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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0048600 |
| Transcript ID | LotjaGi1g1v0048600.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Fission 1 protein; TAIR: AT3G57090.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q9M1J1|FIS1A_ARATH Mitochondrial fission 1 protein A; TrEMBL-Plants: tr|I3SYU6|I3SYU6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0048600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:6732294..6735051) extracted from Lotus japonicus Gifu genome v1.2.
CCTAGTACGACTTCCGCTGTATCATTTATTGAACTTAAGGACTAAGGTACCGTGTGTCCGTGTCGGCGTGACATGACAAA ATCCTTAAAACGTGAACTCGAAGTCTGCTCCTTAATTTATCAGAAGAACAAAGAAGGATAGTGAATTCAACTCACCTCAA CTCACCTCAACTCAGTTCAACTCGGTGGTAGTAGCATGGCGAAACTGGAAGCGAAGCTTGGGATGATCGTGGACTCGGTG GGTCAATTCTTCTCCGGCAAAGACCAATTACCTTGGTGCGACTCTGACATCATCGCTGTATGTTCTTTCCCTCTTCAACG ATGATGATGAACTTGTTAATTAGGGTTTACTGTTTTGCTATTTTCATGCTCAGAATCTCAATTTTGCTTCAATTCAGTTT CATATAAGTATCAATTGCTTAACTGTTTCATCCAATTTTGCAATTCTCTTGAGAATTCTGTGGATGCTGCACCTGCACTG GTCACTCTCTTCTAGTTTGGCTGTACCAGCAATTGCAGCCTCAACCCTATAAGCCAGGACCAAGTTTCACTGTGATTTGC TAAAAAAAATTAAACTTGGACCATTTCATGTTGCTTAGAATTGTTGGGCAGGATTGAAATTTGAGACCTGATTTCTTATG GATTTGGAACCTTGTATTGTGATAATATTGGGAGAAGAAAGACAGGACCTAACTTGATTGGTTGTGAAATTCACTGATTT TTTTAATGTATCTTGCTCTGAGCATGTGCTGTATCTTTCTTTTTGGTGTGTTTCTTTGCTGATTTGGTCTATTATATGTA GGGATGTGAAAGAGAGGTTGCTGAGGCTGGGAAGCAATCCTCTGATGAGTTGCTGAAAGAGTGTCTCTTGCGTTTATCAT GGGCTCTTGTTCACTCTAAACGACCTCAAGATGTGCAACGTGGGATTGCCATGCTTGAAGGTAGTTGATAATACAGATCC TCCCTTTCTCTCTCTCTCTCTTTGACTTAATAACATGCAAGTTATATTCTGCGGAGTTATGTTATTGTTATCTATATCTC TGTGCACTTGCAATTAAATTGATGGTAAAATGACAAATTATGGCAGGATCTTTACCTGGTACAGATGACCCGGTTCAGCA AAGGGAGAAGCTATATCTTTTAGCTATTGGTCATTATAGAAGCGGGGATTATTCAAGGAGTAGGGATCTCGTGGAGAGGT GCCTAATGGTATTGTCTTCTCTGTTCTTACTGATACTTGCTTTTCTATGGAAAGATCTGAATAGATCCTTGAAACCCTTT AATTTTTTAACCTCTTGACTTTTACCCCAGCAATTGTATCATACTGATTTTACCTGTTCTTTTTGTTGGAAAAATCACAA TTGTGTGTGTTTTATGCCATTGATCGAGGCTTTATTTCCCTAATCAGTGGCTAAGAAACTGAGGTGTATTACTTTGTAGG TGAAGGAGGTTGTGTTAGCATCAGTCTTAATTATAGCTGTGAATACTTTAACCTACATTTCAGTGCATTACTAGTTGCCA TCTGTATCTTACATTAGTCTTCAAAGCATAATAACAACATTATATCTTGGAGAAGAATCTGACTTCTATAAATGCATTCT CTTTACATTTTACTGTGATTTTTGTCAACAGAAAGGAATAAGATATAGAGCCCGTTTGGATGCCAACCAAATAGCACTAG TTGGAGCTTATTTAGTAGTTTTGCTGGTAGATAAGCTCTAATAAGTCTGTATCCAAACGGGCTCATGGTTTAGTAAACTT TGTTGTCCTGTTGGGGCTTTTGTTATTACCTGGTAACTGTACATAATTTAAAATTACGTAAACCACCTTGAAGGCTTGAA CATTTCAAAATGAATAAGATAGGGTGGCTTATCACAAGAATTATGTGCATCATGTTACTCATTTTCTCCTTTTCATATAC