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LotjaGi1g1v0001300.1

Overview

Field Value
Gene ID LotjaGi1g1v0001300
Transcript ID LotjaGi1g1v0001300.1
Lotus japonicus genome version Gifu v1.2
Description Protein kinase; TAIR: AT2G17220.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q9SII6|PIX13_ARATH Probable serine/threonine-protein kinase PIX13; TrEMBL-Plants: tr|C6ZRU2|C6ZRU2_SOYBN Protein kinase; Found in the gene: LotjaGi1g1v0001300
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:442942..446122) extracted from Lotus japonicus Gifu genome v1.2.

TGAAGGTTTCTCATTTGACTGAGTGCACGTTATTCATGTTATCATTCTTGCTTGCGTTAAAGTTTTGCCTTTCACCGTGT GCAAAACATTTCTTTTCTTGACTTGGTGTATGTAAAGAAAGACTGATAAGAGCATCTCCGCTGCATAGTTGCTAGTTGGA TTGCTTAAAAACTATTTTGGTGAGTCCAGACTGACACATTGGATTTAAGCAACCCAAACAGAATTCGCTCCAACCACGGT TGCTTAGTTTACTTTTAGTTGAGTCCCATTATACCTCTTATATTTATATTATTTTAAGATAACACTATACAAGTACATGA ATGAAAGAGAAAATACGATTTTTTAGTCAAAAAGTAAGGAGAGAGAAAATAAGCAACCGTTGCTTAAATTTAAGCAACCC AACTGCCACGTTATGTTGCTCCAATGTTGCTCCAAAATAAGCAACATTGCTTAAATTGCTAACTGGATTTAAGCAACCCT CATTGGAGAGGCTCTTATTGAATAGAAAAGCTAACTTCAATTATTGAAGAGAAATTAAAGCAAAAAGAGAAAAAAAATTA AAGAAGAGGTATATGGGTTGAAGAAGAAGATTGGAGTTGAACTTGGAACACAAGAACAAGACCAGGCACACCCTGCCCTT CTTCAGAGGAAAGTGGTAGATAGATTGATTGATTCCAATGGGGAATTGCTGGGCTTCTCCATCTAACAATCCAACCGGAA CAGGTAACCTTAAATAATTGGTATTAACAACTTTGTTAATTGTTTGCTTGTTCAATTTTGTTTTGAAGATTTATTCATCT GATTTCTCAATCAATTGTGTCTGTGTTTGTATTTGTGTATGTAGCCCCTCCTTCACCTGGGGGGACATCCCAGACCCAGT TTCAGTCCCAGACAACTACTACCACCAACAGCAGCTATACTACTACTACTACTACTACTACCTCTTCTGGAAGTGGGAGC AGCTCCATAAGCAAGTTCTCTGTGAGAAGTGGTGATCCTGCTGCAGGTCCAGGTGGTCAGATCTTACCTACCTCAAATTT GAGGATCTTTACTTTTGCGGAGTTGAAGGCTGCAACTAGGAATTTCAGAGCTGATACAGTGCTTGGGGAGGGAGGTTTTG GAAAAGTTTTCAAGGGTTGGATTGAAGACAGGGCACCTTCAAAGAATGGAAGTGGCACAGTCATTGCCGTCAAAAAATTG AACTCGGAAAGCTTACAAGGAATTGAGGAGTGGCAGGTAATTAATAGAGAACACAATCAAATCAATCCTTCAATTAATAT ATTGTAGCAGAATGAATATATTGTTTCTTAACTTCAGTATTCAGTTAACTGCATTCCTGAACAATTTAAGGTCTAATATC TCATATAAAACTCTTGTAATTTGTGTCTGGAATTGTAATCATTAAGACTGATCAGCAATAGCATCCTTGTTTTCAATTTT GCTGGTACAGTACTAATGGTTGGTTCATGTATGTGAATGTGGTGCAGTCAGAGGTACATTTTCTAGGACGCATTTCTCAT