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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0056100 |
| Transcript ID | LotjaGi1g1v0056100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Leucine-rich repeat receptor-like protein kinase family; TAIR: AT3G43740.1 Leucine-rich repeat (LRR) family protein; Swiss-Prot: sp|B8BB68|BAK1_ORYSI LRR receptor kinase BAK1; TrEMBL-Plants: tr|I3STZ2|I3STZ2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0056100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:7881627..7885030) extracted from Lotus japonicus Gifu genome v1.2.
AGTTGATATTCTTCTTCCTTCTTTTTATTTCATTTTCTCTCTCTCCTTCCGATCTTATTTAATAGCAAACCTTGAACATC ATCATATAACAACTTCTTCCTTGTGTTCAATTCAGATAGAAAAATATGGCACCAACATTTTCCTTCTTCTTCTTATGCAT TTCCCTAACCCTAATTCCCTTCTCCATTGCTAATGTCGAAAGTGATGCTCTCTATGCCTTTAAGCAAAGCCTTTCTGACC CCAATAACGCTCTTGAGTCTTGGGATAATTCCCTTGTTGATCCTTGTACTTGGTTCCATATCACTTGTGATGGAGACCAA AGTGGTAGTGTTATTCGAGTGTGTGTATCTATTTCTCCCCTTTTTACGTTCTTCTTTATCTCTCAATTTAATCCTGATTC TTGTTGTGTTTTATGTTTTATTAATTTGATCGTTAACAATTGATCAAGCTCGTATTTGTGGATTAGAGATTAAATCATCC ATGATGGGATTGATTTAATTTTTATGTTTCAAAATAAAACCAAAAACTCGGCTTCGCTATACATGAAATGATATCCTTTT ATTGATTAGAATCCTCTCACATGAATTTTTTTTCATGTTCTCTCATGCTGAATATTTGTGTCCATCTTTCTCTTCACATG TATGCATTAAATAGATATAAGTGCGTCTATTTAATATTTATGAAGAAAGAAATACACACATAATTTCAACATATATAAGG GAACAAGAGAGGATTTTCAGATGAGATTATAATCAATCATTTTATACTTTCATATAGCATTTCAATGCTTTAGCGCACTA CTATCTCTTTTATGTTTACTTTTTGGACATTCGAGTATTCTTGCAACCAGCTCAATTTTGGTACTTTTTCAGGGATCTTT CAAATCAGAACCTAACTGGACATTTGGTACCTGACCTTGCAAATCTGCATGCTCTACAATACCTGTATGTTATATAATAT TTTTCTATAACATGTTTGATTTCAAGATTTGCATACAATCTGAACATGTTATTAAACACTCTGTTTATGTTGATTTTGTG ACTCCAAGAGTTAAATGTGTTCAGGTTATTGTTGAAATAATTGGTCTTTTAGAGTTAAGACTTGTTTGAATCCTGATTTT GCTTTTTTGCAATTAAAATACATTTTCCAAAACAATTCTCAAAGCATATTTTTCAAAAAAAAAAGAAAAAAATTGTGTGA GTGAGGTGTTTTACAACATTAAAAAATTGTAATTTGAAAACTAAAAACAAAAACAAAAAATATCTTTAAGCTTTTTTAAG ATTTTAGTTTTGAAAAAAAAATTGTTTTGAACAACAACTTTTTAAAACAAGTTATGACAAACAAGTTTTTAAATTATTCA AATTTAAAAAATAAAAAACAATTTTTAAAAACTGCAAACAAACAATACCTTAGTAATTGTTGTGGCTCTTTTCTTCTTGT GAATTTCAGTGTTCTACAGTTATTGGTGTTGATTATGGTTTAATTATTGTTGGATGTAGTGAGTTGTACGGAAACAACAT TCAAGGAACCATTCCTCCAGAGCTTGGAAGCCTAAAGAGTCTAGTTAGCTTAGACTTGTACAAAAACAACTTATCAGGCG AGATCCCACCTTCACTTGGGTACTTGAACAATGTTATATTCATGTAAGTATATGGTGTTGCACTCTTTTTTTTTCGGTAC AGGTGTTACACTCGTTAAACATGAAAGTTGTGCTTTGCTTTTTCTTTTCTTACCTTCATTTGAATGACATACAAGGCTTT GATTGATTTAGGAGAAAACTCAAGGGCATTTGAACTACTAGCTACTGTTGTGTACTTTCATGTCATGTTTAATTGCACAT TTAGTCATCTAGTTTGCACTATGTATAAATTAAATCCCTCTAGTTTCTCTTGAGTTAATTAAGTCCCTATATTTTAAAAA CTAAGTCGGTCAGTCTGTCAATTTTAATATGCATAAAATCCTTAAATCTTCATCTATTTCAAATATTTTAGGGTTTATAA TGGATAATTCATAAAATGATTTCAAAAGTTTGAAAAAAATAACAGTTTTGTAAGATATAATATTTAGGTATAACGAGATA AACACAATGAATTTTTTTATGTTCAAATTAATGTTTTGTTTAGTAAGGGATGACTACAAGTTTTGGTTTTTTTTTTTCAC ACTTGAAAAAAATTGCAATGATTAGCTAGATTCAAATTTGAAAAAAAAAACAGAAAGTGAAAATTTAGAATTTTGAGTGA AATAAAAATGAAAGTGGGCTTAATTATAAGGGGTTTATTCTATTTTGAGAAATATTTTTAGTCAAAATCATAATCAACCA