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| Field | Value |
|---|---|
| Gene ID | Lj6g3v1464020 |
| Transcript ID | Lj6g3v1464020.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gi|334185156|ref|NP_001189833.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 6 | 6 | 6.50E-200 | – | |
| PANTHER | 1 | 6 | 6 | 6.50E-200 | – | |
| SUPERFAMILY | 24 | 187 | 164 | 8.23E-13 | ||
| Gene3D | 72 | 185 | 114 | 2.10E-04 | ||
| SUPERFAMILY | 245 | 345 | 101 | 8.23E-13 | ||
| Gene3D | 285 | 344 | 60 | 2.10E-04 | ||
| PANTHER | 287 | 471 | 185 | 6.50E-200 | – | |
| PANTHER | 287 | 471 | 185 | 6.50E-200 | – | |
| SMART | 369 | 409 | 41 | 0.47 | ||
| Gene3D | 374 | 660 | 287 | 1.40E-25 | ||
| Pfam | 376 | 409 | 34 | 0.027 | ||
| ProSiteProfiles | 377 | 462 | 86 | 17.086 | ||
| ProSiteProfiles | 377 | 418 | 42 | 9.573 | ||
| SUPERFAMILY | 392 | 623 | 232 | 4.73E-27 | ||
| ProSitePatterns | 396 | 410 | 15 | – | ||
| SMART | 414 | 453 | 40 | 3.30E-06 | ||
| Pfam | 419 | 453 | 35 | 6.40E-05 | ||
| ProSiteProfiles | 421 | 454 | 34 | 12.514 | ||
| SMART | 495 | 531 | 37 | 360 | ||
| PANTHER | 509 | 661 | 153 | 6.50E-200 | – | |
| PANTHER | 509 | 661 | 153 | 6.50E-200 | – | |
| SMART | 583 | 622 | 40 | 67 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj6g3v1464020.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v1464020.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.