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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0054700 |
| Transcript ID | LotjaGi1g1v0054700.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Non-specific serine/threonine protein kinase; TAIR: AT2G26980.3 CBL-interacting protein kinase 3; Swiss-Prot: sp|Q2V452|CIPK3_ARATH CBL-interacting serine/threonine-protein kinase 3; TrEMBL-Plants: tr|Q53VM3|Q53VM3_LOTJA Non-specific serine/threonine protein kinase; Found in the gene: LotjaGi1g1v0054700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:7734386..7741558) extracted from Lotus japonicus Gifu genome v1.2.
CTCTTTTTATTAATTGAGATGTGAATCGATTCACATACACTCAACACCTATCCAAATAAATATATTTAATGATGAAAACA CAAGATTGGATTAACACATCACCACAGCATTATTATTAACTTGAATCTGGACTGGAAGAGGTAATGGTTGGCTGGAGAGA CATATAGAGATTATATATGGTGGCTGGCTACAACAACCAAAATCCCAGAAAAAATTCTCTTGTTTTTTCTTTGCCCCACA TATATTTATATTAATTTTATCATTATTATTATTAGACACATACATTTGAATTTGATTGAAGCAGATAAGTATTGAGAAGT AACTGTCCAAGTTTCTGCCAGAATTCTATGCACAGAAAATGCAAATATCAGGCACATGAGTTTTGTCTAGTTGCAGAGCA GTCGTTGGTAGTTGTCTCAAAATTCTCTTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTGCCTTTTCCTCATAATCAAA AGCCAGAGCCATTTTTGCAGTGTGCATCATCATCATCTAGCTACCTTTCCTTCATTCCTTCACTGACCTGCAGAATTTCA GACATTCTTATCTCCACAGAGTTTGTTGTTGAAGTACTTTTTCTTCTCTCTCTCTCTCTCTTGCTCTGTTTCTCTCACAT GAGCCTTAGGCTCTATATATACTTGAGTGGTACTTGGAATTTGACAACTTGATCTGGGTTTGCTTTGTTTTTTCATTATC ACCACCACCCCTTTGAGAAATAATTGGTTCTATGAACAGTCTTTCTCTTCATTTTTCCCAAATTACTGTAAAGTTCCTTT TTTCCTACATTTGTGTTGATGGGTTTCTGTGATTTGAAGAGCCAAATTTTTTTTCTCTGTTTTGGTGCCCTTCTTCTCAA ACCCCATTTGTTCTGCTGTAAAATAATTTAGTCCTGTTTGCCCAATTTTGTTTGATTCTATAGTGATGGAAAGTTGATAC TTTTGAGTGATTCATAGTGATTTTTTAACTTTTGGTGACCCTGAATTTTGTTTTTGAACATTGATGGTTTTCTTACAAAT CTAGTTTCTGACAAATTAGGGATTTCATAGAGTGTGCTATGTGTGTTAACTGTTAAATTGACTGTTTGTTTCATATTCAA GCTGAATTCTGGTTGTGAGTTTATCATTTACCAGAAGACAGACTTTGAGGTTATTTCTCATCCCAACAATTTTTCAGTTG TCTCTGCAACTTAAATCCAGCATCAATGGTTTTTCAAATTTCTGCATTACTGGTTTTATTGTGCCTAACACTAAGAATGA TTGCTCCTGTTAAAGTAGGGAAGAGGGTTAATTTGCATCTTTGGCTTTGAAATTATAGTTTTGCTTAAAACCATAAGCAT TTATCAAACACACATCGCAATTTAGCACATAAGATTTGGACTAAGTGTCTTTTTTATTTCATCATTCCACTTGTGGATAA AATTTAGTTAGCAACTGAATTCTGATATGCATTTCAGGTATATTCCTTATAAGTGTGTAGAAGTTCAAGTTTATAGAGAA