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| Field | Value |
|---|---|
| Gene ID | Lj6g3v2043010 |
| Transcript ID | Lj6g3v2043010.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | NB-LRR type disease resistance protein Rps1-k-2 [Medicago truncatula] gi|357457003|ref|XP_003598782.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 765 | 765 | 0 | – | |
| Phobius | 1 | 19 | 19 | – | – | |
| Phobius | 1 | 2 | 2 | – | – | |
| PANTHER | 1 | 765 | 765 | 0 | – | |
| Phobius | 3 | 14 | 12 | – | – | |
| CDD | 13 | 129 | 117 | 1.01E-07 | – | |
| Phobius | 15 | 19 | 5 | – | – | |
| Phobius | 20 | 1236 | 1217 | – | – | |
| SUPERFAMILY | 154 | 421 | 268 | 1.48E-66 | ||
| Gene3D | 169 | 304 | 136 | 1.80E-11 | ||
| Pfam | 183 | 448 | 266 | 2.10E-57 | ||
| PRINTS | 188 | 203 | 16 | 3.10E-18 | – | |
| PRINTS | 261 | 275 | 15 | 3.10E-18 | – | |
| PRINTS | 358 | 372 | 15 | 3.10E-18 | – | |
| SUPERFAMILY | 481 | 684 | 204 | 3.13E-39 | ||
| Gene3D | 558 | 687 | 130 | 9.20E-28 | ||
| PRINTS | 610 | 626 | 17 | 3.10E-18 | – | |
| Coils | 696 | 716 | 21 | – | – | |
| SUPERFAMILY | 714 | 898 | 185 | 3.13E-39 | ||
| Gene3D | 748 | 884 | 137 | 9.20E-28 | ||
| SUPERFAMILY | 944 | 1227 | 284 | 2.21E-21 | ||
| Gene3D | 968 | 1226 | 259 | 5.30E-16 | ||
| PANTHER | 1086 | 1111 | 26 | 0 | – | |
| PANTHER | 1086 | 1111 | 26 | 0 | – | |
| PANTHER | 1187 | 1210 | 24 | 0 | – | |
| PANTHER | 1187 | 1210 | 24 | 0 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of Lj6g3v2043010.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v2043010.1, powered by CORGI.
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