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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0013000 |
| Transcript ID | LotjaGi1g1v0013000.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Uridine kinase; TAIR: AT4G26510.1 uridine kinase-like 4; Swiss-Prot: sp|O65583|UKL4_ARATH Uridine kinase-like protein 4; TrEMBL-Plants: tr|A0A0B2QUU5|A0A0B2QUU5_GLYSO Fructose-bisphosphate aldolase; Found in the gene: LotjaGi1g1v0013000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:1661643..1667145) extracted from Lotus japonicus Gifu genome v1.2.
GTGAATTTTGAACATCAGTTGTGGATTTGATGGGGTCTGCTTCTGAGGTTCATTTTTCTGGATTTCACATTGATGATGGA TTGGAGAGAAGAAAGGGTGGCGCCGAGCAACCGACTACTTCGGCAACTGACATGTATAAACAGCCTTTTGTCATAGGTGA GTGTTTATTTTCTCTGCATCACAAGCTGCCAATGTAGTTGTCATGAAGATTACCTTTCTGTCTGTTTATGTTCTGGAACT CAATGGTGGTGCATTTACTTTGTCTCGGGTATGCTCTCATGTATATTAAAAGGACACTAAATATAGGAAAGATATTTATC CATACTCATTCCACCTCCACCTCTAAGGAGAGAGATTATGAATATAAGATGCATGAGTGACAAATATAATGAGGGATATG ATAGGAAAAGAAGAGGGAGATACGGAGAAAAATTCAGTAGAAATGAGATGGAAGTGTGTGTCTCTGTCAATATATGAAAG TTGCTAAATATGCTTGTCTTACTGGTTTGGATGTTTGTGGATTTCACTGTTCTGCTGTGGCAGAGAAAATGTCAGTAGCC TTGTTTTTTTTTTCTTCACTCCTCACTCTTGGATGCGGTTCAAATGAGCCATTAGCTTTTTTGTTTCAGCGTACACGAAC AAACTTACCATTGAAGACTATCTGAATTTAACGCAATTTTGTATTGGTTGGAGCAATGGAATTTCTTTAAACTAGAGCTT AGCTCCACTAGAAATAACCTGCTCAGAATTCATACGTTCTGTGAGAAGAAGTCACGGTCATCTTCTTGTGTAAACTTAGA AAAATTTCCATGAAATGTAAATACTTCTCATTTGATGTAATTTTTAATTATTTTTTTCGTTTGTGCATATTGCAGGTGTT GCTGGGGGAGCAGCGTCTGGCAAGACAGCAGTTTGTGATATGATTATTCAACAGCTTCATGATCAAAGAGTTGTACTTGT TAATCAGGTGATGAATTCTTTCTATAAATTTATTGATGGTGAAATTGTGAGCATGTATAGCAATTTAGACTCAGGAAGAC ATTGAGGATAAGTGAAGAACATTTAGTTTTACAGAAAACAGAACTAATAGTTAGTGCTCCAAGCCTTATAAGCATTCAGT TCCCACCTTAATCTTAATCCCCTTGGTTTTGTATGGTTTTATTTCCTTATATCTGAAGAATCTATTGGAATGATCCTATC CTATCAGCTTTCTTTGGTATTTTCATGGTAACATTGACACTTTGTTAGCTACCATTTATAACACCAAAATTCCTACACTT TTCTGTTTATTTACTCAATTAGATTTAGTATTCTGGCGTTCTGACCTCCTCTGTTATCATGAACGTATACGTGTTTCTCT CAATTTTCAAAATACCAAATTGCCAATAACTTTCTCTATCAAAAGAGGTCTACATTTTGAAGATATGATGCACCGTTGTT TTGGTGATATAGAAAAAGATTTCTTACTCTCCATTTAATAAGTTGTTTGTCACATTTTGCTTTTTCTATTTCGACTTTTG TCTTCTTTGATCGAAGTTTGTCACATTTCTTACTCTCCATTTTATAAATTCTGATTGATGTTTCTTTATGTACTCATGAC GATGATATGTTTAGCATAATGAAGGGTTTCGTTTATTTACAACAGGATTCTTTTTACCATAGTTTGACTGAGGAGGAACT TACAAGAGTACAAGATTACAACTTTGATCATCCTGGTCAGTTCAAGTGTACTCATTGGTCTCTCATTATTAGTGACTGAC