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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0028900 |
| Transcript ID | LotjaGi1g1v0028900.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Calcium-dependent kinase; TAIR: AT1G50700.1 calcium-dependent protein kinase 33; Swiss-Prot: sp|Q38868|CDPK9_ARATH Calcium-dependent protein kinase 9; TrEMBL-Plants: tr|G7K8K5|G7K8K5_MEDTR Calcium-dependent kinase; Found in the gene: LotjaGi1g1v0028900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:3450254..3453981) extracted from Lotus japonicus Gifu genome v1.2.
TCCATTTGGTGTCCAATTACCCGTCTCACAAATAAAATTGTGACATGTTATTAAAAAACTACCATGTAAGGTTACAATTG ACATCACACAATTTTATTGGTGAAAACATGGAAGAAAACATATATGATATATGTCATATCTAATAAAGTCCCAGCTGCAT CAATATCTTAGTAATATGTCACAAAAATCTCATCAAAATTTTTATATTATCTTATTAATATGTGACAAAATCTCATTGAT ATCTGCACCAGTACCTGAGTTATATGTGACAAAATCTCATCAATACTTCTTATTATCAGGCAATTCTACACACTTGGGAA AGAATTGGGGAGAGGCCAGTTTGGGGTGACTTACCTCTGCACTGAGAATTCAACTGGATTGCAATATGCTTGCAAGTCCA TTTCAAAGAGGAAGCTTGTTAGCAGAGCTGATAAGGAGGACATCAAGAGGGAGATTCAGATCATGCAGCATTTGAGTGGA CAACCCAATATTGTTGAGTTCAAAGGTGCCTATGAGGATAAACAATCTGTTCATGTTGTCATGGAGCTTTGTGCAGGTGG TGAGCTTTTTGATAGGATCATTGCCAAGGGCCACTACAGTGAAAGAGCTGCAGCTTCAATATGCAGACAAATTGTTAATG TTGTCCATATCTGCCATTTTATGGGTGTCATGCATAGGGATCTCAAGCCTGAGAATTTCTTGTTAGCTAGTAAGGATGAA AAAGCACTTCTCAAGGCCACAGATTTTGGCTTGTCAGTCTTCATTGAAGAAGGTACAATTTTTTATCCATTCACTGGTCT TTCTTGTTAATAGCTTGAAAAATTTAATATCTGTGGTTTCTGGTGCTATAAAGCTCTCGCTATGTGCGAGATTCAAGGAG GGGTCGGACCCACTTTGTGGATCTAATGTAGGCAGTCTTCCTTGCATTTGTGCAAAAAGCTGAATCCGCGACTTGAATCT ATGACCGCCAAGTCACATGGCAGCAACGTTACCATTGCACCAAGGCTCGCCCTCTAAAACTGTAGCATCATATTGAAATT TTAACTGCTGAAGTTTTTAGGGAAATTTGTGTACAATTTTCTGTCTAAAACTTAATCTACCTTTTTAGGCATATGGAGTT TTTTGGAGAAGTCTTGGAATTTTATTCTTTTCTTTCAGATCGAAATTTAATTTGTATAGTTTCTAATAGTGCATTGCCGA TACTAGTAATCAGTAGCCTGATTTGTGAAGAATTAGAAAGTTTGAGAACTCTTGAATTTGTTTTATGATCATTTTTTTAG CATGCTGATTTGAATAACTAACTTCATAAGGCTTCTTTTCATTATTCTTCTCTCCTTGTGCATGCATGTAGTTAATCACA TTTCAGTAACAATGCTTTTTTCAGATAGACTTCTTTACATTCAAGTTTGTACCTTGATTTATGTACTACTTTTTTTTTCT GTAAGTAGAAAGGAGTGTTCCATTATACAGTTGGTTATAAAGTACACTGGAAATGTACAAGCACGCAGACTAGTGCATGT TTGGAAATCATTCTATAATTGATTCTACGGTCGGAATCAACTTAAGGCAGGAGCTTTCAGAATTGATTCTGAGGAAAGCG AAGCTGATCCAAACATGGTCTTTCACTTTGTACTAAACTTTCTCTGTTTAATTCTTACCAGGAAAGGTGTATAAGGATAT AGTTGGCAGTGCTTATTATGTTGCTCCTGAGGTTCTGCGGCGTAGATATGGGAAGGAGATAGATATATGGAGTGCAGGAA TTATATTATATATCTTACTATGTGGTGTACCTCCATTTTGGGCAGGTATACATTGAGATTCTGATAATTTCATATTATGA