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LotjaGi1g1v0054500.2

Overview

Field Value
Gene ID LotjaGi1g1v0054500
Transcript ID LotjaGi1g1v0054500.2
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description Kinase family protein; TAIR: AT5G10270.1 cyclin-dependent kinase C;1; Swiss-Prot: sp|Q9LFT8|CDKC1_ARATH Cyclin-dependent kinase C-1; TrEMBL-Plants: tr|I1JIS7|I1JIS7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0054500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:7665535..7669552) extracted from Lotus japonicus Gifu genome v1.2.

CATCAAGCAGCCATGGCTGGTCAGCTCAACGTGATTGAATCCGCCACTTGGGGATCCAGAAGTGTCGATTGCTTCGAGAA ATTGGAGCAAATTGGTGAAGGCACATATGGGTTTGTCTCAATTTCTCTTCTTCTTTACCTTTCTCCTATCAAAATTTAAT CTTTTTTAATGGGGTGGTTCTTTTTTCGCATCATGGAAGATGAAATTTTTTCAAGTCAATGGTAGTTATGCTTGTTTTTG TTGGGCTAGGTTAAAGTTCAATTTTTTTTTTTTTCATTTGGATATTTGTTCCCAATTTTATGACCCTTTTTTTTGGTTTA AACATCCGGTACTCGTTCACCCTTTGGATGCCGTTAGATTTGGGATTTAATCACAGTTAAGGCTTTGCATCCCTCCCCCA AAGTGTATTGTGTGGGGATCGAACCTGAGAGTTCTTCCCAGACACTCGGTCTGCGTTGCCAACTGAGCTAAAACTAATAC ATTTTATGTTTCTTGAACTCTTTTTCCCATTTAAAGAAAAAAATAGTATTTTTTGCACTTATTGGTGATGTTGTCTGAAG TGGACTGATCTATAACTTCATGTGTTTATGTTTGCAGTCAGGTCTTCATGGCGAAGGAGATCGAAACCGGTGAAATCGTT GCTCTGAAGAGGATACGGATGGACAATGAGAGAGAAGGGGTATGTTAATTCTTTGAGTCTTGAATGTTTAATTTTTTTAC TTAGATTATGGGTGCATAACATATTTTCATTGTACATGTTATTCAGTTGGCCTAAATCAGAATTTGCAGTCAAAGTCTGT TAGTTCTGTATTGTGAATTTCTCCTAGGAACTGTATTGTAAATTTTTTCATTGCAGTTTCCTATAACTGCTATACGAGAA ATCAAAATTTTAAAGAAACTGCACCATGAGAATGTGATCGAGCTGAAAGAAATTGTGACTTCGCCAGGTATACTTTAAAG ATATAGATGTGCTTTGTTTTCAAAATGGTTTAGGATTTATAAATAACATTGTGTTTCTTCTTTCAGGCCCTGAGAGAGAT GGACAAGGAAGGCCAGGCAAGTCATCCGTTCTCACATTATTAGCTAATTACTGAATAATAGTACTCATCTATTTTCATAT TATTAGCCAATTACTGAATAATAGTACATAACATGCTTTATAGCTCTAGCTGTGTGAATATATCCATCAACTCCCATTGG ATTCTCTTTGTTCCATACTAACCTTTTTCACTTGTTTCTCATTGTTGTTTTTGGGATTGCAGATGGTAACAAATATAAAG GTGGTATTTACATGGTCTTTGAATACATGGACCATGATTTAACAGGTCTTGCTGACCGACCTGAAATGAGATTTACAGTT CCTCAAATTAAGGTACGAGTGTTTATACTAATAATTGATTTTTCATATATTAATATTTGTTTATTTTGATGTTGTCTGAG TTGCGTTTCCTTTCTTAAGTGTTATATGAGACAGCTTTTGACGGGGCTTCACTACTGTCATGTAAATCAAGTACTTCATC GTGATATCAAAGGTCTGTGTATTAACAGGGTTATGGTTTTAGATCAGAATGTTGGAAATATTACTACTTTTTGATGTATT TTATTCTGCTGCAGGATCAAATCTTCTTATAGACAATGAAGGAAATTTGAAGCTTGCAGATTTTGGACTGGCACGATCAT TTTCTAGTGAGCAAAATGCAAATCTTACAAATCGTGTCATTACGTTATGGTACAGGTAATTGGTGTCAAATTTTTCTTGA GGAGATTGAATAGGGCAGAGGGAGGGGCTATTTGATTGGCAAGTGCATGTATTGAGTTTGTTTTATTTATGTAGACCGCC