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| Field | Value |
|---|---|
| Gene ID | Lj6g3v1790940 |
| Transcript ID | Lj6g3v1790940.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Inversin [Medicago truncatula] gi|357447075|ref|XP_003593813.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 526 | 526 | – | – | |
| PANTHER | 20 | 121 | 102 | 2.00E-201 | – | |
| PANTHER | 20 | 121 | 102 | 2.00E-201 | – | |
| SUPERFAMILY | 25 | 225 | 201 | 5.52E-22 | ||
| Gene3D | 25 | 226 | 202 | 7.70E-15 | ||
| CDD | 51 | 204 | 154 | 5.68E-12 | – | |
| SMART | 53 | 83 | 31 | 940 | ||
| ProSiteProfiles | 53 | 224 | 172 | 9.834 | ||
| SMART | 93 | 124 | 32 | 0.39 | ||
| PANTHER | 140 | 228 | 89 | 2.00E-201 | – | |
| PANTHER | 140 | 228 | 89 | 2.00E-201 | – | |
| SMART | 147 | 176 | 30 | 17 | ||
| SMART | 183 | 212 | 30 | 150 | ||
| Gene3D | 341 | 452 | 112 | 4.90E-06 | ||
| PANTHER | 350 | 675 | 326 | 2.00E-201 | – | |
| PANTHER | 350 | 675 | 326 | 2.00E-201 | – | |
| SUPERFAMILY | 356 | 434 | 79 | 5.52E-22 | ||
| SMART | 376 | 406 | 31 | 1100 | ||
| Pfam | 518 | 628 | 111 | 5.20E-22 | ||
| TMHMM | 526 | 548 | 23 | – | – | |
| Phobius | 527 | 545 | 19 | – | – | |
| Phobius | 546 | 564 | 19 | – | – | |
| TMHMM | 563 | 585 | 23 | – | – | |
| Phobius | 565 | 588 | 24 | – | – | |
| Phobius | 589 | 608 | 20 | – | – | |
| TMHMM | 606 | 628 | 23 | – | – | |
| Phobius | 609 | 631 | 23 | – | – | |
| Phobius | 632 | 642 | 11 | – | – | |
| TMHMM | 643 | 665 | 23 | – | – | |
| Phobius | 643 | 665 | 23 | – | – | |
| Phobius | 666 | 676 | 11 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj6g3v1790940.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v1790940.2, powered by CORGI.
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