TGAATCAGCCTAAGATTAAGCGCCGTGTGGGTAAATATGAGGTTGGGAGGACCATTGGTGAGGGAACATTTGCAAAGGTG AAATTTGCAAGGAACTCTGAGACAGGGGAAGCTGTGGCTCTCAAAATTCTTGACAAAGAGAAGGTCCTCAAGCACAAGAT GGCTGAACAGGTAGTGTTGAGTAACATGATGTTTCGATCAGCTTCTATTTCTTCAGAATCAATTCTGGAACTCAAAAGCT ACTCACAGGAGCTTCTCCCCAGAATTGATTCTGTCTCTTAATCAATCAATTGTAGAAGAATTTTAGTAAATCAATTGTAG AAGAATTTCAGAACATGCATTTTGTTCAATTCTTAGGAAGCATACAATTTTGTGACATCATCAATACTGCTTCCTCACAT TTTCCTAAACCTTTCTAGATGCTGACAAAATCTTCTTTTTGTTGAACATATTTTAATGTGGGAGGTTCTATACTTCAGAT CTGTGTTGTTATTTTATATTGATAGTTGTTTTAGACCCTCACATGACATGATGGAGTCAAGTCTCATAAAATGTTTTTAA TGTATTTTTGCAGATTAAGCGGGAAGTAGCTACAATGAAGTTAATCAAGCATCCAAATGTGGTTCAGCTGTATGAGGTCT CTCTCCCTCTCCCCCTCTCTCTCTCACGTGGAATATCTTGTCTACAACTTTTTAAAAATATTTTCTACCTTTTTCATCTC TTGATTTATTCTTGCCCCAAGTTCTGCTACTTTTAAAAGCAGAAGATGGTAACTATTGATTAAAAAGTTACTATTTCACT AAGAACACTGCTTAGTGCTTACCTTCAAAAAGTTCTCATAGTATCTTGGGAAGTTATCTGAACCTTGAAGCCATATGGGA GGCTTTGAGATTTTTTGAAAAGACGTTAACAATATCCTCGTTCACTTGAAGATTGAAAGAATATTGAATACTTGAATCAT CACTATATTGATAGACTATGCTTAAATAGTTATAAACTGCTGTCCAAGACTAAAAGATATGAAACAAACATGTCTCATTT TTCTATACCTTACTGTTTGATTTTGTAACTTTTGGGCGAATATGATGAACAATAATAATCTTTGAGATGTCATGAATTTA TCAAGTGAAGTCTGTAAGCACCTAATTGATGATATAAGATCCCAGTGATAATTAGACAGGCCTTACTCCATTCTTTCCTC TGATAATGACTAATCAGTACTCAATTTAGAGATGATGATCTTGATCAGCGGAGTGATTGACATCAAACATATTACTTTGG CTGTTTGGCCTACTTTGTCAATCACCCACGGTCACTACAGGCCTTAAATTTACTGATTGTGCTGATTTGTATGCTTGTCA TTTAGCATTTGCACTAGTGGAAACATTCCAGCTAAACACAAATTACTTCATTAGGAAGTAAATCTGCAATTACAAATCAA ATTAATTCTCAGCACTGTTTACTCTTTCGCCAAATTTTGTTTCTAAAATTGCAACTTAATTATTTGCACAGGTCTTGGGA AGCAAGACGAAAATATATATGGTTTTGGAGTTTGTGACTGGGGGAGAGCTCTTCGACAAAATTGTGAGTAAATGAACTCT TCTTACTTTTTTCATTTTCAATTGGTTATAGAGCTTCTTGAGTAAAAAGTGAAAAAATGGTGAGACTCACTGGCCATATT TGGAGTTAGCTAATCCTGATCCTTCATAGTTTCTTCAATTGTCATTATCAGCATCATTTGTTGGCATTCTTGTAGATAAG GTTGCTTTGGATCTTAGTACATAAATTGCCTTTATTTATGAGGGAAAAATGCTGTATATTGTCTAATGGACTTTTTGAAG GTAAACCATGGACGGATGTGTGAAGATGAAGCACGTAGATATTTCCAGCAACTGATAAATACAGTTGATTATTGCCATAG CAGGGGTGTCTACCACAGAGATCTTAAGGTAAGGTCCATTTGCCTGACGCTGACACATATTTGCAGATACCAGATTATTT TTCTAAATTTTGATATGATAAAAAATAACCTCTAACATGAGTTTTGTTACTATTTTTCCAGCCAGAAAATTTGCTATTAG ATGCTTGCGGGAATCTTAAAGTTTCTGATTTTGGGTTGAGTGCACTCTCCCAGCAAATTAAGGTGATAATGATTCATTTC