TGAGTTGCTTCTGGGGACAACGAAGTATGGACCAGCTGTAGATATGTGGTCTGTTGGGTGCATTTTTGCTGAGCTTCTTC ATGGGAAGCCCATTTTTCCTGGGAAAGATGAGGTTAGTGATATTTTATATATGATAGTTAAGAGAAATGGGTGCCGAAGT GGTGAGTGATTGATGTGGTGTAGTATTTAGGGTAGATTTGATTTTATCCTGTATATTGCCAGTAGGAAAAAAAAGATTCT TTATATTACATTCTGATTCTCCGGATTCAGTCTCTAAATACATCCTGCCATATTCCTTTCTCTGCATATTATAAGCATAT CTCAGTGCAACTCAATTGTTATGATCATTGATGTCTATGTATTTCGAATCTATGGATTCTACTGAAACATAGTACGCTAA TAACAATGTTTGGCTAGACTGTTGCATCTAATTTGCTCAATACTTTTCAGAAATCTCATTATTACATCTTTGTCATATCT TGCTTGTATTATATATGGCCTATGCTTTATATCCTAATGGTAATATTTTTTGGTACAGCTTAAATGTAATACATCTTTTG TTTGTAATTATTGTAGCCAGAACAATTAAACAAAATATTTGAGCTGTGTGGAGCACCAGATGAGGTCAATTGGCCTGGGG TTTCTAAGACACCTTGGTATAATCAATTTAAGCCATCAAGGCCAATGAAAAGACGTTTGAGGGATGTTTTCAGGCAGTAA GTATCAAGGCTTGAGCATCATCACTAAGCATATATGTACTTTTATCCACCTAGGAAATAAGGATACAGTCCATATTCTGT GCTTGTAAATTTATCTAAATAGCTTGTTTCCCTGTGACTTTATAGTTTTGATCGTCATGCTCTAGAATTGTTGGACAAGA TGCTGACACTTGATCCGGCTCAGGTATCATTTCTTCACTTGTGGGTCTGATTTATTAATTGTTAAATGATTTTGAATTGC TATTTTAAGTGCTTCAATTCCCTGTTATTCCTGTTTTATTTTATATCACTCGACCTGTTTTATATGACGAGGTTAGCCAT AGCTACTATTGTTATTTTGTTATTATTATGTATCTCATATACTGACAGATCTCATACTATGCGTAAGATAAAAATGGTGT ACATCTGGTTTCCTTTGTGAGAAACTTTCGTAATGTAATAAAAAAAATTGAGACAAGAAAAAAAAAAGAATTGATGGCAT AATGCTAGTTTAGACGACTTTGAGAAGTTTTTTTTTTTTTTGCTATGAATATGTCATTTGTAACATAGTTGGGTTTGTGT TATGATTTGCTTATTCACCTCTAGGCTATATGCTTTATGAAAATTAATTTTGTTCATGATTTGTTTCTTAATATTTGTTT GTAAATTTGATTTTTGTAGAGAATTACGGCGAAAGATGCACTTGATGCTGAGTATTTCTGGACAGATCCATTACCATGCG ATCCCAAGAGGTAAGACCTAGTTTCTATTTTCAAAATATTAATTTTCCTTGAAATTGTTAGATCGTGATAGGAATAAATA CTTGTTCCATTCACTCCTTCGGCTCCTTCCCTTTTAACTTTATTTTGTTTTATGCAACTAATCATTTACTGGTCAACATT CTTCAACTTGCTACTTCTCTTTTGTGTGGCTTAGTTTACCCAAGTATGAGTCATCACATGAATTTCAAACAAAGAAAAAG CGCCAGCAACAAAGGCAAAATGAAGAAATTGCAAAGCGTCAGAAAATGCAACAACCACAGCCGCACACTCGTCTTCCCCC AATTCAGCAGCCTGGGCAACATGCCCAAATGCGGTCAGGATCTAAGCAGCCAATTCATGGCTCTCAACCTCAAGTTGTTG CAGGACCTTCTCATCATTATGGGAGGGCTCGAGGTCCACCTGGTGGGCCAGGAAGATATCCTCCCAGTGGAAACCCCAGC GGAGGATACAATCACCCAAATCGTGGAGGTCAAGGAGGAGGTGGTTACGGCAGCGGGCCTTATCCTCCTCAAGGGCGAGG GGCACCTTATGGGTCCAGTGGTATGCCTGGTGGTGGTCCTCGTGGTGGAGGTGGCGGTTATGGGGCTGGAGCTCCAAACT ATCCTCAACAAGGCGGTCCATATGGGGGCTCAGCAGCTGGTCGTGGCTCAAACATGATGGGTGGAAATCGCAATCAACAG TATGGTTGGCAGCAATAA
