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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0068000 |
| Transcript ID | LotjaGi1g1v0068000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | E3 ubiquitin-protein ligase BRE1-like 2; TAIR: AT1G55250.5 histone mono-ubiquitination 2; Swiss-Prot: sp|Q9C895|BRE1B_ARATH E3 ubiquitin-protein ligase BRE1-like 2; TrEMBL-Plants: tr|A0A0B2SID2|A0A0B2SID2_GLYSO E3 ubiquitin-protein ligase BRE1-like 2; Found in the gene: LotjaGi1g1v0068000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:9411375..9422801) extracted from Lotus japonicus Gifu genome v1.2.
TATTCAAAAGTTGAGATACTTGTCATTGCACTTGGCAGCCAGAGTAAAACAGTAGAAGTGGTTTTCTTCTTCTTCCTCAA GAGCTGCAAGTTTTCATTTTGATTCTCGAGAATCGGTGTTCCTAGTACTGTGTCCAGTTTGGTTGAAAGTTTCAGAATTG CAATGGAAAACTCAGAGAACGATGAACCTGACAAGAAGAGGCCTCATCTCACCTCTGTTTCTTCCCGCTCGGCCATGAAC AAAACTGTAACCCCTTTTTCCTCTATCTCTCTTTCTCTCTCTAACTATGGTGGTTTTGCTTCTGCCATTAATGTTTGATG TTCTGTTGATATTTTTTTATTCTGAATTTTGATGCTTGCATTGAATTGTATGTGTGATTGAATTCATAGAGCTGTTTGAT CATCTGGGCACCTTATGATTAGGCTCTTTTAGTGAAGAGGGAGTCAAATTGTGGATAAAGTTTTGTTCTTTAAGACATGG GGTGGCAATTTGATTGTGCTTTGTGCTCACTCACTACTTTGTAGGGCTGGGAAGAGTAGCAAGGATGGGTTTGATGTCTT GAGATTCTTTGTATTATGTGATGTTTGATTGGATAGGGGAAGATTGGGGGTTCAAATTTCTTGTTGTGCTTGATCTTGCT GAAAGGGGTGTTTTCATGTTATTGATATTGAGAATCCTTCATTTTTTCAAAATAATGTTGTATATTTACTAAAAAAATAG TGTGTATGGGCAAGGGTTTTTAAGGGCTTTGATGGGTTTAGCAAGTGTTTTAGAGGTGAAAAAAGCTGTTTGGTTTATTG TTTATCATCAGAACACATTCTATCTGTGTGGCAACAAGATCTTTTTTCATCATTGATTGTTTATGATTTCTACTAGCATA ATGAGGAATGATTATGCTCCCTTCAGGCTGATGCAGGTGTCTTACAGTTCCAGAATCAGCAGCTTGTTCAACAGATAGAT GTTCAAAAACATGCTTTGCAGGAACTTGAAGACAAAATTAGGAAATTAAAAGAAAGGCAAACTTCTTATGATGACTTGTT AATTAAAACGAACCAACAATGGAATCAGGTTATTCTTTATCATCATGCTCTGGTTTCCGTCATCCCTACTCTCTATTAAG CTTTTTATTTCCCTCTTTTGAAAGTAACACTACCATAAGAGGGGCAGGCACTGTTTGTCATATTCTTGTAGGATGTGCAC ATTTTCTTACTTTCTTATTTGTTTTTCTAGTTGGTTGATGATATGACTCTTCTGGGGATACGAGCTGGGAGAGGCAAAGA GACATTGCAAACTTTGCCGCACCTTGATAATCATCAAGGTACTTCCATTGTATATCTAGTTTCGTCAAGCTCTTTCTTGC AGTATTAGGAAATTCAAAAGACTGACTCGACTTAATATTAGGTCCACTTCCTTCGTGTCCTGCGGAGGATATATTTCTAT GTAGATTAATCCAGAAAGATTCTATTGAAGGAAGCAGTAATAGTGAGATAATGAATTATGTTGAGGAAGCCCTTGCTTTG CGTCGGGCATCTACATGGGAGTTGTTGAAACTCCTTCAGGATTCCATTAATAATCAGATGGAAAGAATTGACATCATAGC