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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0054500 |
| Transcript ID | LotjaGi1g1v0054500.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kinase family protein; TAIR: AT5G10270.1 cyclin-dependent kinase C;1; Swiss-Prot: sp|Q9LFT8|CDKC1_ARATH Cyclin-dependent kinase C-1; TrEMBL-Plants: tr|I1JIS7|I1JIS7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0054500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:7665208..7670525) extracted from Lotus japonicus Gifu genome v1.2.
CTAAATGAAATAACTTTCCCATCTTACCTAACTCTAGCACAAACATATCTAATGACATTACTTATACTTATTTGAATTAA AAAAATATGATCCATAAACCAAAGTCATCAAAAAAATTCTAGGATCTATTTAGATTTGACCATATATGTGAAGATCTGGA ACATATTTAACCATTATTATTTTTACATACATTTTTATTTTTATATTTTATCTATTGTTCTGGAGAATGCTGCGGTAAAG TTCACGCGCGCGAAAACCCTGAACCGCAATCCTCAATCAATCATCCGAAGATCTGGTCTGAATTTGAGTCTGAGTGTTTG GAAGATTCATCAAGCAGCCATGGCTGGTCAGCTCAACGTGATTGAATCCGCCACTTGGGGATCCAGAAGTGTCGATTGCT TCGAGAAATTGGAGCAAATTGGTGAAGGCACATATGGGTTTGTCTCAATTTCTCTTCTTCTTTACCTTTCTCCTATCAAA ATTTAATCTTTTTTAATGGGGTGGTTCTTTTTTCGCATCATGGAAGATGAAATTTTTTCAAGTCAATGGTAGTTATGCTT GTTTTTGTTGGGCTAGGTTAAAGTTCAATTTTTTTTTTTTTCATTTGGATATTTGTTCCCAATTTTATGACCCTTTTTTT TGGTTTAAACATCCGGTACTCGTTCACCCTTTGGATGCCGTTAGATTTGGGATTTAATCACAGTTAAGGCTTTGCATCCC TCCCCCAAAGTGTATTGTGTGGGGATCGAACCTGAGAGTTCTTCCCAGACACTCGGTCTGCGTTGCCAACTGAGCTAAAA CTAATACATTTTATGTTTCTTGAACTCTTTTTCCCATTTAAAGAAAAAAATAGTATTTTTTGCACTTATTGGTGATGTTG TCTGAAGTGGACTGATCTATAACTTCATGTGTTTATGTTTGCAGTCAGGTCTTCATGGCGAAGGAGATCGAAACCGGTGA AATCGTTGCTCTGAAGAGGATACGGATGGACAATGAGAGAGAAGGGGTATGTTAATTCTTTGAGTCTTGAATGTTTAATT TTTTTACTTAGATTATGGGTGCATAACATATTTTCATTGTACATGTTATTCAGTTGGCCTAAATCAGAATTTGCAGTCAA AGTCTGTTAGTTCTGTATTGTGAATTTCTCCTAGGAACTGTATTGTAAATTTTTTCATTGCAGTTTCCTATAACTGCTAT ACGAGAAATCAAAATTTTAAAGAAACTGCACCATGAGAATGTGATCGAGCTGAAAGAAATTGTGACTTCGCCAGGTATAC TTTAAAGATATAGATGTGCTTTGTTTTCAAAATGGTTTAGGATTTATAAATAACATTGTGTTTCTTCTTTCAGGCCCTGA GAGAGATGGACAAGGAAGGCCAGGCAAGTCATCCGTTCTCACATTATTAGCTAATTACTGAATAATAGTACTCATCTATT TTCATATTATTAGCCAATTACTGAATAATAGTACATAACATGCTTTATAGCTCTAGCTGTGTGAATATATCCATCAACTC CCATTGGATTCTCTTTGTTCCATACTAACCTTTTTCACTTGTTTCTCATTGTTGTTTTTGGGATTGCAGATGGTAACAAA TATAAAGGTGGTATTTACATGGTCTTTGAATACATGGACCATGATTTAACAGGTCTTGCTGACCGACCTGAAATGAGATT