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0054500.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGTCTTTGAATACATGGACCATGATTTAACAGGTCTTGCTGACCGACCTGAAATGAGATTTACAGTTCCTCAAATTAA GTGTTATATGAGACAGCTTTTGACGGGGCTTCACTACTGTCATGTAAATCAAGTACTTCATCGTGATATCAAAGGATCAA ATCTTCTTATAGACAATGAAGGAAATTTGAAGCTTGCAGATTTTGGACTGGCACGATCATTTTCTAGTGAGCAAAATGCA AATCTTACAAATCGTGTCATTACGTTATGGTACAGACCGCCTGAGTTGCTTCTGGGGACAACGAAGTATGGACCAGCTGT AGATATGTGGTCTGTTGGGTGCATTTTTGCTGAGCTTCTTCATGGGAAGCCCATTTTTCCTGGGAAAGATGAGCCAGAAC AATTAAACAAAATATTTGAGCTGTGTGGAGCACCAGATGAGGTCAATTGGCCTGGGGTTTCTAAGACACCTTGGTATAAT CAATTTAAGCCATCAAGGCCAATGAAAAGACGTTTGAGGGATGTTTTCAGGCATTTTGATCGTCATGCTCTAGAATTGTT GGACAAGATGCTGACACTTGATCCGGCTCAGAGAATTACGGCGAAAGATGCACTTGATGCTGAGTATTTCTGGACAGATC CATTACCATGCGATCCCAAGAGTTTACCCAAGTATGAGTCATCACATGAATTTCAAACAAAGAAAAAGCGCCAGCAACAA AGGCAAAATGAAGAAATTGCAAAGCGTCAGAAAATGCAACAACCACAGCCGCACACTCGTCTTCCCCCAATTCAGCAGCC TGGGCAACATGCCCAAATGCGGTCAGGATCTAAGCAGCCAATTCATGGCTCTCAACCTCAAGTTGTTGCAGGACCTTCTC ATCATTATGGGAGGGCTCGAGGTCCACCTGGTGGGCCAGGAAGATATCCTCCCAGTGGAAACCCCAGCGGAGGATACAAT CACCCAAATCGTGGAGGTCAAGGAGGAGGTGGTTACGGCAGCGGGCCTTATCCTCCTCAAGGGCGAGGGGCACCTTATGG GTCCAGTGGTATGCCTGGTGGTGGTCCTCGTGGTGGAGGTGGCGGTTATGGGGCTGGAGCTCCAAACTATCCTCAACAAG GCGGTCCATATGGGGGCTCAGCAGCTGGTCGTGGCTCAAACATGATGGGTGGAAATCGCAATCAACAGTATGGTTGGCAG CAATAA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0054500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MVFEYMDHDLTGLADRPEMRFTVPQIKCYMRQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSSEQNA NLTNRVITLWYRPPELLLGTTKYGPAVDMWSVGCIFAELLHGKPIFPGKDEPEQLNKIFELCGAPDEVNWPGVSKTPWYN QFKPSRPMKRRLRDVFRHFDRHALELLDKMLTLDPAQRITAKDALDAEYFWTDPLPCDPKSLPKYESSHEFQTKKKRQQQ RQNEEIAKRQKMQQPQPHTRLPPIQQPGQHAQMRSGSKQPIHGSQPQVVAGPSHHYGRARGPPGGPGRYPPSGNPSGGYN HPNRGGQGGGGYGSGPYPPQGRGAPYGSSGMPGGGPRGGGGGYGAGAPNYPQQGGPYGGSAAGRGSNMMGGNRNQQYGWQ Q
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Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SUPERFAMILY
SSF56112
1 218 218 5.52E-72
IPR011009
ProSiteProfiles
PS50011
1 210 210 33.941
IPR000719
SMART
SM00220
1 210 210 7.5E-39
IPR000719
Pfam
PF00069
1 210 210 1.6E-51
IPR000719
Gene3D
G3DSA:3.30.200.20
1 240 240 2.0E-79 –
PANTHER
PTHR24056:SF364
1 394 394 3.7E-216 –
CDD
cd07840
1 210 210 8.92213E-152 –
PANTHER
PTHR24056
1 394 394 3.7E-216 –
Gene3D
G3DSA:1.10.510.10
6 232 227 2.0E-79 –
ProSitePatterns
PS00108
45 57 13 -
IPR008271
MobiDBLite
mobidb-lite
221 401 181 - –
MobiDBLite
mobidb-lite
223 248 26 - –
MobiDBLite
mobidb-lite
249 286 38 - –
MobiDBLite
mobidb-lite
387 401 15 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0054500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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