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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0012400 |
| Transcript ID | LotjaGi1g1v0012400.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like kinase; TAIR: AT1G66920.2 Protein kinase superfamily protein; Swiss-Prot: sp|P93604|LRK10_WHEAT Rust resistance kinase Lr10; TrEMBL-Plants: tr|A0A072VEV8|A0A072VEV8_MEDTR Receptor-like kinase; Found in the gene: LotjaGi1g1v0012400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:1553710..1555919) extracted from Lotus japonicus Gifu genome v1.2.
TATTAAAATACATAGCATCAATATTTTTACAGCTAGCATAGCATTCTGTTGAATTTTAAATACAATATTGTATATCGTCT TGTTTCTCGCCTCTTTCCTTCAGGGAGAGATTAGATGGAAAGCACATGATATAAATTAGACAAAAAGTGTCAAAGTGATT TGCTAGCTATATCCCAGCTCGTTCACCTTGATGATGACAATGCTAGCACTGCTAATGCTGTTGCTACTCATGAGTGTGGG AAATGGTCACAATGACACCTCCATCCAATGTCCCTTCCGTCTATCTTATGCAGATAACAGCACTGATCCGATGATTGAAT TTCCAGCACTTCCAGTCCCAGTAAGGTTCCTCGTCACCGAATTAGATTGCGAATTACGAATGATGCTTCTATCTTATCCC GAGAACTGTCTTCCTATGTTATTTGTAAGATACAACTTCTCATTATTTTACCCTTTACAATACGATTCGTCCTTAATCCA GAATATTACTTTCTTCAATTGCTCTTCACTTGGAGACATGTTGTCTTGCCCAGTTTTTGTTGTTGAGTCTAGCCAAAGTG TCCTTGATTTGAACCTTCAGTACTGCACCAAAATGTTTGATCAAGTTTTGCCACTATCAACATTTTATTTACAGCAAAAC TTAATCCCATTGGAATGGTCGGAAACAGATTTTGATAGTGGATGCTTAGAATGTAAGCACAAGTCAAAAAAGAAGATGCC AGTGTCCGCAATTTTGGCCGCTGCAGGTGACTGAACAGACATAATTTTGTTTGATCGTTCAATCATGATTTTATTTCATT ATGTAGATGACATTTTCTTTTCGAAAATTTGCAGGTGTAGTTGTTGGTTCAACTTTGCTGGCGTTTCTGCTCGGTGCCCT CTTTCGAATATATCGGTATTATAGGGCGAAAGGAGAAGACGATACAAGAGTCGAAAACTTTTTGAAGGATTACAGGGCTT TGAAGCCAACCAGATTCTCCTATGCTGATATCAAGAGAATCACAAACCTGTTCAAAGAAAAGCTAGGTGAAGGAGCTCAT GGAGCTGTCTACAAAGGTAAATTATCCACAAAAATTCTGGTTGCTGTGAAGATCCTCAACAACACTGAGGTAGATGATGG GACAGAGTTCATCAATGAAGTAGGAACCATGGGAAAAATCCACCATGTCAATGTTGTTCGCTTGCTTGGCTACTGTGCTG ATGGGTTTCACAGAGCTTTAGTTTATGACTTTTTCCCAAATGGGTCACTGCAAAATTTCATCTCTGCACCAAACAACAAG GATAATAACAACTTCCTTGGATGGGAAAAGTTGCAAGAGATTGCTATAGGCATAGCCACAGGAATTGATTATCTTCACCA AGGCTGTGATCAGAGAATTCTTCACTTTGATATCAATCCTCATAACATCTTGCTTGATGACACTCTCACTCCGAAGATTA CTGACTTTGGTTTGGCCAAGCTGTGCTCCAAAAATAGAAGCACTGTGTCCATGACTGCAGCCAGAGGAACACTAGGCTAC