TACAGTTCCTCAAATTAAGGTACGAGTGTTTATACTAATAATTGATTTTTCATATATTAATATTTGTTTATTTTGATGTT GTCTGAGTTGCGTTTCCTTTCTTAAGTGTTATATGAGACAGCTTTTGACGGGGCTTCACTACTGTCATGTAAATCAAGTA CTTCATCGTGATATCAAAGGTCTGTGTATTAACAGGGTTATGGTTTTAGATCAGAATGTTGGAAATATTACTACTTTTTG ATGTATTTTATTCTGCTGCAGGATCAAATCTTCTTATAGACAATGAAGGAAATTTGAAGCTTGCAGATTTTGGACTGGCA CGATCATTTTCTAGTGAGCAAAATGCAAATCTTACAAATCGTGTCATTACGTTATGGTACAGGTAATTGGTGTCAAATTT TTCTTGAGGAGATTGAATAGGGCAGAGGGAGGGGCTATTTGATTGGCAAGTGCATGTATTGAGTTTGTTTTATTTATGTA GACCGCCTGAGTTGCTTCTGGGGACAACGAAGTATGGACCAGCTGTAGATATGTGGTCTGTTGGGTGCATTTTTGCTGAG CTTCTTCATGGGAAGCCCATTTTTCCTGGGAAAGATGAGGTTAGTGATATTTTATATATGATAGTTAAGAGAAATGGGTG CCGAAGTGGTGAGTGATTGATGTGGTGTAGTATTTAGGGTAGATTTGATTTTATCCTGTATATTGCCAGTAGGAAAAAAA AGATTCTTTATATTACATTCTGATTCTCCGGATTCAGTCTCTAAATACATCCTGCCATATTCCTTTCTCTGCATATTATA AGCATATCTCAGTGCAACTCAATTGTTATGATCATTGATGTCTATGTATTTCGAATCTATGGATTCTACTGAAACATAGT ACGCTAATAACAATGTTTGGCTAGACTGTTGCATCTAATTTGCTCAATACTTTTCAGAAATCTCATTATTACATCTTTGT CATATCTTGCTTGTATTATATATGGCCTATGCTTTATATCCTAATGGTAATATTTTTTGGTACAGCTTAAATGTAATACA TCTTTTGTTTGTAATTATTGTAGCCAGAACAATTAAACAAAATATTTGAGCTGTGTGGAGCACCAGATGAGGTCAATTGG CCTGGGGTTTCTAAGACACCTTGGTATAATCAATTTAAGCCATCAAGGCCAATGAAAAGACGTTTGAGGGATGTTTTCAG GCAGTAAGTATCAAGGCTTGAGCATCATCACTAAGCATATATGTACTTTTATCCACCTAGGAAATAAGGATACAGTCCAT ATTCTGTGCTTGTAAATTTATCTAAATAGCTTGTTTCCCTGTGACTTTATAGTTTTGATCGTCATGCTCTAGAATTGTTG GACAAGATGCTGACACTTGATCCGGCTCAGGTATCATTTCTTCACTTGTGGGTCTGATTTATTAATTGTTAAATGATTTT GAATTGCTATTTTAAGTGCTTCAATTCCCTGTTATTCCTGTTTTATTTTATATCACTCGACCTGTTTTATATGACGAGGT TAGCCATAGCTACTATTGTTATTTTGTTATTATTATGTATCTCATATACTGACAGATCTCATACTATGCGTAAGATAAAA ATGGTGTACATCTGGTTTCCTTTGTGAGAAACTTTCGTAATGTAATAAAAAAAATTGAGACAAGAAAAAAAAAAGAATTG ATGGCATAATGCTAGTTTAGACGACTTTGAGAAGTTTTTTTTTTTTTTGCTATGAATATGTCATTTGTAACATAGTTGGG TTTGTGTTATGATTTGCTTATTCACCTCTAGGCTATATGCTTTATGAAAATTAATTTTGTTCATGATTTGTTTCTTAATA TTTGTTTGTAAATTTGATTTTTGTAGAGAATTACGGCGAAAGATGCACTTGATGCTGAGTATTTCTGGACAGATCCATTA CCATGCGATCCCAAGAGGTAAGACCTAGTTTCTATTTTCAAAATATTAATTTTCCTTGAAATTGTTAGATCGTGATAGGA ATAAATACTTGTTCCATTCACTCCTTCGGCTCCTTCCCTTTTAACTTTATTTTGTTTTATGCAACTAATCATTTACTGGT CAACATTCTTCAACTTGCTACTTCTCTTTTGTGTGGCTTAGTTTACCCAAGTATGAGTCATCACATGAATTTCAAACAAA GAAAAAGCGCCAGCAACAAAGGCAAAATGAAGAAATTGCAAAGCGTCAGAAAATGCAACAACCACAGCCGCACACTCGTC