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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0051700 |
| Transcript ID | LotjaGi1g1v0051700.1 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Dihydropyrimidinase; TAIR: AT5G12200.1 pyrimidine 2; Swiss-Prot: sp|Q9FMP3|DPYS_ARATH Dihydropyrimidinase; TrEMBL-Plants: tr|G7K315|G7K315_MEDTR Dihydropyrimidinase; Found in the gene: LotjaGi1g1v0051700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:7291815..7299301) extracted from Lotus japonicus Gifu genome v1.2.
TGCTGTAACTTGTTTCCACCTTCATTCTCATCCATGAAAAAGGCCAACGAAGCGGCACGAGCCTCATCAAGCTCCTTTTC TTGCCATGTCTAAAAAAACACTGCCAACATTTCTTTTGGAAGCAACATGCCATTTCCACTCCCTATAAGCAACTGAACCA ACAACTCTACCCCATTTCTCCTTCATGGAATGACATTTGACAAAGTGAAGATGGAGGGAGCCTCTCTCAAGTATGCTTTC CAACACCAAATCTGGCAAGGCCAACACTAACATCTCTTGAGCGTCCTAAACGTTCTCCACCTTTGAAGTGTGAGTCTTCT TTAAAAGAGACATTCATGTAGGAATTAAGTATTTCTTAATTTTAATTTGACATCATCACCATTATCACAATTTTTCGTTT TAACCACCAATATCTTCACTGAGACAGTCTTATCCGACTCTCGTGTGTACTAAATGTAAAATGTCTCTCTAAATATGGGT CTAATAAGAATTAATTTTTTTGACCTTAGGGTCTAAAACAATAATATTTAACCACTGCTACTGACACCCATGGAATCATC AACCTCATCAAACTTTTTAAGGTTGATGAGGTTGATGATTCACCACAGATAGCAACCTGATGCAGCTGAATTGCAGTGAA GCAATGGTGTTCACTTCGTATCTCTTCTTCTCTCTTCTTCTCTTCTGCTTCCTTATCATCACTCCCTCTTCACTCTCACA ACCAAACAACAACCAGGTACCTACATCATCAGAGTTGACTTTCACTTCACCTCAATCGTTGACTTCATTCTAGGTTTTCA ATTTCTCAATTTCCCCATTTTTCTTTCAGTTCTGTGAAGCTGGAATTGGACACACTGAATCTTCATGCGGAACTGGAACC CCATCATCATCCAAGTTGCTGATCAAGGGTGGCACCGTCGTCAATGCTCATCACCAACACGTTGCTGATGTTTACATCGA AGATGGCATCATCGTTGCTGTTAATCCAACCATCAACGTTGGAGATGAAATCAAAGTGATCGATGCCACCGGGAAGTTCA TCATGCCCGGTTAGTTAGCCCAATCTTTTATGGTTATCACAATCATGGTCATCATAATTTGTTTGGCAATTGGCATACTC TGAAAATGCATATTTTTTTCTCTGGGAAATGAGTGTCTGACACCCAGATAGATGATTGATGTGATATATGATATGATGTG ATCGGAAGAAAGGGATAAAGAGAAAAATGGGGTATAAGTGAGGCGGAGCGGAGGTGTTTGTACTATTTGTGTGTTTGAAA ATCGGGATTGTTTTTCTCGACTTACAGTGGGTGTACTGTGTAGACACCCCAAATGTAATTGAGTGAAAGGAAGAGAAGAG AGATAAGTGATACATGTGATCTGACACGAAGAAATAGATAGAATGAAAAATTGGGTTTGTATAAGGTGTCTATGTTGTCT AGGTTCTTAAAAATCAGGATTGTTTTTCTTGACTTACAGGGGGCATTGATCCTCATACCCACCTGGAGTTTGAGTTTATG AATACTGTGACAGTAGATGACTTCTTCAGTGGTCAAGCTGCAGCATTAGCTGGCGGGACAACTATGCACATTGACTTCGT TATACCGCTTAATGGGAGTTTAACGGCTGGGTTTGAAGCGTATGAAAAGAAGGCGAAGAAGGCTTGCATGGATTATGGGT TCCATATGGCTGTCACCAAGTGGGATGAAACTGTTTCGAGAGAAATGGAAATCATGGTCAAGGAGAAAGGTTGTAATCTA