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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0054700 |
| Transcript ID | LotjaGi1g1v0054700.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Non-specific serine/threonine protein kinase; TAIR: AT2G26980.4 CBL-interacting protein kinase 3; Swiss-Prot: sp|Q2V452|CIPK3_ARATH CBL-interacting serine/threonine-protein kinase 3; TrEMBL-Plants: tr|Q53VM3|Q53VM3_LOTJA Non-specific serine/threonine protein kinase; Found in the gene: LotjaGi1g1v0054700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:7735905..7740328) extracted from Lotus japonicus Gifu genome v1.2.
ATGAATCAGCCTAAGATTAAGCGCCGTGTGGGTAAATATGAGGTTGGGAGGACCATTGGTGAGGGAACATTTGCAAAGGT GAAATTTGCAAGGAACTCTGAGACAGGGGAAGCTGTGGCTCTCAAAATTCTTGACAAAGAGAAGGTCCTCAAGCACAAGA TGGCTGAACAGGTAGTGTTGAGTAACATGATGTTTCGATCAGCTTCTATTTCTTCAGAATCAATTCTGGAACTCAAAAGC TACTCACAGGAGCTTCTCCCCAGAATTGATTCTGTCTCTTAATCAATCAATTGTAGAAGAATTTTAGTAAATCAATTGTA GAAGAATTTCAGAACATGCATTTTGTTCAATTCTTAGGAAGCATACAATTTTGTGACATCATCAATACTGCTTCCTCACA TTTTCCTAAACCTTTCTAGATGCTGACAAAATCTTCTTTTTGTTGAACATATTTTAATGTGGGAGGTTCTATACTTCAGA TCTGTGTTGTTATTTTATATTGATAGTTGTTTTAGACCCTCACATGACATGATGGAGTCAAGTCTCATAAAATGTTTTTA ATGTATTTTTGCAGATTAAGCGGGAAGTAGCTACAATGAAGTTAATCAAGCATCCAAATGTGGTTCAGCTGTATGAGGTC TCTCTCCCTCTCCCCCTCTCTCTCTCACGTGGAATATCTTGTCTACAACTTTTTAAAAATATTTTCTACCTTTTTCATCT CTTGATTTATTCTTGCCCCAAGTTCTGCTACTTTTAAAAGCAGAAGATGGTAACTATTGATTAAAAAGTTACTATTTCAC TAAGAACACTGCTTAGTGCTTACCTTCAAAAAGTTCTCATAGTATCTTGGGAAGTTATCTGAACCTTGAAGCCATATGGG AGGCTTTGAGATTTTTTGAAAAGACGTTAACAATATCCTCGTTCACTTGAAGATTGAAAGAATATTGAATACTTGAATCA TCACTATATTGATAGACTATGCTTAAATAGTTATAAACTGCTGTCCAAGACTAAAAGATATGAAACAAACATGTCTCATT TTTCTATACCTTACTGTTTGATTTTGTAACTTTTGGGCGAATATGATGAACAATAATAATCTTTGAGATGTCATGAATTT ATCAAGTGAAGTCTGTAAGCACCTAATTGATGATATAAGATCCCAGTGATAATTAGACAGGCCTTACTCCATTCTTTCCT CTGATAATGACTAATCAGTACTCAATTTAGAGATGATGATCTTGATCAGCGGAGTGATTGACATCAAACATATTACTTTG GCTGTTTGGCCTACTTTGTCAATCACCCACGGTCACTACAGGCCTTAAATTTACTGATTGTGCTGATTTGTATGCTTGTC ATTTAGCATTTGCACTAGTGGAAACATTCCAGCTAAACACAAATTACTTCATTAGGAAGTAAATCTGCAATTACAAATCA AATTAATTCTCAGCACTGTTTACTCTTTCGCCAAATTTTGTTTCTAAAATTGCAACTTAATTATTTGCACAGGTCTTGGG AAGCAAGACGAAAATATATATGGTTTTGGAGTTTGTGACTGGGGGAGAGCTCTTCGACAAAATTGTGAGTAAATGAACTC TTCTTACTTTTTTCATTTTCAATTGGTTATAGAGCTTCTTGAGTAAAAAGTGAAAAAATGGTGAGACTCACTGGCCATAT TTGGAGTTAGCTAATCCTGATCCTTCATAGTTTCTTCAATTGTCATTATCAGCATCATTTGTTGGCATTCTTGTAGATAA GGTTGCTTTGGATCTTAGTACATAAATTGCCTTTATTTATGAGGGAAAAATGCTGTATATTGTCTAATGGACTTTTTGAA GGTAAACCATGGACGGATGTGTGAAGATGAAGCACGTAGATATTTCCAGCAACTGATAAATACAGTTGATTATTGCCATA GCAGGGGTGTCTACCACAGAGATCTTAAGGTAAGGTCCATTTGCCTGACGCTGACACATATTTGCAGATACCAGATTATT