | 16 | 4 | – | – | |
| Phobius | 17 | 25 | 9 | – | – | |
| PIRSF | 20 | 486 | 467 | 6.20E-115 | ||
| SUPERFAMILY | 23 | 238 | 216 | 3.14E-55 | ||
| TMHMM | 25 | 44 | 20 | – | – | |
| Phobius | 26 | 45 | 20 | – | – | |
| Gene3D | 30 | 235 | 206 | 4.20E-55 | – | |
| ProSiteProfiles | 34 | 482 | 449 | 24.436 | ||
| Phobius | 46 | 112 | 67 | – | – | |
| Pfam | 84 | 412 | 329 | 4.10E-33 | ||
| CDD | 90 | 477 | 388 | 2.14E-18 | ||
| TMHMM | 113 | 135 | 23 | – | – | |
| Phobius | 113 | 135 | 23 | – | – | |
| Phobius | 136 | 140 | 5 | – | – | |
| Phobius | 141 | 169 | 29 | – | – | |
| TMHMM | 145 | 167 | 23 | – | – | |
| Phobius | 170 | 180 | 11 | – | – | |
| TMHMM | 180 | 202 | 23 | – | – | |
| Phobius | 181 | 200 | 20 | – | – | |
| Phobius | 201 | 205 | 5 | – | – | |
| TMHMM | 206 | 228 | 23 | – | – | |
| Phobius | 206 | 228 | 23 | – | – | |
| Phobius | 229 | 288 | 60 | – | – | |
| SUPERFAMILY | 270 | 481 | 212 | 3.14E-55 | ||
| Gene3D | 280 | 482 | 203 | 1.50E-45 | – | |
| Phobius | 289 | 310 | 22 | – | – | |
| TMHMM | 292 | 314 | 23 | – | – | |
| Phobius | 311 | 329 | 19 | – | – | |
| TMHMM | 329 | 351 | 23 | – | – | |
| Phobius | 330 | 351 | 22 | – | – | |
| Phobius | 352 | 357 | 6 | – | – | |
| TMHMM | 358 | 380 | 23 | – | – | |
| Phobius | 358 | 378 | 21 | – | – | |
| Phobius | 379 | 389 | 11 | – | – | |
| Phobius | 390 | 412 | 23 | – | – | |
| TMHMM | 390 | 412 | 23 | – | – | |
| Phobius | 413 | 423 | 11 | – | – | |
| Phobius | 424 | 446 | 23 | – | – | |
| TMHMM | 425 | 447 | 23 | – | – | |
| Phobius | 447 | 457 | 11 | – | – | |
| TMHMM | 457 | 476 | 20 | – | – | |
| Phobius | 458 | 477 | 20 | – | – | |
| Phobius | 478 | 487 | 10 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj6g3v1090110.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v1090110.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.