ATTCTGACATTTACTTGTCTTTTCTGTTTATCTTTGTTCATGTAAAGTTAGTTATTCAAGGTTATTCTTGTGCAAAATTA CATTAATGATGTACAAGTCTATGAACCTGAAACTTAAATAATTCCCATTGGTAGCAAAAAATGTTACAATTTTATTAGTG CGGAATACATAGACTTGAGAACTTTGAAATTCAGAAGACAATATGTGACTATGAAGTTACCATTGTTTCCAAGAGAGTTT GACTAGTATCTTACAAAATTGTGATCTTGACAGGATGATGGACTACTACATACTACATGTGGAACTCCAAATTATGTTGC TCCAGAGGTACAGATCAATGCCGTTTCACATCATGCTACATTGTTGTGAATTACATTCCAAAATTCGTATATTTCGAGTC ACTCTTCTAAGTTCTAAGTTCTAACTATATACTCTTGTTATGTAGGTCCTTAATGATAAAGGCTATGATGGAGCAACTGC AGATTTGTGGTCATGTGGGGTGATTCTCTTTGTATTGGTTGCGGGTTACTTGCCTTTTGATGACCCTAATCTTATGGAAT TGTATAAAAAAGTAAGTGCAGTTTGAACTTTGTTATACAATTTTACCATTTCCCTTGTTTTTCCTTTTTATCACTTTCAT TTCTTGATCCACAGATCTCAGCAGCAGAATTTACTTGCCCCCCATGGCTTTCTTTCAGTGCCCGGAAATTGATAACTCGA ATCTTGGATCCCAATCCCATGACTGTAAGAAACAACATTTGATTATCTTTCAGCTTTTTATCATGTAAACTTGCATGTCT GTTCTGAATGTGAAAGGTTCATTCTACTTATAAGTTATAACAAAAATTGTAACCTTCTACACTCTCTTGGTTGCATCCAC AACAAAAGGTGAACAAGAAAAGAAATATGGAGAACTAATCATCAATCTACATACTACATTGTCACGTTTATTTCTTTGTA CTGGTAAAATTAGGGTTTGTATTTATGATTTTCTCTAACTATATGGCAGCGTATCACTATAGCTGAGATTCTGGAAGATG AATGGTTTAAGAAAGATTATAAGCCTCCAATTTTCCAGGAGAATGGGGAAACCAACCTCGACGATGTAGAAGCCGTCTTT AAAGATTCTGAAGTATGTTGAAGATTATTAGATATGGTTTTTATATTGTTTTTTGTGTAAATCTGGAATATTTTCTCATG AAGGATTTTGCTCATTTATTCAGGAGCACCATGTGACAGAGAAGAAAGAAGAGCAGCCAACAGCAATGAATGCATTCGAG TTAATTTCCATGTCCAAAGGGCTCAACCTTGAAAACTTGTTTGATGTTGAGCAGGTTCACATTTTCACATGATTAGATAC TTTCTAAGTGTGTGTTTGGGTGCCAATTGAGTGCAATGTGAATGAACTTTTCATCTTAATCCATCAAAAGAGTTTCGTTC AGTTTTTGCCTTTTAAGTATGCGCTAATGTCTGTTGCAATATCCAAACACAATCTAAATTATTTTATGATTGTGGTGGAT ATGTTTAATTCAAATACAGGGATAACATTGGCATTACATTAATGTTAACATGTACACTAGTTGTTTCTTTTGATAGACAA AAACCTAGTTAACTTTGTAGAAACTTGAGATGAGAACTTATCTTTGAATCCCAACATGAGCATAGTATGAGAAAGTTACT GCATTTGTTTTATTCTTATGTCATTTACTTCAGGGATTTAAAAGGGAAACAAGATTCACATCAAAGTCCCCTGCCAATGA GATAATCAGCAAGATTGAAGAAGCTGCAAAACCTCTTGGCTTTGATGTGCAGAAGAAAAATTACAAGGTAAGCCATGCTT GTGCAACTTAATACAAGGCTCTACTCAGAGTTAGCTCTTCTATATATAAAGGCATTTTGAATTTTTTGATTTGTGAATCT AATATCAAACCATCAACTGCAGATGAGGCTTGCAAATGTGAAAGCTGGAAGGAAGGGAAACCTTAATGTTGCCACAGAGG TATTATGTTATCATTATATGATCACCATTTTTGCTTTTTGGTGATGTGGGACATTGTTTGTCATATTATTATCATGTTAA AAGCACTCATTCTCAACAGGTGTTTCAAGTGGCACCTTCTCTTCACATGGTTGAGGTGCGGAAAGCTAAAGGCGATACAT