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| Field | Value |
|---|---|
| Gene ID | Lj6g3v1371880 |
| Transcript ID | Lj6g3v1371880.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: ankyrin repeat-containing protein At3g12360-like [Glycine max] gi|356532642|ref|XP_003534880.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 225 | 225 | 0 | – | |
| PANTHER | 1 | 225 | 225 | 0 | – | |
| Phobius | 1 | 423 | 423 | – | – | |
| Gene3D | 43 | 226 | 184 | 7.70E-22 | ||
| ProSiteProfiles | 44 | 180 | 137 | 15.618 | ||
| SMART | 44 | 73 | 30 | 670 | ||
| SUPERFAMILY | 48 | 223 | 176 | 1.38E-19 | ||
| CDD | 48 | 165 | 118 | 1.55E-14 | – | |
| SMART | 79 | 109 | 31 | 250 | ||
| Pfam | 84 | 175 | 92 | 7.70E-09 | ||
| CDD | 111 | 225 | 115 | 6.01E-06 | – | |
| SMART | 114 | 143 | 30 | 6.5 | ||
| SMART | 148 | 177 | 30 | 1.4 | ||
| ProSiteProfiles | 148 | 180 | 33 | 8.95 | ||
| PANTHER | 252 | 585 | 334 | 0 | – | |
| PANTHER | 252 | 585 | 334 | 0 | – | |
| Gene3D | 265 | 357 | 93 | 7.70E-22 | ||
| SMART | 309 | 338 | 30 | 36 | ||
| Pfam | 419 | 531 | 113 | 2.90E-25 | ||
| Phobius | 424 | 445 | 22 | – | – | |
| TMHMM | 426 | 448 | 23 | – | – | |
| Phobius | 446 | 464 | 19 | – | – | |
| Phobius | 465 | 490 | 26 | – | – | |
| TMHMM | 468 | 490 | 23 | – | – | |
| Phobius | 491 | 510 | 20 | – | – | |
| TMHMM | 503 | 525 | 23 | – | – | |
| Phobius | 511 | 534 | 24 | – | – | |
| Phobius | 535 | 553 | 19 | – | – | |
| TMHMM | 540 | 562 | 23 | – | – | |
| Phobius | 554 | 577 | 24 | – | – | |
| Phobius | 578 | 585 | 8 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj6g3v1371880.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v1371880.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.