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| Field | Value |
|---|---|
| Gene ID | Lj6g3v2006450 |
| Transcript ID | Lj6g3v2006450.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | NB-LRR type disease resistance protein Rps1-k-2 [Medicago truncatula] gi|357457003|ref|XP_003598782.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 765 | 765 | 0 | – | |
| Phobius | 1 | 2 | 2 | – | – | |
| Phobius | 1 | 19 | 19 | – | – | |
| PANTHER | 1 | 765 | 765 | 0 | – | |
| Phobius | 3 | 14 | 12 | – | – | |
| Phobius | 15 | 19 | 5 | – | – | |
| Phobius | 20 | 1237 | 1218 | – | – | |
| Coils | 41 | 61 | 21 | – | – | |
| SUPERFAMILY | 156 | 420 | 265 | 1.67E-66 | ||
| Gene3D | 164 | 330 | 167 | 7.10E-14 | ||
| Pfam | 180 | 447 | 268 | 1.70E-61 | ||
| PRINTS | 187 | 202 | 16 | 1.00E-18 | – | |
| PRINTS | 260 | 274 | 15 | 1.00E-18 | – | |
| PRINTS | 357 | 371 | 15 | 1.00E-18 | – | |
| SUPERFAMILY | 481 | 684 | 204 | 6.12E-38 | ||
| Gene3D | 560 | 666 | 107 | 3.80E-16 | ||
| Gene3D | 713 | 942 | 230 | 1.40E-13 | ||
| SUPERFAMILY | 714 | 904 | 191 | 6.12E-38 | ||
| PANTHER | 824 | 848 | 25 | 0 | – | |
| PANTHER | 824 | 848 | 25 | 0 | – | |
| PRINTS | 871 | 887 | 17 | 1.00E-18 | – | |
| SUPERFAMILY | 920 | 1212 | 293 | 1.87E-28 | ||
| Gene3D | 943 | 1207 | 265 | 7.30E-24 | ||
| PANTHER | 1171 | 1195 | 25 | 0 | – | |
| PANTHER | 1171 | 1195 | 25 | 0 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of Lj6g3v2006450.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v2006450.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.