TGGAGTTCCATAAGGTGCACTTTTGCCCCCTTTGCTCAATTGCTTTTACTCTGATTCTGTTTGAGTACAGATTTGTAGAA TAGTTTTTTGTTTTTTAACATAGAAAAATAGAAAAACTTAATTGATATGAACTGTTTTTAAAAAACTGTTCTTAGAAATA GTTGTTATTTTTCTGATATTAAAACCAAAGTTCTAAACGTCCGGTTTTTGTTGTTAGTTTTCAAGTCACAGACAGACTAA GGTCTTTCAACTTTGTAAACATCTCGTGCAATCAGATTTGAAAATGGGTTTTAACTTTTAAATTCAAAAAACTGAGAATG AAATCAAACAACTAAGAAGGAAATCAAACTGAAAATAGGACCATATGTTATTATGCAAAATAGGATTGGATTCAAAAGCT TCTGAAAATGTCTGCTTTTCCTTTACCACTTTTTCTCTGATTTCTTGGGTTTTTAGAAACCTTCTAATTCTGTTCTTGAT ACCAGAATAATGAAGTTTGCACACTTGTTTTCACTTTCCAATCTAATTGAGACCTTGTATGCAGTTCTACAAAAAACTCT CGACATGCCTGGAAGATGTTGTTTGGAAAACAGAAGATGACATGCAAAAGCAAGAAGCAAAATGATGTTAATATCAATAT TATATATCTGGTGTAATTTTCTTCATGTCTTAAGTCCTCATGATATTTTCCAATATATCTTCATTCGTTATTGGCTTCCT CCTTGTAGGTTTGTTTGTTTGGACATTACATGTTCCATATATTTAGTTCCATGCTATTATTTGTAAAGCATGCAGAGTTT ATGTAAGAATTTATCCATCAACAGTTCCTGTTATGTTCATGAAACAAAAAAAATTATATAAGAGAGTGTGTAGATTGTAT ATATATGTGTCTTCCTTTTGCTGCTACTTTCTAATTTCTATTCAGCAATATGGTAAGATCAGTACAGCTACTGCAAAATA AAGACAAAAGACTGAAGGGAAGATGTCTAGAGAAGATATCTGCTGAATACTGGAAAAAAAAGTGCACACATACTGATTAG TATGCCACAAATTTTTAAGTCTATTACGAAATCCATGAATGGATGATGATGGTGCTTTGAGAGGAACCCATAGGATTTGG TGATCACTGATTAGTATGCCAGTATCTTTCATGTGTGCTCTTAAAATGATATTTGATTTTTTTTAAACTACCCGTTATTT GGTCACTCTTTGAATGCCGACTATTTCAATCAGGATTTAATTAGTCACATTTAAAGAACTTCATCCCTCTTCTGGGTGCA TTATTCGAGGCTCGATTTGACAGCTTTTCTCACACACTTAGTGATGTCAACTA
CDS sequence (LotjaGi1g1v0054700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAATCAGCCTAAGATTAAGCGCCGTGTGGGTAAATATGAGGTTGGGAGGACCATTGGTGAGGGAACATTTGCAAAGGT GAAATTTGCAAGGAACTCTGAGACAGGGGAAGCTGTGGCTCTCAAAATTCTTGACAAAGAGAAGGTCCTCAAGCACAAGA TGGCTGAACAGATTAAGCGGGAAGTAGCTACAATGAAGTTAATCAAGCATCCAAATGTGGTTCAGCTGTATGAGGTCTTG GGAAGCAAGACGAAAATATATATGGTTTTGGAGTTTGTGACTGGGGGAGAGCTCTTCGACAAAATTGTAAACCATGGACG GATGTGTGAAGATGAAGCACGTAGATATTTCCAGCAACTGATAAATACAGTTGATTATTGCCATAGCAGGGGTGTCTACC ACAGAGATCTTAAGCCAGAAAATTTGCTATTAGATGCTTGCGGGAATCTTAAAGTTTCTGATTTTGGGTTGAGTGCACTC TCCCAGCAAATTAAGGATGATGGACTACTACATACTACATGTGGAACTCCAAATTATGTTGCTCCAGAGGTCCTTAATGA TAAAGGCTATGATGGAGCAACTGCAGATTTGTGGTCATGTGGGGTGATTCTCTTTGTATTGGTTGCGGGTTACTTGCCTT TTGATGACCCTAATCTTATGGAATTGTATAAAAAAATCTCAGCAGCAGAATTTACTTGCCCCCCATGGCTTTCTTTCAGT GCCCGGAAATTGATAACTCGAATCTTGGATCCCAATCCCATGACTCGTATCACTATAGCTGAGATTCTGGAAGATGAATG