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| Field | Value |
|---|---|
| Gene ID | Lj6g3v1201410 |
| Transcript ID | Lj6g3v1201410.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: mechanosensitive ion channel protein 10-like [Cicer arietinum] gi|502165208|ref|XP_004513470.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PIRSF | 1 | 766 | 766 | 2.90E-210 | ||
| Phobius | 1 | 196 | 196 | – | – | |
| PANTHER | 15 | 763 | 749 | 0 | – | |
| PANTHER | 15 | 763 | 749 | 0 | – | |
| MobiDBLite | 31 | 64 | 34 | – | – | |
| MobiDBLite | 124 | 165 | 42 | – | – | |
| TMHMM | 197 | 216 | 20 | – | – | |
| Phobius | 197 | 214 | 18 | – | – | |
| Phobius | 215 | 225 | 11 | – | – | |
| Phobius | 226 | 254 | 29 | – | – | |
| TMHMM | 231 | 253 | 23 | – | – | |
| Phobius | 255 | 273 | 19 | – | – | |
| Phobius | 274 | 293 | 20 | – | – | |
| TMHMM | 274 | 296 | 23 | – | – | |
| Phobius | 294 | 304 | 11 | – | – | |
| Phobius | 305 | 325 | 21 | – | – | |
| TMHMM | 311 | 333 | 23 | – | – | |
| Phobius | 326 | 541 | 216 | – | – | |
| Pfam | 540 | 744 | 205 | 2.20E-21 | ||
| Phobius | 542 | 562 | 21 | – | – | |
| TMHMM | 542 | 564 | 23 | – | – | |
| Phobius | 563 | 573 | 11 | – | – | |
| Phobius | 574 | 598 | 25 | – | – | |
| TMHMM | 574 | 596 | 23 | – | – | |
| SUPERFAMILY | 590 | 649 | 60 | 1.11E-11 | ||
| Phobius | 599 | 766 | 168 | – | – | |
| Gene3D | 600 | 649 | 50 | 8.90E-11 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj6g3v1201410.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v1201410.1, powered by CORGI.
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