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| Field | Value |
|---|---|
| Gene ID | Lj6g3v2275070 |
| Transcript ID | Lj6g3v2275070.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g26900, mitochondrial-like [Glycine max] gi|356515016|ref|XP_003526197.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 20 | 20 | 6 | – | |
| Phobius | 1 | 9 | 9 | – | – | |
| Phobius | 1 | 25 | 25 | – | – | |
| PANTHER | 1 | 102 | 102 | 3.20E-60 | – | |
| PANTHER | 1 | 102 | 102 | 3.20E-60 | – | |
| Phobius | 10 | 20 | 11 | – | – | |
| Phobius | 21 | 25 | 5 | – | – | |
| Phobius | 26 | 102 | 77 | – | – | |
| ProSiteProfiles | 44 | 78 | 35 | 10.073 | ||
| Pfam | 49 | 75 | 27 | 4.60E-06 | ||
| TIGRFAM | 49 | 77 | 29 | 1.80E-04 | ||
| Pfam | 78 | 102 | 25 | 1.60E-06 | ||
| TIGRFAM | 78 | 102 | 25 | 1.60E-05 | ||
| ProSiteProfiles | 79 | 102 | 24 | 6.27 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj6g3v2275070.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v2275070.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.