CCTAACTTGGTTACACTGCTGGGATACTGTTTGGAGGAAACAGAACTTCTTCTCGTCTATGAATTCATGCAGAAGGGCAG TTTGGAAAATCATCTTTTTGGAAGTGAGTGCTCAGTCATTGCCAAGTTTATAAATTCAAACATGAAATGCAATCAACAAA AGCTACATTATTTTAATTTAATTGTATAGGGGGATCTGCTGTCCAACCACTACCTTGGGAACTCAGGCTTAAGATTGCAA TTGGAGCAGCTCGTGGCCTTGCATTCCTGCATTCATCCGAGAAAGTAATTTACAGAGATTTCAAGGCCTCCAATATATTG CTTGATGGGGTGAGTTCCATATATGACACATACATAGCTACTTAGCACAATAATGCATCTGTTACATATCATGATGACAA ATTGCATGTTTCACCTATTTTTTATCTACAATTTAATGTCATAAATCATGTTAGTGTAGAAAATATTATTGAAGGCACAA CTCAAATTAAGTTCCATTATTGTTGTGATGGTACAGTCCTATAATGCAAAGATATCAGACTTTGGGTTGGCAAAACTGGG TCCTTCAGCTAGTAAATCCCATGTGACAACAAGGGTGATGGGCACATATGGTTATGCGGCTCCTGAATATGTGGCCACAG GTAATCAATCTCTCATTTGCATTAATTTTATTAATTAAAGTAGTCCATTCCACCTTGTTGATTGACATATGCAAATGCAA ATGCAATAATGCAGGGCATTTATATATGAAGAGTGATGTGTATGCGTTTGGAGTTGTTTTGATTGAGATACTAACAGCCC TACGAGCACTTGATCCGAACCGTCCAAGCGGGCAACATAATCTAACAGACTGGGTGAAGCCATACCTGCAGGATAGAAGA AAATTGAAGAGGATAATGGATTCAAGTTTGGAAGGAAAATATCCATCCAAAGCTGCATTTCGTATAGCTCAGCTAGCTTT GAAATGCCTTGCATCTGAGCCCAAACACCGGCCATCAATGAACGAAATGTTGGAGAGCTTAGAGAGAATTGAAGCAGCCA GTGAGAGACCTGTGGAATCCAGATTCCGGTCTACTCATTCTACACTTGCTAATGCTAGCCACCAGGCTGTACACCACCGT TCTCCACTTCATCATCTAAAGCATCAAGTAAGGGTGTGAGAGGGCCTTAATTGGTTGTGTTATTTATCTATCCATTCAAC ATTTTGCTTGTTGTTCATGTTGTATTCTTAGGACTCAAGTAGATATGAGATTTGTGCTAGGCTGCCAAATCATATATTAT TGTTGTTGGACTGTTGGTGATGTACAGAGTTGTTCTTAAAGCTAAATTGGTGTTGTAGGAGGGATTTTAATCATTACTTT AATTTATACAGTCTTGCCTTTCTATTACTAGAATCACACACTTTGGATCTCAATCAAAGTCACAAGTGATGACCACACCT TGACCCCATCCCCCCCTCCTGTAATTTTAATAATTCATCTGAAATCATTTTTCCTTTACCAATTGGATTTCACCAAATTG TCCTAAAAGATTTGTTTCTTTATAAATGTATCCAAATATATTCATTTCACTTTCAACTCACATTTACCATAATTATAAAC ACTAATGCTTTATGACACGACATTTTTTTATGCACACACCATGCACGATTTGTTCTATTTC
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0001300.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGGGAATTGCTGGGCTTCTCCATCTAACAATCCAACCGGAACAGCCCCTCCTTCACCTGGGGGGACATCCCAGACCCA GTTTCAGTCCCAGACAACTACTACCACCAACAGCAGCTATACTACTACTACTACTACTACTACCTCTTCTGGAAGTGGGA GCAGCTCCATAAGCAAGTTCTCTGTGAGAAGTGGTGATCCTGCTGCAGGTCCAGGTGGTCAGATCTTACCTACCTCAAAT TTGAGGATCTTTACTTTTGCGGAGTTGAAGGCTGCAACTAGGAATTTCAGAGCTGATACAGTGCTTGGGGAGGGAGGTTT TGGAAAAGTTTTCAAGGGTTGGATTGAAGACAGGGCACCTTCAAAGAATGGAAGTGGCACAGTCATTGCCGTCAAAAAAT