TTTGTATTGATATCGTGAGAATTTTTTTAAAGGTTGAATTTGTGTTCCGTTTCAATGATGTGACTCAATTACCTAGCTAG GAAAATGAGTAGCTCAAGCCACACAGTAGTATATAATACACCTGAAATGTGATAAGGCTTTAATCTGGAAAATTTGACAA TTGGATTTTCCTAATGCAAACACAAATGGTGGTTCTTGTACTGTGTAGCTCCTTGCGCTAACTCTAATAAATGTTGCTGA TATCCTCAGAAGCTTTTGATACTCAACAATTGCTATGCGTCCTGGACAAGTTGAAGCGTGGCCAAGCAGTAGATATACCG AAGTATGACTTCAAGGGTTATAAGAATGATGTGTTTCCAGCAAGAAGGGTATCTTGAATTTTCATTCTATTCATAATTTT ATTCCTTTTTCTCAAGATGCATAAAGGCCAAGATTGAAATGGCCTTCTTTTTTCGAGTTTTTTATTATTATGCTAAACAT TACTCCCTCCGTCCCCATATATAAGTCACTTTTTTAGAGTTTTTTTAGTCCCAATATATAAGTCACTTTATAATACCAAT GAAGCATTTAATACATTTTTTCCAAACTTACCCTCATATTTAATATGAAAGAGGTAATGTAGTTTTGAAAAGAAATTAAT TTGGAGAGAGAAGCTGATGGGTAATCTAGGAAACTCAATAAAACTTTTTACAAATTTAATGCTAACAACATCTTTTCTTA ATCCTAGAGAATTAGGTAAAAGTGACTTATAAATGGGGACGGAGGGAGTAGTTTTTTATTGCAAAGAGAAAGTCTAAAAT ATATTTACATGATAATGGTTTTCAAATTCGGATTTGAATGATTTGGTGCACTAATGATTACCAAATCATGCAATTCATGA TTCTTCTGGCTATTCTCTCCACCAGAAGGCAAATATATCTGGAATTAGATTTTAGTCATGCTTCCACTTTATGTTGGTTT AATTTGTTCAATTTTTTTTCAGTTAAACCCTGCGGATGTAATAATTTTGGAAGGCATCCTGGTTTTCCATGATCCTCGTG TCCGAGCATTGATGAATATGAAGATATTTGTTGACACAGGTCGCTTGTTATTTTTGTTCCCATTTAACTTGTATATCTTA TTATGTTGTATGCTTTCTGTGGTATTTCTTATTCATATTGGATCTGTTGTCTTTTTCATTTTCCTTTTGATCTCATGGTC TTTTATTTCTTCATAATTCACATTGTGATAGAGGAAAATAAATGTTCTTCTTCAGGTGCTAGTGATGCTATATGTTCATT GTTTCCCCCCACATTTATTGGCTCCTTTATATTAGCAGTTCCCTATATCTTGCCTTCTAGTTATTTCATAAGCTTGTACA TTTTTTGTCTTTGTTGCTCAACTAAGTTAGGCTGTCACTTTACATTGTAAAATGTCCAGTGCAGATGCTGATGTTCGTCT GGCAAGAAGGATTAAGCGTGATACAGCTGTGAATTCTCGCGATATTGGAGCGGTCCTTGATCAGGTAGCAACTTTCAACC GCACTACTTTCACCGTCTTTCCCCTCATATTTCCTACATTCACTGCATTTCAAGGCTTGGAAATGTCATTTTAGTTCATG CTGCTGATCATTTATTATGCAAGTACCTTGATTAGGAAACCTGTCATTATTCAGTTTTTATAGAATTAAATCTTCAGGGA TTTATGTGTCATGTATGTGCTTATGATAGTACTGATTAAACTAATGTATTCTATGTTTGTTTTTTTACTACATTTTAGTA GCTGATTTTTCTGTTACATATTGGTTGCAGTATTCTAAATTTGTGAAGCCAGCTTTTGATGACTTTATCCTTCCAACAAA GAAGTATGCAGATATCATTATACCCCGTGGAGGAGATAATCATGTGGCTATTGATTTGATTGTACAACACATTCGTACAA AGCTTGGTCAGCATGACCTGTGTAAAATATATCCTAATTTATATGTCATTCAGTCTACTTTTCAGGTACCCCTTTATTGC TGGTTATCTCCTTTCATCTAAAGCTAAAAAATATGTTTGCTACTGAAAGTTGAATAGTAACTGTAATTGCTGCTATACAG ATACGGGGTATGCATACCCTGATACGTGATTCTCAGACAACGAAGCATGACTTTGTATTTTATGCTGACCGTTTGATTCG TTTGGTATGTGAATAAGGTTCCTTTGTTGCTTTTTGATTTTAGTGGTGGTATGACACTTTCTTAGTAGTTTTCACAACAA TTTCCTCACTTGACCAGGTTGTAGAACATGGGCTCGGGCATCTTCCATTTACAGAAAAACAAGTAATCACCCCTACTGGT AAGCTGTTCTCTTCTAAAATGATAATTATCCTGGTTTGTATTATTTGTATCTCTAAGGGTGCATCATTCTCTGGCATATT