TTCCCTTGTTGCGTTTTGAATTGGGAAATGGGTTGATTATGCAGCAATAACCATTTGTGTTTTGTAATTGCAGGTATCAA CTCCTTTAAGTTTTTCATGGCATACAAAGGAGCTCTCATGATCAATGATGAGCTTCTTCTGGAAGCATTTAAAAAATGCA AGTCCCTTGGCGCCTTAGCCATGGTCCATGCAGAAAATGGAGATGCTGTGTATGAAGGTCAAAATAGAATGATTGAGCTT GGAATAACAGGTCCTGAGGGGCATGCTCTTTCAAGGCCTGCAGTGGTAAATTCTCAAATTTGTTCTTCCATAAAGAATTC ACTGAATAATGGAATTGAAATATTGATCATGGCTGCTTTCATTCCATCTTCTCCATTGTCATAAGAAGCCATAGCATACA CAATTTTCACTTGTTACTCAAGTCAAATAAAACTGCTTTTAGCTGCTAGTGTCAAATTTCACACACTTGTAACCAGACTT GGTTGACATTTGTCGTGTTCAGTTTACATCTGTTTTGATAAACCACATTTGGTTAATATGTGATGGTTTGATTACTGTGA GGTCTAAATTTCTGTCTGTGTGATTTATAGAACATTTACCTATTGGACTTGGGTTCCTGTGTAGTTGGAAGGAGAGGCAA CTGCCCGTGCTATTCGCTTAGCAGATTTTGTAAACACTCCTTTGTATGTGGTTCATGTAATGAGCATTGATGCAATGGAA GAAATTGCAAAGGCCCGCAAATCAGGTTCTTAACTTGAATTCTTGTAGTGTTATTCTTTATTTTCATTAATGTTAGCGGG GAGGTGACTCTTGCAAATGATATAAGTGGACAACTCTTTAGTATATGTGTATAAATGTAGTATAAAACCATTCACATGTT TTCACCCAACTCAACAGCTTAAACTTTTGAGACAGTTGGTTTATATGGTATAAATGCATGACTCTGAAGTACAATCATTG TTGCCCCTCATTAGTCTTATGAAAAGTTGAAATTTAGTACAAGGTAGGTGGATTTGTGCTTTGTCCACGCTTCAAGCCCA ATGAGATCTTGCGTGAGGGGGCATGTTACAAATATAATATAAATCATTCATGTGTAATGTGTCTTCTTCACCAAAAAGCT TAAGTTGTTATAATAGTTGGTTTATGACACTTTAATTATATTTTACAGACTTGTATGATAGTCATACTTGTCTTATTCTA TGACCAATGCCCTGTTTTACTTTTTTTTTTTCACGTGTCCATGATGAATTAAAGTATCTTTGTTGGTGGAAAATTAATTC CTTCTTGCCATAAAGATGGATTAAATTTATAAATCATGCTTCATCCTCACTTTCAAGCTCATAAATTTGTTCATATTCAT TCTATGAACTAAACACAGTACAAGTGAATTGGATTGATGTCCTTATTGTTTACATATAATTGATGTGTTTCAAGTGTGAC ATTTTAAGTTTTATTGATAGCTTAGTTTTTACGAGCTTCCCTGCTTTTGAAACTTCAAAACAGAGGATTAGTTTATATGT TTCCTCTGACATTTTAATTGTTTTTGTTCCCTAATAATTTTGTTTTAGTAAGGTCACCTGTTTGCTTTCATACTGCAGGA CAACGGGTAATTGGAGAGCCTGTTGCCTCTGGGTTAGCCCTTGATGAATCTTGGCTTTGGCATCCTGACTTTGAGACTGC AGCAAGGCAAGGGCCTTCACTTGTTTCATTGTTTTCTGTCGTTGTTGGTGTTGTGTTGTTTTTTGTCTGTTGTATTCAGT TTTAAGAATATAAACCATATTCCATCTTATGTTTCAGGTATGTCATGAGTCCCCCTATTAGAAAACGAGGACATGATAAG GCCCTTCAAGCAGCCCTATCAACAGGAGTTTTGCAGGTTTCACATTATGAGTTAGTCTTAAGTTCACTAATCATTTAAAG ATAAGGGCTCGAGTTTGTGGAAGTAGTTAGGCCTTTGCCCTGGCATGCATCCTAACACTTGTTTCTATTTATAATCTCTA TATTATTGTTAATACCTCACATTGACTAGAGACATGTCCAACATAGTTCTTATAAAAGGCTTTGACAATTCTCACCTTAC AAGCTAGCTTTTGGGATTTAGACTTGGCCTGATTCTAAGATGATATCCGAGCATGTCCTAGATCTGATATTGGATTCTAA ATTCGGCCACCCTGGGATGCCTTTGTTGCATGCAGCTGTTAGTTCTATAAACTTCACGCTCCAGATGTTCAATTTTGTGC ACGAGGGGTGTATTAAAATCCCACGTTGACTAGAGATATGACCAAAGTAATCTTTAACTCCTTATTAAAGGCTTTGGCAA