TGAACTCGGAAAGCTTACAAGGAATTGAGGAGTGGCAGTCAGAGGTACATTTTCTAGGACGCATTTCTCATCCTAACTTG GTTACACTGCTGGGATACTGTTTGGAGGAAACAGAACTTCTTCTCGTCTATGAATTCATGCAGAAGGGCAGTTTGGAAAA TCATCTTTTTGGAAGGGGATCTGCTGTCCAACCACTACCTTGGGAACTCAGGCTTAAGATTGCAATTGGAGCAGCTCGTG GCCTTGCATTCCTGCATTCATCCGAGAAAGTAATTTACAGAGATTTCAAGGCCTCCAATATATTGCTTGATGGGTCCTAT AATGCAAAGATATCAGACTTTGGGTTGGCAAAACTGGGTCCTTCAGCTAGTAAATCCCATGTGACAACAAGGGTGATGGG CACATATGGTTATGCGGCTCCTGAATATGTGGCCACAGGGCATTTATATATGAAGAGTGATGTGTATGCGTTTGGAGTTG TTTTGATTGAGATACTAACAGCCCTACGAGCACTTGATCCGAACCGTCCAAGCGGGCAACATAATCTAACAGACTGGGTG AAGCCATACCTGCAGGATAGAAGAAAATTGAAGAGGATAATGGATTCAAGTTTGGAAGGAAAATATCCATCCAAAGCTGC ATTTCGTATAGCTCAGCTAGCTTTGAAATGCCTTGCATCTGAGCCCAAACACCGGCCATCAATGAACGAAATGTTGGAGA GCTTAGAGAGAATTGAAGCAGCCAGTGAGAGACCTGTGGAATCCAGATTCCGGTCTACTCATTCTACACTTGCTAATGCT AGCCACCAGGCTGTACACCACCGTTCTCCACTTCATCATCTAAAGCATCAAGTAAGGGTGTGA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0001300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MGNCWASPSNNPTGTAPPSPGGTSQTQFQSQTTTTTNSSYTTTTTTTTSSGSGSSSISKFSVRSGDPAAGPGGQILPTSN LRIFTFAELKAATRNFRADTVLGEGGFGKVFKGWIEDRAPSKNGSGTVIAVKKLNSESLQGIEEWQSEVHFLGRISHPNL VTLLGYCLEETELLLVYEFMQKGSLENHLFGRGSAVQPLPWELRLKIAIGAARGLAFLHSSEKVIYRDFKASNILLDGSY NAKISDFGLAKLGPSASKSHVTTRVMGTYGYAAPEYVATGHLYMKSDVYAFGVVLIEILTALRALDPNRPSGQHNLTDWV KPYLQDRRKLKRIMDSSLEGKYPSKAAFRIAQLALKCLASEPKHRPSMNEMLESLERIEAASERPVESRFRSTHSTLANA SHQAVHHRSPLHHLKHQVRV
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 74 74 - –
MobiDBLite
mobidb-lite
1 62 62 - –
PANTHER
PTHR45621:SF65
9 392 384 1.1E-185 –
PANTHER
PTHR45621
9 392 384 1.1E-185 –
Gene3D
G3DSA:3.30.200.20
73 179 107 2.7E-32 –
SUPERFAMILY
SSF56112
75 375 301 3.28E-79
IPR011009
ProSiteProfiles
PS50011
96 378 283 40.329
IPR000719
Pfam
PF07714
99 375 277 3.5E-49
IPR001245
CDD
cd14066
102 378 277 7.23761E-95 –
ProSitePatterns
PS00107
102 133 32 -
IPR017441
Gene3D
G3DSA:1.10.510.10
180 402 223 3.2E-60 –
ProSitePatterns
PS00108
224 236 13 -
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0001300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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