ATTGTACTTGAAAGACATGTTCAATGTTTTGTTGTTCATGGTGTTAATTGCTGTAATTGTGATACTAACAACTTCTCCAT TTCTTTCTTCCTTTGTGTTGCTGATATTCTTGTTCAGATATTTACACAATAGAATTAGTTGTTTCATGCCTGATCCTTTT TATGGTAACAGCTGATTCTTGTCCTTCAATGCAGGGTCTGTATACAGTGGTGTGGATTTTTGTAAGAGATTGTGTGGTGT CTCCATCATCAGGAGGTATTGGTCTATTCAAAAGCAGAAGTCACTGGAGCAAATGATTAAACATTGGCATCTTTGCTTCA AACTAGCAACTAAAAGATTTTCTCTGAAACCTCATTAAACAATTCCATAACTAAAGAGAAAGATCTATTACGGGTTAAGG TTTAGAATCGTCAAAATTTTTAGATTTCATATAGTGGTAATTGTTTTCCTATAAACTATTATCTAAATCCATCCCCCATC ATACTTTAAGAGACTAGTTCTTTTTTCCTTACTATAGCCGGTTTGATGTGAACCTATGATCACTGCATTTTTTTTAAATA AATGCAATGCATTGGAAAGAATACTCTGTCCTTAAATTTGATACATTATCTAATTTCAGTGGGGAAAGCATGGAAAATGC TTTACGAGCCTGCTGCAAAGGTATCAAGATTGGGAAAATTCTTATTCATAGAGAAGGTGACAATGGTCAGCAGGTTTGTC ATCTGCATGTATGCTTGAGTATATATCTGTGTTTGTTTCATTTATCAATATCTAACTTATCCTTTGATTATTGAGCAGCT AATATATGAGAAGTTGCCTAATGACATCTCAGATAGGCATGTGTTACTGTTGGATCCCATCTTAGGAACAGGTTTATATA TTTTACATTAAGAGTGAACTGAGAACTTGATATTTGATTTTTTGGTTTTAGTTTAGATTAACCTTAGACTATCTTCATCT TTAGGTAATTCGGCTGTTCAAGCAATTTCTTTACTTCTACAGAAGGGTGTACCTGAGTCCAACATTATATTTCTCAATCT CATATCTGTAAGTTACTGATATAATTATTACCTCTGTATATCTTGCCATTTTCATTATTTTCTGTTGCTTCTTTATCTGT ATCCGATGCTGATGATGTTCTATATGTGGTCGCATCTTGCCAGGCACCTCAAGGTTTGCATATGGTCTGCAAAAGCTTTC CGAGGATAAAAATTGTGACATCTGAGATTGACACCGGTTTGAATGAAGATTTCCGCGTCGTACCTGGGATGGGTGAGTTT GGGGATAGGTACTTTGGAACAGATGATGATGACCAGCTGGTGGTGGCTCCTTCTCAGCAGTGA
CDS sequence (LotjaGi1g1v0013000.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGTCTGCTTCTGAGGTTCATTTTTCTGGATTTCACATTGATGATGGATTGGAGAGAAGAAAGGGTGGCGCCGAGCA ACCGACTACTTCGGCAACTGACATGTATAAACAGCCTTTTGTCATAGGTGTTGCTGGGGGAGCAGCGTCTGGCAAGACAG CAGTTTGTGATATGATTATTCAACAGCTTCATGATCAAAGAGTTGTACTTGTTAATCAGGATTCTTTTTACCATAGTTTG ACTGAGGAGGAACTTACAAGAGTACAAGATTACAACTTTGATCATCCTGAAGCTTTTGATACTCAACAATTGCTATGCGT CCTGGACAAGTTGAAGCGTGGCCAAGCAGTAGATATACCGAAGTATGACTTCAAGGGTTATAAGAATGATGTGTTTCCAG CAAGAAGGTTAAACCCTGCGGATGTAATAATTTTGGAAGGCATCCTGGTTTTCCATGATCCTCGTGTCCGAGCATTGATG AATATGAAGATATTTGTTGACACAGATGCTGATGTTCGTCTGGCAAGAAGGATTAAGCGTGATACAGCTGTGAATTCTCG CGATATTGGAGCGGTCCTTGATCAGTATTCTAAATTTGTGAAGCCAGCTTTTGATGACTTTATCCTTCCAACAAAGAAGT ATGCAGATATCATTATACCCCGTGGAGGAGATAATCATGTGGCTATTGATTTGATTGTACAACACATTCGTACAAAGCTT GGTCAGCATGACCTGTGTAAAATATATCCTAATTTATATGTCATTCAGTCTACTTTTCAGATACGGGGTATGCATACCCT GATACGTGATTCTCAGACAACGAAGCATGACTTTGTATTTTATGCTGACCGTTTGATTCGTTTGGTTGTAGAACATGGGC