TAATCATTTAGTACTAGAGGCTAGCTTTAGGCTTGACTAACTCTTTCCATAAAATATGTGTTGTAGAGACGGAAAAGGGA ATATTTGATGCCATATTGGAAGGTCATATTGATTTTGAAAGTCATCCATGGCCAAGCATATCAAACAGTGCTAAGGATCT TGTTCGTAAGATGCTTATACAAGACCCCAAGAAACGCATTACTTCTGCTCAGGTTCTAGGTAGGTTAATTTTAGCACGAT TGCTGAATTCTTAAGAATTTTCTTGCTGAATGCAATATAATTTCTTTACTAATTGAATCCATGTATTCTATAAATAATTA GAACACCCATGGCTTAAAGAAGGTGGAAATGCTTCTGACAAGCCAATAGACAGCGCGGTCCTGTCAAGAATGAAGCAATT CAGAGCAATGAACAAACTGAAAAAACTTGCCCTCAAGGTTAGTCCAGTCACAAGCTGCATTAAGAGACCACAATTTCCTT TTATGCTTAACTGCTTATTGTTACATGTGTCCATGGATGATGGATCAACAGTTAAACATAGAAAAAGCTAATTTTAAGCC AATGTCTATTTCAGTCAATAATTACACATTGAGAGACATAAATTATCACTCTAATGTTCTCACCATAACTCTAAATTCGT TAAACCTGTGTGCTATAGGGGTGTGTCTACCGAGTCAAAATAACTGAGTGGATTTTGAAAATTCTTTTAGGTCATTGCTG AAAATCTTTCTGATGAAGAAATCCATGGTTTGAAGGCAATGTTTACGAACATGGACACAGATAAAAGTGGTTCAATCACC TATGAAGAACTGAGGACAGGATTGCAAAGACTTGGCTCAAAGCTTAGTGAAGCTGAAGTGCGACAGCTTATGGATGCTGT AAGCTATTGTTGATTTACAAGATTTTTCATCTATTTTATTTTTCTTTAATATTTTGAACTGACACCCCTTTGCTTGAATT TAGGCTGATGTAGATGGAAATGGCACAATTGACTACATAGAATTCATCACTGCTACAATGCATAGACATAGGTTAGAAAA AGATGAGCACCTTTACAAGGCCTTCCAATATTTTGATAAAGACAACAGTGGGTAAGTCATTCTGTCATGATTTAGGATTT CTTCTCAGATTTGTCACTCTATGGCATCTTTTCCCTTAATATACATTCTCAGCCTCAATTTCTTATGACTTTAAACTTGC ATTGTGCCTTCCATTCCCTGTAATCTTTTGGCTTTTGGGTTCAATGTTTAAAGTTAGTTGTCATGTCTATTAACTGAGTT TCATACGAACCTGGACTCCCTGCAATCGGGGAATCCTGCATTCGGTGAAATCAGGGGTCCATAGTTGTCCGACCTTAATC AGACGACTCAGAATTAAAGAGGCTATTGCACACTTAAATAGTCTCTTTATATCTGAATTGTAGGATCGGATAGCTGTAGT CCCCTCTCCCCTGACTTAACTGAATTCAGGATCCTCTGACTTCACTGAATCCGAATTCGTTTCATACACATTTTACAGTT AAATAAACAATGATCAATACCAGAAATCCCATTTCTACCTACATCATTTAGCACATTCATTACAGAATCAAGCGTAATGA CACATGTGCCCTTGTTTTGGTTTGATTCCATCACAGGTTTATTACAAGAGATGAACTGGAAACAGCAATGAAGGAATATG GTATGGGTGATGAAGCCACAATCAGGGAAATTATATCAGAAGTTGATGCAGATAATGTAAGCCTATATTTTCTGTTGACT TAAAAGTTTATAATCTTGTTCCATACTTAACACTCAGTTTTGTGGTTTCTTAGGATGGTAAAATCAACTATGAAGAATTT TGCGCAATGATGAGGAGTGGAACCCAACCGCAAGGCAAGTTATTCTGA
CDS sequence (LotjaGi1g1v0028900.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAGCATTTGAGTGGACAACCCAATATTGTTGAGTTCAAAGGTGCCTATGAGGATAAACAATCTGTTCATGTTGTCAT GGAGCTTTGTGCAGGTGGTGAGCTTTTTGATAGGATCATTGCCAAGGGCCACTACAGTGAAAGAGCTGCAGCTTCAATAT GCAGACAAATTGTTAATGTTGTCCATATCTGCCATTTTATGGGTGTCATGCATAGGGATCTCAAGCCTGAGAATTTCTTG TTAGCTAGTAAGGATGAAAAAGCACTTCTCAAGGCCACAGATTTTGGCTTGTCAGTCTTCATTGAAGAAGGAAAGGTGTA TAAGGATATAGTTGGCAGTGCTTATTATGTTGCTCCTGAGGTTCTGCGGCGTAGATATGGGAAGGAGATAGATATATGGA GTGCAGGAATTATATTATATATCTTACTATGTGGTGTACCTCCATTTTGGGCAGAGACGGAAAAGGGAATATTTGATGCC