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| Field | Value |
|---|---|
| Gene ID | Lj6g3v1618410 |
| Transcript ID | Lj6g3v1618410.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: AP-4 complex subunit mu-1-like isoform 1 [Glycine max] gi|356552963|ref|XP_003544829.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 143 | 143 | 1.30E-144 | – | |
| PIRSF | 1 | 441 | 441 | 1.40E-105 | ||
| Gene3D | 1 | 140 | 140 | 1.10E-42 | – | |
| Phobius | 1 | 439 | 439 | – | – | |
| PANTHER | 1 | 143 | 143 | 1.30E-144 | – | |
| SUPERFAMILY | 1 | 141 | 141 | 5.49E-35 | ||
| PRINTS | 12 | 32 | 21 | 5.10E-31 | ||
| PRINTS | 101 | 128 | 28 | 5.10E-31 | ||
| PANTHER | 159 | 434 | 276 | 1.30E-144 | – | |
| PANTHER | 159 | 434 | 276 | 1.30E-144 | – | |
| CDD | 174 | 439 | 266 | 1.52E-132 | – | |
| SUPERFAMILY | 182 | 429 | 248 | 3.66E-67 | ||
| Pfam | 182 | 429 | 248 | 3.10E-63 | ||
| Gene3D | 182 | 341 | 160 | 5.90E-48 | – | |
| ProSiteProfiles | 183 | 453 | 271 | 32.866 | ||
| PRINTS | 256 | 283 | 28 | 5.10E-31 | ||
| PRINTS | 325 | 340 | 16 | 5.10E-31 | ||
| Phobius | 440 | 458 | 19 | – | – | |
| Phobius | 459 | 481 | 23 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Intracellular protein transport | The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell. | ||
| Biological process | Vesicle-mediated transport | A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane. | ||
| Cellular component | Clathrin adaptor complex | A membrane coat adaptor complex that links clathrin to a membrane. |
Expression pattern of Lj6g3v1618410.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v1618410.1, powered by CORGI.
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