AAGTCTTTGTGCACTGTTTTTTTGAAATTTATAGAGGAAGAATTTACATTACTAAAAAGTTTTGGGTGTTTTGTGATGCC TCTCTCCAATTCCAACAACAACCTGCAAGGCGGAATACGCCATTGAATTTTTTATTTCAACCCTTTTCATCAACACCAAT ACAACATTTATAGTTTGATGTGATATCATTGCATTTACATGTTCTCTTCTGTAGATTGCACCCGACTGGAGGCAGGCAGT GACACTTAAGAAGACAATTGAGGATAAGATCACAAAAGGTTCTCTTCAGTTATTGTTGATTCCCCAAAACATTTTCTACC TCTTATCTTGTTGAAAGCAAAAGGAAAGGGGGGTTTAGCTCTATCTAGCAAAGCACTGACTTTGTTTCTTTTCCTCCATT GTAGATGGTGTCATCGGCCTTGGAATTGCTGCGACTGCTGCAGGACTGATAGCAGGTGGGATTGCGGCTGCCGTGTCTCG AAGAAGGTGACAGAATCCTTTCTGTTAAAAAAAAACCTTTATGATAGCAGCTAATATGTAAGAGGCTCACATATGATACT GGGATTTTGCTGTATCTTACTGCTTGTATTTGAAGGAGGGTGTGAACTGTGAACAGTAATATATAGAAGTTATTTCTATA TTTTTCTTGTATAATCTACTATGTTTTTGTCTGTCAATTTTCCCCCATATTTCATATAAAGCAATATTGAAAACCAATTA CCTACATTGAATTTCTTTGAGATGTGTTATCTAACCTGGCTTACCAATTACCTACATTGATGTAGATTTCACTTATTGAC GTGAGGGTTGAACGATAAATAAAATTAAGACATTGACG
CDS sequence (LotjaGi1g1v0048600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGAAACTGGAAGCGAAGCTTGGGATGATCGTGGACTCGGTGGGTCAATTCTTCTCCGGCAAAGACCAATTACCTTG GTGCGACTCTGACATCATCGCTGGATGTGAAAGAGAGGTTGCTGAGGCTGGGAAGCAATCCTCTGATGAGTTGCTGAAAG AGTGTCTCTTGCGTTTATCATGGGCTCTTGTTCACTCTAAACGACCTCAAGATGTGCAACGTGGGATTGCCATGCTTGAA GGATCTTTACCTGGTACAGATGACCCGGTTCAGCAAAGGGAGAAGCTATATCTTTTAGCTATTGGTCATTATAGAAGCGG GGATTATTCAAGGAGTAGGGATCTCGTGGAGAGGTGCCTAATGATTGCACCCGACTGGAGGCAGGCAGTGACACTTAAGA AGACAATTGAGGATAAGATCACAAAAGATGGTGTCATCGGCCTTGGAATTGCTGCGACTGCTGCAGGACTGATAGCAGGT GGGATTGCGGCTGCCGTGTCTCGAAGAAGGTGA
Protein sequence (LotjaGi1g1v0048600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAKLEAKLGMIVDSVGQFFSGKDQLPWCDSDIIAGCEREVAEAGKQSSDELLKECLLRLSWALVHSKRPQDVQRGIAMLE GSLPGTDDPVQQREKLYLLAIGHYRSGDYSRSRDLVERCLMIAPDWRQAVTLKKTIEDKITKDGVIGLGIAATAAGLIAG GIAAAVSRRR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 143 | 143 | - | – | |
| PANTHER | 4 | 169 | 166 | 7.1E-87 | ||
| PANTHER | 4 | 169 | 166 | 7.1E-87 | – | |
| PIRSF | 7 | 170 | 164 | 2.3E-45 | ||
| SUPERFAMILY | 13 | 169 | 157 | 4.43E-39 | ||
| CDD | 26 | 144 | 119 | 8.40185E-41 | ||
| Gene3D | 29 | 169 | 141 | 3.1E-37 | ||
| Pfam | 58 | 81 | 24 | 4.5E-9 | ||
| Pfam | 93 | 145 | 53 | 3.4E-22 | ||
| Phobius | 144 | 166 | 23 | - | – | |
| TMHMM | 144 | 166 | 23 | - | – | |
| Phobius | 167 | 170 | 4 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Mitochondrial fission | The division of a mitochondrion within a cell to form two or more separate mitochondrial compartments. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0048600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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