ATATTGGAAGGTCATATTGATTTTGAAAGTCATCCATGGCCAAGCATATCAAACAGTGCTAAGGATCTTGTTCGTAAGAT GCTTATACAAGACCCCAAGAAACGCATTACTTCTGCTCAGGTTCTAGAACACCCATGGCTTAAAGAAGGTGGAAATGCTT CTGACAAGCCAATAGACAGCGCGGTCCTGTCAAGAATGAAGCAATTCAGAGCAATGAACAAACTGAAAAAACTTGCCCTC AAGGTCATTGCTGAAAATCTTTCTGATGAAGAAATCCATGGTTTGAAGGCAATGTTTACGAACATGGACACAGATAAAAG TGGTTCAATCACCTATGAAGAACTGAGGACAGGATTGCAAAGACTTGGCTCAAAGCTTAGTGAAGCTGAAGTGCGACAGC TTATGGATGCTGCTGATGTAGATGGAAATGGCACAATTGACTACATAGAATTCATCACTGCTACAATGCATAGACATAGG TTAGAAAAAGATGAGCACCTTTACAAGGCCTTCCAATATTTTGATAAAGACAACAGTGGGTTTATTACAAGAGATGAACT GGAAACAGCAATGAAGGAATATGGTATGGGTGATGAAGCCACAATCAGGGAAATTATATCAGAAGTTGATGCAGATAATT TTTGTGGTTTCTTAGGATGGTAA
Protein sequence (LotjaGi1g1v0028900.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICRQIVNVVHICHFMGVMHRDLKPENFL LASKDEKALLKATDFGLSVFIEEGKVYKDIVGSAYYVAPEVLRRRYGKEIDIWSAGIILYILLCGVPPFWAETEKGIFDA ILEGHIDFESHPWPSISNSAKDLVRKMLIQDPKKRITSAQVLEHPWLKEGGNASDKPIDSAVLSRMKQFRAMNKLKKLAL KVIAENLSDEEIHGLKAMFTNMDTDKSGSITYEELRTGLQRLGSKLSEAEVRQLMDAADVDGNGTIDYIEFITATMHRHR LEKDEHLYKAFQYFDKDNSGFITRDELETAMKEYGMGDEATIREIISEVDADNFCGFLGW
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 131 | 131 | - | – | |
| SMART | 1 | 207 | 207 | 3.6E-60 | ||
| ProSiteProfiles | 1 | 207 | 207 | 40.499 | ||
| PANTHER | 1 | 371 | 371 | 1.8E-253 | – | |
| CDD | 1 | 206 | 206 | 9.72467E-112 | – | |
| PANTHER | 1 | 371 | 371 | 1.8E-253 | – | |
| Gene3D | 1 | 32 | 32 | 3.1E-141 | – | |
| Pfam | 2 | 207 | 206 | 1.1E-59 | ||
| SUPERFAMILY | 3 | 228 | 226 | 1.62E-67 | ||
| Gene3D | 33 | 212 | 180 | 3.1E-141 | – | |
| ProSitePatterns | 69 | 81 | 13 | - | ||
| Phobius | 132 | 150 | 19 | - | – | |
| TMHMM | 132 | 151 | 20 | - | – | |
| Phobius | 151 | 380 | 230 | - | – | |
| Gene3D | 213 | 373 | 161 | 3.1E-141 | – | |
| SUPERFAMILY | 246 | 373 | 128 | 1.29E-37 | ||
| ProSiteProfiles | 250 | 285 | 36 | 14.402 | ||
| SMART | 254 | 282 | 29 | 1.4E-4 | ||
| CDD | 255 | 314 | 60 | 7.27045E-16 | ||
| Pfam | 255 | 315 | 61 | 1.2E-11 | ||
| ProSitePatterns | 263 | 275 | 13 | - | ||
| Coils | 272 | 292 | 21 | - | – | |
| ProSiteProfiles | 286 | 321 | 36 | 11.417 | ||
| SMART | 290 | 318 | 29 | 0.036 | ||
| ProSitePatterns | 299 | 311 | 13 | - | ||
| ProSiteProfiles | 322 | 357 | 36 | 15.601 | ||
| SMART | 326 | 354 | 29 | 6.2E-4 | ||
| Pfam | 327 | 353 | 27 | 1.6E-7 | ||
| ProSitePatterns | 335 | 347 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0028900.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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