TCGGGCATCTTCCATTTACAGAAAAACAAGTAATCACCCCTACTGGGTCTGTATACAGTGGTGTGGATTTTTGTAAGAGA TTGTGTGGTGTCTCCATCATCAGGAGTGGGGAAAGCATGGAAAATGCTTTACGAGCCTGCTGCAAAGGTATCAAGATTGG GAAAATTCTTATTCATAGAGAAGGTGACAATGGTCAGCAGCTAATATATGAGAAGTTGCCTAATGACATCTCAGATAGGC ATGTGTTACTGTTGGATCCCATCTTAGGAACAGGTAATTCGGCTGTTCAAGCAATTTCTTTACTTCTACAGAAGGGTGTA CCTGAGTCCAACATTATATTTCTCAATCTCATATCTGCACCTCAAGGTTTGCATATGGTCTGCAAAAGCTTTCCGAGGAT AAAAATTGTGACATCTGAGATTGACACCGGTTTGAATGAAGATTTCCGCGTCGTACCTGGGATGGGTGAGTTTGGGGATA GGTACTTTGGAACAGATGATGATGACCAGCTGGTGGTGGCTCCTTCTCAGCAGTGA
Protein sequence (LotjaGi1g1v0013000.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGSASEVHFSGFHIDDGLERRKGGAEQPTTSATDMYKQPFVIGVAGGAASGKTAVCDMIIQQLHDQRVVLVNQDSFYHSL TEEELTRVQDYNFDHPEAFDTQQLLCVLDKLKRGQAVDIPKYDFKGYKNDVFPARRLNPADVIILEGILVFHDPRVRALM NMKIFVDTDADVRLARRIKRDTAVNSRDIGAVLDQYSKFVKPAFDDFILPTKKYADIIIPRGGDNHVAIDLIVQHIRTKL GQHDLCKIYPNLYVIQSTFQIRGMHTLIRDSQTTKHDFVFYADRLIRLVVEHGLGHLPFTEKQVITPTGSVYSGVDFCKR LCGVSIIRSGESMENALRACCKGIKIGKILIHREGDNGQQLIYEKLPNDISDRHVLLLDPILGTGNSAVQAISLLLQKGV PESNIIFLNLISAPQGLHMVCKSFPRIKIVTSEIDTGLNEDFRVVPGMGEFGDRYFGTDDDDQLVVAPSQQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 18 | 462 | 445 | 1.5E-292 | – | |
| PANTHER | 18 | 462 | 445 | 1.5E-292 | – | |
| SUPERFAMILY | 31 | 232 | 202 | 1.39E-45 | ||
| Gene3D | 35 | 242 | 208 | 5.5E-63 | – | |
| TIGRFAM | 38 | 239 | 202 | 2.4E-69 | ||
| PRINTS | 39 | 56 | 18 | 2.5E-28 | – | |
| CDD | 41 | 239 | 199 | 3.09227E-102 | ||
| Pfam | 41 | 227 | 187 | 3.7E-43 | ||
| PRINTS | 69 | 80 | 12 | 2.5E-28 | – | |
| PRINTS | 114 | 129 | 16 | 2.5E-28 | – | |
| PRINTS | 171 | 181 | 11 | 2.5E-28 | – | |
| PRINTS | 185 | 196 | 12 | 2.5E-28 | – | |
| PRINTS | 207 | 220 | 14 | 2.5E-28 | – | |
| SUPERFAMILY | 242 | 459 | 218 | 1.57E-60 | ||
| Gene3D | 243 | 458 | 216 | 8.0E-86 | ||
| Pfam | 257 | 458 | 202 | 1.8E-74 | – | |
| CDD | 316 | 431 | 116 | 3.77879E-12 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Nucleoside metabolic process | The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (a ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleoside), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine). | ||
| Molecular function | Kinase activity | Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule. |
Expression pattern of LotjaGi1g1v0013000.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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