Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
IPR016688 is a Mechanosensitive ion channel MscS-like, plants/fungi.
<p>This entry represents a group of MscS-like (mechanosensitive channels of small conductance-like) proteins found in fungi and plants. Ten MscS-Like (MSL) proteins have been found in the genome of Arabidopsis thaliana [[cite:PUB00057879], [cite:PUB00057878]]. In the fission yeast<i>Schizosaccharomyces pombe</i>the mechanosensitive ion channel proteins are known as Msy1 and Msy2 [[cite:PUB00089654]].</p> <p>Mechanosensitive (MS) channels provide protection against hypo-osmotic shock, responding both to stretching of the cell membrane and to membrane depolarisation. They are present in the membranes of organisms from the three domains of life: bacteria, archaea, and eukarya [[cite:PUB00013957]]. There are two families of MS channels: large-conductance MS channels (MscL) and small-conductance MS channels (MscS or YGGB). The pressure threshold for MscS opening is 50% that of MscL [[cite:PUB00013956]]. The MscS family is much larger and more variable in size and sequence than the MscL family. Much of the diversity in MscS proteins occurs in the size of the transmembrane regions, which ranges from three to eleven transmembrane helices, although the three C-terminal helices are conserved.</p> <p>In the fission yeast<i>Schizosaccharomyces pombe</i>the mechanosensitive ion channel proteins are known as Msy1 and Msy2 [[cite:PUB00089654]].</p>
This description is obtained from EB-eye REST.
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: mechanosensitive ion channel protein 10-like [Cicer arietinum] gi|502165208|ref|XP_004513470.1| | 14 | ||
| – | PREDICTED: mechanosensitive ion channel protein 6-like isoform X1 [Cicer arietinum] gi|502121167|ref|XP_004497211.1| | 15 | ||
| – | PREDICTED: mechanosensitive ion channel protein 10-like [Cicer arietinum] gi|502165208|ref|XP_004513470.1| | 14 | ||
| – | Mechanosensitive ion channel family protein; TAIR: AT5G12080.1 mechanosensitive channel of small conductance-like 10; Swiss-Prot: sp|Q9LYG9|MSL10_ARATH Mechanosensitive ion channel protein 10; TrEMBL-Plants: tr|K7KTA0|K7KTA0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0370600 | 15 | ||
| – | Mechanosensitive ion channel family protein; TAIR: AT1G78610.1 mechanosensitive channel of small conductance-like 6; Swiss-Prot: sp|Q9SYM1|MSL6_ARATH Mechanosensitive ion channel protein 6; TrEMBL-Plants: tr|I1NF72|I1NF72_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0351500 | 16 | ||
| – | Mechanosensitive ion channel family protein; TAIR: AT5G12080.1 mechanosensitive channel of small conductance-like 10; Swiss-Prot: sp|Q9LYG9|MSL10_ARATH Mechanosensitive ion channel protein 10; TrEMBL-Plants: tr|A0A0B2RXT1|A0A0B2RXT1_GLYSO Mechanosensitive ion channel protein 10; Found in the gene: LotjaGi6g1v0226700 | 15 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 16.67 |