AATCCTTACCTTACAAGCTAGCTTTTGGGGTTGAGTTAGGTTGAGCCCAAGTTCTAAGAATTACCATTGCCTTGAGCCCA ATTTTATTCTCTTTACTAGGATCGTTTATTTGACTAAAGGGTACCTTTTACAAATTTGCAGCTGGTAGGAACTGATCATT GTGCCTTTAATTCCACCCAGAAAGCTTTTGGAATTGATGACTTCCGGAAAATTCCTAATGGTGTCAATGGTAATCACATA ATGATCCTGGATATTTGTGGCCTAAATACATTGTGGTTGGTTTTAAAATGTTTCCTTACTAATATGCAATGCAATCCAAA ATCTGTAGGCATTGAAGAAAGGATGCATATAGTATGGGATATCATGGTGGTAAGATAATAAATTTCCAGCTTCTCCTTTG CTCTCTTGATAGATTGGGGTGAAATGGAGGAGAGGAAGATGATAACCTTCTAACTAGAGTTTATGGTTATACATCTCAGG ATTCTGGCCAGATATCTGTCACTGACTATGTCCGGGTGACCAGCACCGAATGGTATATTTTCTGTTAATCAAAGTAAAAT TGCCATCCAGTTCTTATGATAATAAAAAGGAGTTCATAGTATTATTTATTATTATTATTTGAAAAGTCTATTTGACAAAG ATGCCAAAAATTGTGAATGACTTTTTTTTGCTTTTGTTTATGCATTCATTTCAGTGCTAAAGTCTTCAATATATATCCAA AGAAAGGAGCTATTCTTCCAGGATCTGATGCAGACATTATCATCCTCAATCCAAATTCAAGCTTTGAGATAACTGTGAAG TCACACCACTCCAGGCTGGACACAAACGTCTATGAGGGAAGAAGGGGAAAGGTACTGATTTAGCTATAATATGGTCCATT TAGGGATGGAAGTTAATTAACTGCTTAGTGACAAAATGAGCAGTGAGCACGAAACAGATCTCCATGTCTTGACCTACTAT GGGGTTTTCACCCATTTCTCTTAAGTTCTCTCTGGGCTTCTGGTATGATGACTTGACTTAAGGAAATTTTTTTTTTAAAT TAATCTTGTGCTATTTCAGGTAGTCAGGTACAAATGGTATATTACTTTATTGTAAAGTAAGAATTTGTATACAGTCCTAT TCAATTAAAGGCATGTTGTTGATCTGGCTGTGTTGAGTTCTGAATTAGGTAGTGCACACTGGTTTTGCATATCGTAAAAC ACAATTGTTAATGGCTTAACATTTGACTGCTAAAATTAATTCCAGATTTAAGCAGATTCTTTGTTAATAATTTTATATTG CGGACATTTTCTATTGGCTATCATTGGGAAATAACAAGTTATTCTTAACAAGTCACACTGCATCTTGAATTGCACTTGGG CACTGCACTGCAAATAGCATTGACTGGGCTAATCTAGGCTTTGTTTGCTAAAGCATATCACTAAGTGTGTGTGTGTGTGT CTGGGCAGAGTCTCTCACGGCCCATTGACTGATTTGTTCATGCTTTGTTCTTTTACCTTTTTTTGTGTCTTATGGCTCCA TTCAACACATGCTTGTTGTATTTTGTTCAATAATTGAAGCCTTGTCGTGTGATATCACGATTCAAACTATAATTATCTTA TTTCAGGGCAAAGTTGAAGTGACTATAGCAGGAGGAAGAATTGTTTGGGAAAACAATGAACTGAAGGTTGCTCCTGGTAC TGGAAAATACATAAAAACGCCTCCTTTTAATTATCTATTTGATGGACTGGACAAGAAAGATGCCAGTTATCTGAATTCCC TTCAAGCCCCAGTAAAGCGAGCCAAATCCACCATTTAAAAGTTTCCTGTATCTTTTATTAGGAAAATTTCAACATATTAC TAAGAAAAAAAAAACAATAAAGACCAGTTGTCTATTTAAATAAAAAAAATGTATATTCATATGCTGGTAAGCATTGTATG TATATATTATAATAGATATATTTCATGTTTCCTTTTCCACTGATGTAAAGTACATTGCTAGACTGTGTACTGTCTACAAC AATTGGAGAAAAAGAGACCATGGCTATAATAAGATGCTGTACAATACAATAATGCATTCAGATTATGAAAGCTGCTGGTC AGGTTCCTGTTGAATGTATCATCTACATAATATTCTACAAGTAGCATGTCCATGACTTGAAAATGGAATGTCTATGGCAG TATGGTTCTAATCTTTTCAAGGCCTAATGCAACAATTTATGTAGGTAAGGATCCTCTTTTTCCCCTGCATAATAATAGTC AACAAATGAGTTAGTAATTGTATTCACTGAATCCACAATCCACAGTATTGCCATTTTTCTTTCATGCCCCTCTCTTTGTG