ATGGCACCTGAAGTTTTTTCTAGAAACTTCGGCAACGTGTCTTACAAGTCTGATATCTACAGTTATGGGATGCTATTGCT AGAGATGGTTGGAGGGAGAAAGAATATTGTAAACAACACTACAGGTCAAGAAAATAATAATGTTCAAGTTCTGTATCCAG ATTGGATACATGGTTTGGTTGAAGGAAGAGACATGCATGTCCCTATTGATGATGATCATGAAGAGGGAAATTTTGAAATT GCAAAGAAACTAGCGATTGTGGGACTTTGGTGCATTCAGTGGCATCCTATGCATCGTCCATCCATGAAGACTGTGATGCA GATGCTCCATGGAGAGGGAGATAAGTTAAAAGTTCCCACCAACCCTTTCGAGCCAAAAGCTTCAGCTAACACAAGCACTA GTAGTACTATTGTTGCTGCAAAACGTCTGAATTTGGAGCTGGAAGTGATTCAAGAACAAGATTAGATTTAACACAGGTTT TTATTAATTAGTTGGCACTTTTTAGCAATGTAGTTTAGACGACAAAGACCATGAATTTATGGGTAACGTAATTTCAGTTG TTTTTTAAGAAATATACTAGTTTTATACACCTTTTTGTCCGGATATGAACCATGGACAAATGCTTATGACTCAAATCTGA TCATAACATTGATAGATTAAATGCTTATGACTCAAATCTGACAATTTCAT
CDS sequence (LotjaGi1g1v0012400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGACAATGCTAGCACTGCTAATGCTGTTGCTACTCATGAGTGTGGGAAATGGTCACAATGACACCTCCATCCAATG TCCCTTCCGTCTATCTTATGCAGATAACAGCACTGATCCGATGATTGAATTTCCAGCACTTCCAGTCCCAGTAAGGTTCC TCGTCACCGAATTAGATTGCGAATTACGAATGATGCTTCTATCTTATCCCGAGAACTGTCTTCCTATGTTATTTGTAAGA TACAACTTCTCATTATTTTACCCTTTACAATACGATTCGTCCTTAATCCAGAATATTACTTTCTTCAATTGCTCTTCACT TGGAGACATGTTGTCTTGCCCAGTTTTTGTTGTTGAGTCTAGCCAAAGTGTCCTTGATTTGAACCTTCAGTACTGCACCA AAATGTTTGATCAAGTTTTGCCACTATCAACATTTTATTTACAGCAAAACTTAATCCCATTGGAATGGTCGGAAACAGAT TTTGATAGTGGATGCTTAGAATGTAAGCACAAGTCAAAAAAGAAGATGCCAGTGTCCGCAATTTTGGCCGCTGCAGGTGT AGTTGTTGGTTCAACTTTGCTGGCGTTTCTGCTCGGTGCCCTCTTTCGAATATATCGGTATTATAGGGCGAAAGGAGAAG ACGATACAAGAGTCGAAAACTTTTTGAAGGATTACAGGGCTTTGAAGCCAACCAGATTCTCCTATGCTGATATCAAGAGA ATCACAAACCTGTTCAAAGAAAAGCTAGGTGAAGGAGCTCATGGAGCTGTCTACAAAGGTAAATTATCCACAAAAATTCT GGTTGCTGTGAAGATCCTCAACAACACTGAGGTAGATGATGGGACAGAGTTCATCAATGAAGTAGGAACCATGGGAAAAA TCCACCATGTCAATGTTGTTCGCTTGCTTGGCTACTGTGCTGATGGGTTTCACAGAGCTTTAGTTTATGACTTTTTCCCA AATGGGTCACTGCAAAATTTCATCTCTGCACCAAACAACAAGGATAATAACAACTTCCTTGGATGGGAAAAGTTGCAAGA GATTGCTATAGGCATAGCCACAGGAATTGATTATCTTCACCAAGGCTGTGATCAGAGAATTCTTCACTTTGATATCAATC CTCATAACATCTTGCTTGATGACACTCTCACTCCGAAGATTACTGACTTTGGTTTGGCCAAGCTGTGCTCCAAAAATAGA AGCACTGTGTCCATGACTGCAGCCAGAGGAACACTAGGCTACATGGCACCTGAAGTTTTTTCTAGAAACTTCGGCAACGT