TTCCCCCAATTCAGCAGCCTGGGCAACATGCCCAAATGCGGTCAGGATCTAAGCAGCCAATTCATGGCTCTCAACCTCAA GTTGTTGCAGGACCTTCTCATCATTATGGGAGGGCTCGAGGTCCACCTGGTGGGCCAGGAAGATATCCTCCCAGTGGAAA CCCCAGCGGAGGATACAATCACCCAAATCGTGGAGGTCAAGGAGGAGGTGGTTACGGCAGCGGGCCTTATCCTCCTCAAG GGCGAGGGGCACCTTATGGGTCCAGTGGTATGCCTGGTGGTGGTCCTCGTGGTGGAGGTGGCGGTTATGGGGCTGGAGCT CCAAACTATCCTCAACAAGGCGGTCCATATGGGGGCTCAGCAGCTGGTCGTGGCTCAAACATGATGGGTGGAAATCGCAA TCAACAGTATGGTTGGCAGCAATAAATTAATTTTCTTGTAATGTGGTGATGCTCTGATAAATTTGAGAAATATCAGACAA ATCAATGGGTCAAGTGCCCGAGAAAATATGAGATATAGTCTCAATGGATAGTAGAATATTGAGATACAATATTCCCATCA CTTGAAGTTCCTGGAAGCCTTTGTGATGCATGCACCTTAGGTAATGTTTGATTCCCCTGGTCATAAGGGGACCACAAAAA TGAAATAAACCTCTGATTTTGTAGTTTCATAATATGCATGATATTCCTGTCCAGGATATATGAATAATAGCAGCATGCAT CTAAATATATAAGTCTTCTTTTCTTACTGATATTTTTTTCCAGGATTGAACCTTGTGCAATATTTATTTTCCTTGCTTTT ACAATATAATACAATTTGCTTCATAAATTGTTCCCTGTAAGCATTGCAATGCTTTCCCATAAGAACCCCAAAAAGATAGT ATAGTCCCGTGCTTCAATGAAAATTATTCACTTAGCCACACTATGAAAGAAGAAAGCACTTGTTGGGATGTAGAAGCATT AGATTCCATATAGAGAAAAGCAGCTCAGATTTTGTTACTATTGCCAACTAACTTTTGGGAATGACTAGAATAATGCTTGG TTGCATGATTCCCATTTCCACATTTTAGGTTCCTTGGGATTGAACTTGAGGAATGTAGTGCTTCCAATGCAGCTAGAACA TCAACCATGTGTGGTCTAAATTTGGGATCCATATTCAGGCATTGGAGAGCAAGTGCAGCTGCAGCTTGTGCTCCTTTCTT GGAGTATTGACCACCCAATCTGGTATCCATGACTCTAGAAATTCTTCTGTTGTCACTCAGGAAGGGCTTTGCCCAATCCA CCAGTGTTTCTTCTGAAAATGCAGCCTTCTCATCTTCAACTACACGCCTTCCTGTTAGCAACTCTAACAAGACAACACCA AAGCTGTATACATCACTCCTTGGGTTCAAATGACCTGT
CDS sequence (LotjaGi1g1v0054500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGGTCAGCTCAACGTGATTGAATCCGCCACTTGGGGATCCAGAAGTGTCGATTGCTTCGAGAAATTGGAGCAAAT TGGTGAAGGCACATATGGTCAGGTCTTCATGGCGAAGGAGATCGAAACCGGTGAAATCGTTGCTCTGAAGAGGATACGGA TGGACAATGAGAGAGAAGGGTTTCCTATAACTGCTATACGAGAAATCAAAATTTTAAAGAAACTGCACCATGAGAATGTG ATCGAGCTGAAAGAAATTGTGACTTCGCCAGGCCCTGAGAGAGATGGACAAGGAAGGCCAGATGGTAACAAATATAAAGG TGGTATTTACATGGTCTTTGAATACATGGACCATGATTTAACAGGTCTTGCTGACCGACCTGAAATGAGATTTACAGTTC CTCAAATTAAGTGTTATATGAGACAGCTTTTGACGGGGCTTCACTACTGTCATGTAAATCAAGTACTTCATCGTGATATC AAAGGATCAAATCTTCTTATAGACAATGAAGGAAATTTGAAGCTTGCAGATTTTGGACTGGCACGATCATTTTCTAGTGA GCAAAATGCAAATCTTACAAATCGTGTCATTACGTTATGGTACAGACCGCCTGAGTTGCTTCTGGGGACAACGAAGTATG GACCAGCTGTAGATATGTGGTCTGTTGGGTGCATTTTTGCTGAGCTTCTTCATGGGAAGCCCATTTTTCCTGGGAAAGAT