TGAATGTGGATGTTTCAAGTTAATAGAAACACCAAATGGGTGTAGCTCAGGTATACAAGCATAAACTAAAAAACAGCACT TGTACATAGGAATAAGAACTAAGAACTATGGTCTCACCATGACTATAGGTTCTTCATGAGCATGTCCATGTCCATGTCCG TGGCCATGATAAGCATGACCATGACCATGATGAGCATGTCCAAGACCTTGATGAGCATGATGATGACCACGATTGGCATT GATGAACTCCCGTTCATTCCCAAGGCTGTGGCGCTTGATATCAGTGAGATCAATCTTCTGTTGCTTTTTCTTTGCTCGAG CCTGTGTGAACACCATTGAATAGTCTGTAGCTCCTGGAGCACTTTGGTCCCACCCTCCAAACTGAGGCACAGTTGTTACA CCATGCTTTTTCTGCATATAATAGGATAATAATGTTAGTTGGCACTTGATAGCATATCTTATTTCATGGTGAAATATTTT AAAATCAATTCTCATTATAAGCTAGCTACACGTCTCAACTTTTGAGTAAACGTATTTTGGATGTTGTACAAATTGTAATA CTAAACATGCATTCATTATTTTTACATAGAAAAGACAGTTTGTTTGGTGGAAGAATTGGAAATTTCTTCCTGAACTTGTG TTGGTTAACACCTCCAATGATCTATGCACATTAACCATTTCATGATTTCAAAAGCTTCCAATTTTTCTTGTGTGCAAAGG GAGTGAGTCTGGAATTTGTTTCATAAGGATAAGTTTAAGAAATTCAAAATGTATTTTATACAGCAATCATGCAGAATCCA GTAAATTAGAAACACCCCAATGTACCAAAATTGAACAATTACTAGAAAACTCTGAAATGTCTACATAAACAAGAAATAAA AAAGGAGCTTTGTAACAAATAGAACTACAACTTATAACCATATAGCATAAAAAATGTCCTTTTCCTTATTCTTCTTTCCT GAATCCTACCATGGTTTAAGACTATTATTATCATGAAGCAACTATTCCAAAAGCTTAAGCTGTTAGATGAATACAAAAGA AATATTTTATATTATATTTCTAATTATTGCAAAAGACATAGTTTTTC
CDS sequence (LotjaGi1g1v0051700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAGCTGAATTGCAGTGAAGCAATGGTGTTCACTTCGTATCTCTTCTTCTCTCTTCTTCTCTTCTGCTTCCTTATCAT CACTCCCTCTTCACTCTCACAACCAAACAACAACCAGTTCTGTGAAGCTGGAATTGGACACACTGAATCTTCATGCGGAA CTGGAACCCCATCATCATCCAAGTTGCTGATCAAGGGTGGCACCGTCGTCAATGCTCATCACCAACACGTTGCTGATGTT TACATCGAAGATGGCATCATCGTTGCTGTTAATCCAACCATCAACGTTGGAGATGAAATCAAAGTGATCGATGCCACCGG GAAGTTCATCATGCCCGGGGGCATTGATCCTCATACCCACCTGGAGTTTGAGTTTATGAATACTGTGACAGTAGATGACT TCTTCAGTGGTCAAGCTGCAGCATTAGCTGGCGGGACAACTATGCACATTGACTTCGTTATACCGCTTAATGGGAGTTTA ACGGCTGGGTTTGAAGCGTATGAAAAGAAGGCGAAGAAGGCTTGCATGGATTATGGGTTCCATATGGCTGTCACCAAGTG GGATGAAACTGTTTCGAGAGAAATGGAAATCATGGTCAAGGAGAAAGGTATCAACTCCTTTAAGTTTTTCATGGCATACA AAGGAGCTCTCATGATCAATGATGAGCTTCTTCTGGAAGCATTTAAAAAATGCAAGTCCCTTGGCGCCTTAGCCATGGTC CATGCAGAAAATGGAGATGCTGTGTATGAAGGTCAAAATAGAATGATTGAGCTTGGAATAACAGGTCCTGAGGGGCATGC TCTTTCAAGGCCTGCAGTGTTGGAAGGAGAGGCAACTGCCCGTGCTATTCGCTTAGCAGATTTTGTAAACACTCCTTTGT ATGTGGTTCATGTAATGAGCATTGATGCAATGGAAGAAATTGCAAAGGCCCGCAAATCAGGACAACGGGTAATTGGAGAG CCTGTTGCCTCTGGGTTAGCCCTTGATGAATCTTGGCTTTGGCATCCTGACTTTGAGACTGCAGCAAGGTATGTCATGAG TCCCCCTATTAGAAAACGAGGACATGATAAGGCCCTTCAAGCAGCCCTATCAACAGGAGTTTTGCAGCTGGTAGGAACTG ATCATTGTGCCTTTAATTCCACCCAGAAAGCTTTTGGAATTGATGACTTCCGGAAAATTCCTAATGGTGTCAATGGCATT