GTTTAAGAAAGATTATAAGCCTCCAATTTTCCAGGAGAATGGGGAAACCAACCTCGACGATGTAGAAGCCGTCTTTAAAG ATTCTGAAGAGCACCATGTGACAGAGAAGAAAGAAGAGCAGCCAACAGCAATGAATGCATTCGAGTTAATTTCCATGTCC AAAGGGCTCAACCTTGAAAACTTGTTTGATGTTGAGCAGGGATTTAAAAGGGAAACAAGATTCACATCAAAGTCCCCTGC CAATGAGATAATCAGCAAGATTGAAGAAGCTGCAAAACCTCTTGGCTTTGATGTGCAGAAGAAAAATTACAAGATGAGGC TTGCAAATGTGAAAGCTGGAAGGAAGGGAAACCTTAATGTTGCCACAGAGGTGTTTCAAGTGGCACCTTCTCTTCACATG GTTGAGGTGCGGAAAGCTAAAGGCGATACATTGGAGTTCCATAAGTTCTACAAAAAACTCTCGACATGCCTGGAAGATGT TGTTTGGAAAACAGAAGATGACATGCAAAAGCAAGAAGCAAAATGA
Protein sequence (LotjaGi1g1v0054700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNQPKIKRRVGKYEVGRTIGEGTFAKVKFARNSETGEAVALKILDKEKVLKHKMAEQIKREVATMKLIKHPNVVQLYEVL GSKTKIYMVLEFVTGGELFDKIVNHGRMCEDEARRYFQQLINTVDYCHSRGVYHRDLKPENLLLDACGNLKVSDFGLSAL SQQIKDDGLLHTTCGTPNYVAPEVLNDKGYDGATADLWSCGVILFVLVAGYLPFDDPNLMELYKKISAAEFTCPPWLSFS ARKLITRILDPNPMTRITIAEILEDEWFKKDYKPPIFQENGETNLDDVEAVFKDSEEHHVTEKKEEQPTAMNAFELISMS KGLNLENLFDVEQGFKRETRFTSKSPANEIISKIEEAAKPLGFDVQKKNYKMRLANVKAGRKGNLNVATEVFQVAPSLHM VEVRKAKGDTLEFHKFYKKLSTCLEDVVWKTEDDMQKQEAK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 194 | 194 | - | – | |
| PANTHER | 3 | 434 | 432 | 9.9E-245 | – | |
| Gene3D | 3 | 92 | 90 | 6.2E-32 | – | |
| PANTHER | 3 | 434 | 432 | 9.9E-245 | – | |
| SUPERFAMILY | 9 | 296 | 288 | 7.15E-91 | ||
| CDD | 12 | 267 | 256 | 1.18965E-170 | – | |
| ProSiteProfiles | 13 | 268 | 256 | 51.17 | ||
| Pfam | 13 | 268 | 256 | 1.6E-71 | ||
| SMART | 13 | 268 | 256 | 2.4E-106 | ||
| ProSitePatterns | 19 | 42 | 24 | - | ||
| Gene3D | 93 | 275 | 183 | 2.3E-67 | – | |
| ProSitePatterns | 132 | 144 | 13 | - | ||
| Phobius | 195 | 214 | 20 | - | – | |
| Phobius | 215 | 441 | 227 | - | – | |
| Gene3D | 305 | 430 | 126 | 2.6E-50 | – | |
| ProSiteProfiles | 306 | 330 | 25 | 13.221 | ||
| Pfam | 308 | 367 | 60 | 1.1E-23 | ||
| CDD | 312 | 421 | 110 | 3.56886E-51 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. | ||
| Biological process | Signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. |
Expression pattern of LotjaGi1g1v0054700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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