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Lj6g3v1915960.1

Overview

Field Value
Gene ID Lj6g3v1915960
Transcript ID Lj6g3v1915960.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: receptor-like cytosolic serine/threonine-protein kinase RBK2-like [Cicer arietinum] gi|502078880|ref|XP_004486085.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 84 84 – –
PANTHER
PTHR27001
62 462 401 2.90E-239 –
PANTHER
PTHR27001:SF193
62 462 401 2.90E-239 –
Gene3D
G3DSA:2.60.120.200
124 171 48 3.40E-06
IPR013320
SUPERFAMILY
SSF56112
144 430 287 6.97E-72
IPR011009
SMART
SM00220
165 405 241 2.80E-21
IPR000719
ProSiteProfiles
PS50011
165 437 273 33.983
IPR000719
Pfam
PF07714
168 374 207 3.40E-39
IPR001245
ProSitePatterns
PS00107
171 193 23 –
IPR017441
Gene3D
G3DSA:3.30.200.20
172 227 56 1.30E-18 –
Gene3D
G3DSA:1.10.510.10
228 428 201 5.90E-40 –
ProSitePatterns
PS00108
284 296 13 –
IPR008271
MobiDBLite
mobidb-lite
508 588 81 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions 15

Expression data

Expression pattern

Expression pattern of Lj6g3v1915960.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj6g3v1915960.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.