Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

Lj6g3v1368640.1

Overview

Field Value
Gene ID Lj6g3v1368640
Transcript ID Lj6g3v1368640.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300-like [Cicer arietinum] gi|502085559|ref|XP_004487945.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR27009:SF17
46 395 350 2.20E-237 –
PANTHER
PTHR27009
46 395 350 2.20E-237 –
SUPERFAMILY
SSF56112
55 341 287 1.32E-78
IPR011009
Gene3D
G3DSA:3.30.200.20
58 133 76 4.50E-25 –
SMART
SM00220
69 340 272 2.60E-34
IPR000719
ProSiteProfiles
PS50011
69 354 286 37.404
IPR000719
Pfam
PF07714
73 340 268 5.60E-49
IPR001245
ProSitePatterns
PS00107
75 97 23 –
IPR017441
Gene3D
G3DSA:1.10.510.10
134 339 206 5.20E-43 –
ProSitePatterns
PS00108
190 202 13 –
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions 5

Expression data

Expression pattern

Expression pattern of Lj6g3v1368640.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj6g3v1368640.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.