ATTAGAGGGACCAAAAATTCAATTAAACATTTGTATGTTTTCATTTGTACATTTTATATATGCTTCTTGTTAATATTTTA TTTGCAGAAGAATCAATAACAATCATCTAGCCGGTGGTCTCCCGGAGTCACTTGGTACTCTTCAAAAGCTTAGGATTCTG TAAGTCATATTATTGTCTTTATATGGTGGTGGTATTACAAAGATGTGTTATTTCACAAAGCCTAATTATTTTCTTTATCT TTCTTCAGGGATGTCTCCAACAATAACTTATCTGGCCCAATTTCGGCCATATTCCAAAATATTCCAATAACAAAGTATGT CTCATAAACATGTTGTATTTCCTATCTCTTTCTTTGTTGCTTCGTTTTTATTGTCTAGTACTATTTATGTTGGTTTTGCT TTATAGTCATTTTCTTCTTTCTTTGCATATGTTTTTAGGATCAAGGTCTTATGTCCCAATTTGGTGGATTATTCTGTCTC ACTAATAAAATTATATCGTGTAGGCACCGATATGTCAATTATAAATTTATAATCTTACAATGATGATTTTTAAATGACAT GATATAACTTAATTAGTAGGACTATGAATGAGACACTGCAAAGCATTTTGTTCCCTAATTTTAATGTCATTCTTTCTTAA AATTTTACCTTATAGGATCTAGAATATAAGATATATTTTTGCTATTGGGTGTCTTTGTGTTACTTACTGAATAAGAAATA TTTTGTTTTAATGTCGTAGCTTTACAAATAACCCTGGCTTGGGAGGTTCATAGTAGGTGGAGCTTGTCAGGACAGAGTGT TTTTGAATAAAGTGATGCTTTAGAATCTCAATCTGCGTCAAGTAATATAATAAATTAAAATGTATTAGCTCATAATGTAA TGGGCAATGGTGATTATCATCTTACGTATATGTAACTCAGAATCTCAATGGTTGAACTAAATCATTTTCCTTTACTTAGG TCTTATTTTGTGTGTGCAACTGAATATAGACTACATATTGAGTGATTTGTGTGGTTGGATTGACTTGCTTCAAGGAGAAT CATCCTTGAAAGCTATTAAATGATTTAAATATGTTAGATCTTAT
CDS sequence (LotjaGi1g1v0056100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCACCAACATTTTCCTTCTTCTTCTTATGCATTTCCCTAACCCTAATTCCCTTCTCCATTGCTAATGTCGAAAGTGA TGCTCTCTATGCCTTTAAGCAAAGCCTTTCTGACCCCAATAACGCTCTTGAGTCTTGGGATAATTCCCTTGTTGATCCTT GTACTTGGTTCCATATCACTTGTGATGGAGACCAAAGTGGTAGTGTTATTCGAGTGGATCTTTCAAATCAGAACCTAACT GGACATTTGGTACCTGACCTTGCAAATCTGCATGCTCTACAATACCTTGAGTTGTACGGAAACAACATTCAAGGAACCAT TCCTCCAGAGCTTGGAAGCCTAAAGAGTCTAGTTAGCTTAGACTTGTACAAAAACAACTTATCAGGCGAGATCCCACCTT CACTTGGGTACTTGAACAATGTTATATTCATAAGAATCAATAACAATCATCTAGCCGGTGGTCTCCCGGAGTCACTTGGT ACTCTTCAAAAGCTTAGGATTCTGGATGTCTCCAACAATAACTTATCTGGCCCAATTTCGGCCATATTCCAAAATATTCC AATAACAAACTTTACAAATAACCCTGGCTTGGGAGGTTCATAG
Protein sequence (LotjaGi1g1v0056100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAPTFSFFFLCISLTLIPFSIANVESDALYAFKQSLSDPNNALESWDNSLVDPCTWFHITCDGDQSGSVIRVDLSNQNLT GHLVPDLANLHALQYLELYGNNIQGTIPPELGSLKSLVSLDLYKNNLSGEIPPSLGYLNNVIFIRINNNHLAGGLPESLG TLQKLRILDVSNNNLSGPISAIFQNIPITNFTNNPGLGGS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 5 | 5 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 24 | 24 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 22 | 22 | - | – | |
| Phobius | 1 | 26 | 26 | - | – | |
| SignalP_EUK | 1 | 22 | 22 | - | – | |
| Phobius | 6 | 17 | 12 | - | – | |
| PANTHER | 14 | 183 | 170 | 1.4E-44 | – | |
| PANTHER | 14 | 183 | 170 | 1.4E-44 | – | |
| Phobius | 18 | 26 | 9 | - | – | |
| Gene3D | 18 | 200 | 183 | 3.2E-56 | ||
| Pfam | 23 | 62 | 40 | 3.5E-13 | ||
| SUPERFAMILY | 25 | 189 | 165 | 2.62E-38 | – | |
| Phobius | 27 | 200 | 174 | - | – | |
| Pfam | 164 | 185 | 22 | 0.031 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0056100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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