GAAGAAAGGATGCATATAGTATGGGATATCATGGTGGATTCTGGCCAGATATCTGTCACTGACTATGTCCGGGTGACCAG CACCGAATGTGCTAAAGTCTTCAATATATATCCAAAGAAAGGAGCTATTCTTCCAGGATCTGATGCAGACATTATCATCC TCAATCCAAATTCAAGCTTTGAGATAACTGTGAAGTCACACCACTCCAGGCTGGACACAAACGTCTATGAGGGAAGAAGG GGAAAGGGCAAAGTTGAAGTGACTATAGCAGGAGGAAGAATTGTTTGGGAAAACAATGAACTGAAGGTTGCTCCTGGTAC TGGAAAATACATAAAAACGCCTCCTTTTAATTATCTATTTGATGGACTGGACAAGAAAGATGCCAGTTATCTGAATTCCC TTCAAGCCCCAGTAAAGCGAGCCAAATCCACCATTTAA
Protein sequence (LotjaGi1g1v0051700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQLNCSEAMVFTSYLFFSLLLFCFLIITPSSLSQPNNNQFCEAGIGHTESSCGTGTPSSSKLLIKGGTVVNAHHQHVADV YIEDGIIVAVNPTINVGDEIKVIDATGKFIMPGGIDPHTHLEFEFMNTVTVDDFFSGQAAALAGGTTMHIDFVIPLNGSL TAGFEAYEKKAKKACMDYGFHMAVTKWDETVSREMEIMVKEKGINSFKFFMAYKGALMINDELLLEAFKKCKSLGALAMV HAENGDAVYEGQNRMIELGITGPEGHALSRPAVLEGEATARAIRLADFVNTPLYVVHVMSIDAMEEIAKARKSGQRVIGE PVASGLALDESWLWHPDFETAARYVMSPPIRKRGHDKALQAALSTGVLQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGI EERMHIVWDIMVDSGQISVTDYVRVTSTECAKVFNIYPKKGAILPGSDADIIILNPNSSFEITVKSHHSRLDTNVYEGRR GKGKVEVTIAGGRIVWENNELKVAPGTGKYIKTPPFNYLFDGLDKKDASYLNSLQAPVKRAKSTI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 40 | 40 | - | – | |
| Phobius | 1 | 14 | 14 | - | – | |
| SignalP_EUK | 1 | 33 | 33 | - | – | |
| Phobius | 1 | 33 | 33 | - | – | |
| TMHMM | 7 | 29 | 23 | - | – | |
| Phobius | 15 | 26 | 12 | - | – | |
| Phobius | 27 | 33 | 7 | - | – | |
| Phobius | 34 | 545 | 512 | - | – | |
| PANTHER | 58 | 531 | 474 | 1.7E-249 | – | |
| PANTHER | 58 | 531 | 474 | 1.7E-249 | – | |
| SUPERFAMILY | 61 | 512 | 452 | 1.44E-33 | ||
| Gene3D | 62 | 521 | 460 | 1.4E-189 | ||
| TIGRFAM | 62 | 512 | 451 | 9.8E-194 | ||
| CDD | 62 | 508 | 447 | 0.0 | ||
| Pfam | 109 | 495 | 387 | 2.7E-27 | ||
| Gene3D | 113 | 482 | 370 | 1.4E-189 | – | |
| SUPERFAMILY | 113 | 441 | 329 | 4.48E-96 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Cytoplasm | All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. | ||
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. | ||
| Molecular function | Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | Catalysis of the hydrolysis of any carbon-nitrogen bond, C-N, with the exception of peptide bonds. |
Expression pattern of LotjaGi1g1v0051700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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