GTCTTACAAGTCTGATATCTACAGTTATGGGATGCTATTGCTAGAGATGGTTGGAGGGAGAAAGAATATTGTAAACAACA CTACAGGTCAAGAAAATAATAATGTTCAAGTTCTGTATCCAGATTGGATACATGGTTTGGTTGAAGGAAGAGACATGCAT GTCCCTATTGATGATGATCATGAAGAGGGAAATTTTGAAATTGCAAAGAAACTAGCGATTGTGGGACTTTGGTGCATTCA GTGGCATCCTATGCATCGTCCATCCATGAAGACTGTGATGCAGATGCTCCATGGAGAGGGAGATAAGTTAAAAGTTCCCA CCAACCCTTTCGAGCCAAAAGCTTCAGCTAACACAAGCACTAGTAGTACTATTGTTGCTGCAAAACGTCTGAATTTGGAG CTGGAAGTGATTCAAGAACAAGATTAG
Protein sequence (LotjaGi1g1v0012400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMTMLALLMLLLLMSVGNGHNDTSIQCPFRLSYADNSTDPMIEFPALPVPVRFLVTELDCELRMMLLSYPENCLPMLFVR YNFSLFYPLQYDSSLIQNITFFNCSSLGDMLSCPVFVVESSQSVLDLNLQYCTKMFDQVLPLSTFYLQQNLIPLEWSETD FDSGCLECKHKSKKKMPVSAILAAAGVVVGSTLLAFLLGALFRIYRYYRAKGEDDTRVENFLKDYRALKPTRFSYADIKR ITNLFKEKLGEGAHGAVYKGKLSTKILVAVKILNNTEVDDGTEFINEVGTMGKIHHVNVVRLLGYCADGFHRALVYDFFP NGSLQNFISAPNNKDNNNFLGWEKLQEIAIGIATGIDYLHQGCDQRILHFDINPHNILLDDTLTPKITDFGLAKLCSKNR STVSMTAARGTLGYMAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNIVNNTTGQENNNVQVLYPDWIHGLVEGRDMH VPIDDDHEEGNFEIAKKLAIVGLWCIQWHPMHRPSMKTVMQMLHGEGDKLKVPTNPFEPKASANTSTSSTIVAAKRLNLE LEVIQEQD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_NEGATIVE | 1 | 20 | 20 | - | – | |
| SignalP_EUK | 1 | 19 | 19 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 21 | 21 | - | – | |
| Phobius | 1 | 4 | 4 | - | – | |
| Phobius | 1 | 19 | 19 | - | – | |
| Phobius | 5 | 14 | 10 | - | – | |
| Phobius | 15 | 19 | 5 | - | – | |
| Phobius | 20 | 177 | 158 | - | – | |
| PANTHER | 29 | 566 | 538 | 1.7E-250 | – | |
| PANTHER | 29 | 566 | 538 | 1.7E-250 | – | |
| Phobius | 178 | 202 | 25 | - | – | |
| TMHMM | 180 | 202 | 23 | - | – | |
| Phobius | 203 | 568 | 366 | - | – | |
| Gene3D | 217 | 318 | 102 | 2.0E-25 | – | |
| SUPERFAMILY | 224 | 523 | 300 | 1.48E-71 | ||
| ProSiteProfiles | 243 | 538 | 296 | 36.343 | ||
| Pfam | 246 | 521 | 276 | 9.9E-47 | ||
| ProSitePatterns | 249 | 271 | 23 | - | ||
| Gene3D | 319 | 537 | 219 | 5.1E-52 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0012400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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