GAGCCAGAACAATTAAACAAAATATTTGAGCTGTGTGGAGCACCAGATGAGGTCAATTGGCCTGGGGTTTCTAAGACACC TTGGTATAATCAATTTAAGCCATCAAGGCCAATGAAAAGACGTTTGAGGGATGTTTTCAGGCATTTTGATCGTCATGCTC TAGAATTGTTGGACAAGATGCTGACACTTGATCCGGCTCAGAGAATTACGGCGAAAGATGCACTTGATGCTGAGTATTTC TGGACAGATCCATTACCATGCGATCCCAAGAGTTTACCCAAGTATGAGTCATCACATGAATTTCAAACAAAGAAAAAGCG CCAGCAACAAAGGCAAAATGAAGAAATTGCAAAGCGTCAGAAAATGCAACAACCACAGCCGCACACTCGTCTTCCCCCAA TTCAGCAGCCTGGGCAACATGCCCAAATGCGGTCAGGATCTAAGCAGCCAATTCATGGCTCTCAACCTCAAGTTGTTGCA GGACCTTCTCATCATTATGGGAGGGCTCGAGGTCCACCTGGTGGGCCAGGAAGATATCCTCCCAGTGGAAACCCCAGCGG AGGATACAATCACCCAAATCGTGGAGGTCAAGGAGGAGGTGGTTACGGCAGCGGGCCTTATCCTCCTCAAGGGCGAGGGG CACCTTATGGGTCCAGTGGTATGCCTGGTGGTGGTCCTCGTGGTGGAGGTGGCGGTTATGGGGCTGGAGCTCCAAACTAT CCTCAACAAGGCGGTCCATATGGGGGCTCAGCAGCTGGTCGTGGCTCAAACATGATGGGTGGAAATCGCAATCAACAGTA TGGTTGGCAGCAATAA
Protein sequence (LotjaGi1g1v0054500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAGQLNVIESATWGSRSVDCFEKLEQIGEGTYGQVFMAKEIETGEIVALKRIRMDNEREGFPITAIREIKILKKLHHENV IELKEIVTSPGPERDGQGRPDGNKYKGGIYMVFEYMDHDLTGLADRPEMRFTVPQIKCYMRQLLTGLHYCHVNQVLHRDI KGSNLLIDNEGNLKLADFGLARSFSSEQNANLTNRVITLWYRPPELLLGTTKYGPAVDMWSVGCIFAELLHGKPIFPGKD EPEQLNKIFELCGAPDEVNWPGVSKTPWYNQFKPSRPMKRRLRDVFRHFDRHALELLDKMLTLDPAQRITAKDALDAEYF WTDPLPCDPKSLPKYESSHEFQTKKKRQQQRQNEEIAKRQKMQQPQPHTRLPPIQQPGQHAQMRSGSKQPIHGSQPQVVA GPSHHYGRARGPPGGPGRYPPSGNPSGGYNHPNRGGQGGGGYGSGPYPPQGRGAPYGSSGMPGGGPRGGGGGYGAGAPNY PQQGGPYGGSAAGRGSNMMGGNRNQQYGWQQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 504 | 503 | 2.0E-282 | – | |
| PANTHER | 2 | 504 | 503 | 2.0E-282 | – | |
| Gene3D | 8 | 117 | 110 | 8.8E-40 | – | |
| SUPERFAMILY | 14 | 328 | 315 | 2.1E-98 | ||
| CDD | 21 | 320 | 300 | 0.0 | – | |
| SMART | 21 | 320 | 300 | 7.5E-96 | ||
| ProSiteProfiles | 21 | 320 | 300 | 45.842 | ||
| Pfam | 21 | 320 | 300 | 6.5E-74 | ||
| ProSitePatterns | 27 | 50 | 24 | - | ||
| Gene3D | 118 | 360 | 243 | 4.7E-78 | – | |
| ProSitePatterns | 155 | 167 | 13 | - | ||
| MobiDBLite | 331 | 511 | 181 | - | – | |
| MobiDBLite | 333 | 358 | 26 | - | – | |
| MobiDBLite | 359 | 396 | 38 | - | – | |
| MobiDBLite | 497 | 511 | 15 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0054500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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