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Lj6g3v2218110.1

Overview

Field Value
Gene ID Lj6g3v2218110
Transcript ID Lj6g3v2218110.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: disease resistance protein At4g27190-like [Vitis vinifera] gi|359488027|ref|XP_002269288.2|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SUPERFAMILY
SSF52540
111 340 230 1.52E-31
IPR027417
PANTHER
PTHR23155
115 337 223 5.20E-115 –
PANTHER
PTHR23155:SF554
115 337 223 5.20E-115 –
Gene3D
G3DSA:3.40.50.300
117 266 150 1.90E-07
IPR027417
Pfam
PF00931
118 337 220 1.50E-26
IPR002182
PRINTS
PR00364
134 149 16 6.20E-11 –
PRINTS
PR00364
207 221 15 6.20E-11 –
PRINTS
PR00364
305 319 15 6.20E-11 –
PANTHER
PTHR23155:SF554
365 633 269 5.20E-115 –
PANTHER
PTHR23155
365 633 269 5.20E-115 –
SUPERFAMILY
SSF52058
442 602 161 1.19E-28
IPR032675
Gene3D
G3DSA:3.80.10.10
465 623 159 7.50E-21
IPR032675
Pfam
PF13855
543 598 56 1.70E-07
IPR001611
PRINTS
PR00364
562 578 17 6.20E-11 –
SUPERFAMILY
SSF52058
654 862 209 1.19E-28
IPR032675
Gene3D
G3DSA:3.80.10.10
667 838 172 1.30E-08
IPR032675
PANTHER
PTHR23155:SF554
725 849 125 5.20E-115 –
PANTHER
PTHR23155
725 849 125 5.20E-115 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of
GO:0043531
Molecular function ADP binding Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate.
Subterm of

Genome browser

LORE1 insertions 14

Expression data

Expression pattern

Expression pattern of Lj6g3v2218110.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj6g3v2218110.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.