TTTCTAAATTTTGATATGATAAAAAATAACCTCTAACATGAGTTTTGTTACTATTTTTCCAGCCAGAAAATTTGCTATTA GATGCTTGCGGGAATCTTAAAGTTTCTGATTTTGGGTTGAGTGCACTCTCCCAGCAAATTAAGGTGATAATGATTCATTT CATTCTGACATTTACTTGTCTTTTCTGTTTATCTTTGTTCATGTAAAGTTAGTTATTCAAGGTTATTCTTGTGCAAAATT ACATTAATGATGTACAAGTCTATGAACCTGAAACTTAAATAATTCCCATTGGTAGCAAAAAATGTTACAATTTTATTAGT GCGGAATACATAGACTTGAGAACTTTGAAATTCAGAAGACAATATGTGACTATGAAGTTACCATTGTTTCCAAGAGAGTT TGACTAGTATCTTACAAAATTGTGATCTTGACAGGATGATGGACTACTACATACTACATGTGGAACTCCAAATTATGTTG CTCCAGAGGTACAGATCAATGCCGTTTCACATCATGCTACATTGTTGTGAATTACATTCCAAAATTCGTATATTTCGAGT CACTCTTCTAAGTTCTAAGTTCTAACTATATACTCTTGTTATGTAGGTCCTTAATGATAAAGGCTATGATGGAGCAACTG CAGATTTGTGGTCATGTGGGGTGATTCTCTTTGTATTGGTTGCGGGTTACTTGCCTTTTGATGACCCTAATCTTATGGAA TTGTATAAAAAAGTAAGTGCAGTTTGAACTTTGTTATACAATTTTACCATTTCCCTTGTTTTTCCTTTTTATCACTTTCA TTTCTTGATCCACAGATCTCAGCAGCAGAATTTACTTGCCCCCCATGGCTTTCTTTCAGTGCCCGGAAATTGATAACTCG AATCTTGGATCCCAATCCCATGACTGTAAGAAACAACATTTGATTATCTTTCAGCTTTTTATCATGTAAACTTGCATGTC TGTTCTGAATGTGAAAGGTTCATTCTACTTATAAGTTATAACAAAAATTGTAACCTTCTACACTCTCTTGGTTGCATCCA CAACAAAAGGTGAACAAGAAAAGAAATATGGAGAACTAATCATCAATCTACATACTACATTGTCACGTTTATTTCTTTGT ACTGGTAAAATTAGGGTTTGTATTTATGATTTTCTCTAACTATATGGCAGCGTATCACTATAGCTGAGATTCTGGAAGAT GAATGGTTTAAGAAAGATTATAAGCCTCCAATTTTCCAGGAGAATGGGGAAACCAACCTCGACGATGTAGAAGCCGTCTT TAAAGATTCTGAAGTATGTTGAAGATTATTAGATATGGTTTTTATATTGTTTTTTGTGTAAATCTGGAATATTTTCTCAT GAAGGATTTTGCTCATTTATTCAGGAGCACCATGTGACAGAGAAGAAAGAAGAGCAGCCAACAGCAATGAATGCATTCGA GTTAATTTCCATGTCCAAAGGGCTCAACCTTGAAAACTTGTTTGATGTTGAGCAGGTTCACATTTTCACATGATTAGATA CTTTCTAAGTGTGTGTTTGGGTGCCAATTGAGTGCAATGTGAATGAACTTTTCATCTTAATCCATCAAAAGAGTTTCGTT CAGTTTTTGCCTTTTAAGTATGCGCTAATGTCTGTTGCAATATCCAAACACAATCTAAATTATTTTATGATTGTGGTGGA TATGTTTAATTCAAATACAGGGATAACATTGGCATTACATTAATGTTAACATGTACACTAGTTGTTTCTTTTGATAGACA AAAACCTAGTTAACTTTGTAGAAACTTGAGATGAGAACTTATCTTTGAATCCCAACATGAGCATAGTATGAGAAAGTTAC TGCATTTGTTTTATTCTTATGTCATTTACTTCAGGGATTTAAAAGGGAAACAAGATTCACATCAAAGTCCCCTGCCAATG AGATAATCAGCAAGATTGAAGAAGCTGCAAAACCTCTTGGCTTTGATGTGCAGAAGAAAAATTACAAGGTAAGCCATGCT TGTGCAACTTAATACAAGGCTCTACTCAGAGTTAGCTCTTCTATATATAAAGGCATTTTGAATTTTTTGATTTGTGAATC TAATATCAAACCATCAACTGCAGATGAGGCTTGCAAATGTGAAAGCTGGAAGGAAGGGAAACCTTAATGTTGCCACAGAG GTATTATGTTATCATTATATGATCACCATTTTTGCTTTTTGGTGATGTGGGACATTGTTTGTCATATTATTATCATGTTA AAAGCACTCATTCTCAACAGGTGTTTCAAGTGGCACCTTCTCTTCACATGGTTGAGGTGCGGAAAGCTAAAGGCGATACA TTGGAGTTCCATAAGGTGCACTTTTGCCCCCTTTGCTCAATTGCTTTTACTCTGATTCTGTTTGAGTACAGATTTGTAGA ATAGTTTTTTGTTTTTTAACATAG
CDS sequence (LotjaGi1g1v0054700.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAATCAGCCTAAGATTAAGCGCCGTGTGGGTAAATATGAGGTTGGGAGGACCATTGGTGAGGGAACATTTGCAAAGGT GAAATTTGCAAGGAACTCTGAGACAGGGGAAGCTGTGGCTCTCAAAATTCTTGACAAAGAGAAGGTCCTCAAGCACAAGA TGGCTGAACAGATTAAGCGGGAAGTAGCTACAATGAAGTTAATCAAGCATCCAAATGTGGTTCAGCTGTATGAGGTCTTG GGAAGCAAGACGAAAATATATATGGTTTTGGAGTTTGTGACTGGGGGAGAGCTCTTCGACAAAATTGTAAACCATGGACG GATGTGTGAAGATGAAGCACGTAGATATTTCCAGCAACTGATAAATACAGTTGATTATTGCCATAGCAGGGGTGTCTACC ACAGAGATCTTAAGCCAGAAAATTTGCTATTAGATGCTTGCGGGAATCTTAAAGTTTCTGATTTTGGGTTGAGTGCACTC TCCCAGCAAATTAAGGATGATGGACTACTACATACTACATGTGGAACTCCAAATTATGTTGCTCCAGAGGTCCTTAATGA TAAAGGCTATGATGGAGCAACTGCAGATTTGTGGTCATGTGGGGTGATTCTCTTTGTATTGGTTGCGGGTTACTTGCCTT TTGATGACCCTAATCTTATGGAATTGTATAAAAAAATCTCAGCAGCAGAATTTACTTGCCCCCCATGGCTTTCTTTCAGT GCCCGGAAATTGATAACTCGAATCTTGGATCCCAATCCCATGACTCGTATCACTATAGCTGAGATTCTGGAAGATGAATG GTTTAAGAAAGATTATAAGCCTCCAATTTTCCAGGAGAATGGGGAAACCAACCTCGACGATGTAGAAGCCGTCTTTAAAG ATTCTGAAGAGCACCATGTGACAGAGAAGAAAGAAGAGCAGCCAACAGCAATGAATGCATTCGAGTTAATTTCCATGTCC AAAGGGCTCAACCTTGAAAACTTGTTTGATGTTGAGCAGGGATTTAAAAGGGAAACAAGATTCACATCAAAGTCCCCTGC CAATGAGATAATCAGCAAGATTGAAGAAGCTGCAAAACCTCTTGGCTTTGATGTGCAGAAGAAAAATTACAAGGTGTTTC AAGTGGCACCTTCTCTTCACATGGTTGAGGTGCGGAAAGCTAAAGGCGATACATTGGAGTTCCATAAGATTTGTAGAATA GTTTTTTGTTTTTTAACATAG
Protein sequence (LotjaGi1g1v0054700.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNQPKIKRRVGKYEVGRTIGEGTFAKVKFARNSETGEAVALKILDKEKVLKHKMAEQIKREVATMKLIKHPNVVQLYEVL GSKTKIYMVLEFVTGGELFDKIVNHGRMCEDEARRYFQQLINTVDYCHSRGVYHRDLKPENLLLDACGNLKVSDFGLSAL SQQIKDDGLLHTTCGTPNYVAPEVLNDKGYDGATADLWSCGVILFVLVAGYLPFDDPNLMELYKKISAAEFTCPPWLSFS ARKLITRILDPNPMTRITIAEILEDEWFKKDYKPPIFQENGETNLDDVEAVFKDSEEHHVTEKKEEQPTAMNAFELISMS KGLNLENLFDVEQGFKRETRFTSKSPANEIISKIEEAAKPLGFDVQKKNYKVFQVAPSLHMVEVRKAKGDTLEFHKICRI VFCFLT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 194 | 194 | - | – | |
| PANTHER | 2 | 372 | 371 | 3.1E-222 | – | |
| PANTHER | 2 | 372 | 371 | 3.1E-222 | – | |
| Gene3D | 3 | 92 | 90 | 5.4E-32 | – | |
| SUPERFAMILY | 9 | 296 | 288 | 5.66E-91 | ||
| CDD | 12 | 267 | 256 | 1.93776E-171 | – | |
| ProSiteProfiles | 13 | 268 | 256 | 51.17 | ||
| SMART | 13 | 268 | 256 | 2.4E-106 | ||
| Pfam | 13 | 268 | 256 | 1.3E-71 | ||
| ProSitePatterns | 19 | 42 | 24 | - | ||
| Gene3D | 93 | 275 | 183 | 1.9E-67 | – | |
| ProSitePatterns | 132 | 144 | 13 | - | ||
| Phobius | 195 | 214 | 20 | - | – | |
| Phobius | 215 | 406 | 192 | - | – | |
| Gene3D | 305 | 404 | 100 | 9.4E-30 | – | |
| ProSiteProfiles | 306 | 330 | 25 | 13.221 | ||
| Pfam | 308 | 367 | 60 | 9.7E-24 | ||
| CDD | 312 | 399 | 88 | 1.2081E-38 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. | ||
| Biological process | Signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. |
Expression pattern of LotjaGi1g1v0054700.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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