TCAGGCTTTACCTGGAGATTTATTTTCAGAAGGTAAAATACATTTGATTTGATATCCAGTTGTTGAGTTTAATAGTTTTC GTTAATGATTGATTTGATATTTTTCTAGCACATATCATTGATGTATGATTGTTTAAGGAAAATTGCATATATGATCTGTT GATTGGTACTCATTCTTGGGTTTGCAGATGCTATCAAGCAAATGTCTATGATTGATGATATGACAAAAGAGGAGGCACAT AATTTACGTGAAGTGATTGATACTCTCAATGAGAAACATAAAGAGTACAGTGCTAGTATTCAAAATTATATTAAAGAGGG CGTACAGGATCAATCTGACATCAAACGCTTTGCAGGTCTTTGAAATGTTTCTTTCTCTTTTTTGTTTTAACTAGTTATTT TTAAGTTTAGAATAACAAAGTGTGATTTTTAATGATCTTTATTATCATATACTATGGTTTTTAAATTGTTAAAGGCGTGG TTAAATAATGGCGTGTTTTATTGATGTATTTTAGTTGTAAGTGGCAGTATTATATGATCCTCGAAATATTAATAGCGATG ATTTCTGGTCATTGCATGACATAGTTAGGTCCTAATGAACAGTGATTTTTGGACTATTTCGATGTAAAGAAGCATAAGTC AAGGATCTAATTCATGAAATAATATTTTGAGAAACAAATTGTCTGGTTCGAAAATGATTCAAATGCCAAATGAGGTAATA GGTCTGAAATGATGTGTCCCAAATACTCTAAATTGGTCTGCCTGAAACAGCACCTTCAATGCCTCATTCATGAGGGCCTG AAATGTGGAAGGTGCAACTGTCAAGCCAAATGGTTTGACTAAAGGCTCATAGTGTCCTATATGAGTCCTGATAGCTGTCT TCTCAATGTATTACCCCAATTTTAGGTCCAGTTTAGACAAAATAATTGATCCTCTAATTCATCCCCAACTCTATAATCAC AGTTATTGGGAATTTATTAGGCACTTCTTTTTTATTCAATGCTATATAGTAAATCTTCACCTACCACCTTTTTTCATACT AAAACAACAGGAATAGGGTAGGGGCTTATATTTTGGCCTAATAATGCTAGCAGTCAGCATCTCATTCACCAAATTATCTA TCTCAGGATTTTGATAGTGAGGGTACCGTAAGATCTAATATTGGGAAGTGGGGTACAATTTTCAGCTGCACTGATTCATG TTGGTGATGCTATCTTGGTTGGCAATAGTGCAATATCCTGTCCGAGTCACATTCTTCAAGAACTCTCTCCACCAGTCCTT TGGGTTCAAGGACTTGGGAGCTCTCAAGTAATTGTTGGGCCTGGAAGTGGCACAATCAGACCATGGAATAGCACTATGCC AAAGGAAATTTTGTTTGGGACTTCTCATTGGTGCTGGCCTCTCTGGTTGTAAGCCAGCCTCCACCCCTTCGGATCCAGCT GCCCCTTTAGAGTGTCTTTGTAATGAATATTTCAGAATGTATTTGATTTATAATTTTAAATGAAGTTTTTGTTTGGAAAG TTATGAAGTAGTGATAAAATTGATTTAGAAATCCTTTTGATTTACCCCTATTAGATAAGTCATTAAACCTATTCTAAGTT CGGTTATAAAATAAATTACTAATATAAAATCAATTTAATGTGTTCCAAACATGAAATTCGTTTTTTATTTGAATATCATT TTTAATAATGAGATCCTAACCAAAAAATTTATTTATGGACCGAATGAAATTAATTCCAATTTTGATTCATTTGGAATGAA ATGTAGGTAAGCAGGCTTTTGCACAATGTAAATTCTTTTTATGATATTTACCGGACAGAAAGCAGTAGTGTGCTTTTTTC AGGTGATGAAAGGGTAGTTATAAGAAAGGACAAGCCAATGTATGTGCACTCTTTAAGGCTGATTTATATAAATATCATGA AAGCTATTGTGAAAGTCTGATATAATTCAAAAGTAATAATTATCTCAGTGGAGGATGACCGTTCTGTGGTCTCGTGCTTA GGAGGGAAATAATTGTCATTCTGCTACTGAATATTTTAGTAATAAAATAAAATAAAAAGGAGTTATAGGGATTAAAACTG GTCTGGTTAGAATTAATTAGGAATAGGTCTTCTGACCAGAAGTAATGTCCTTAGACTTATGTAGATTTTCTTATATAATT GTGGGTATCATATTGGTTGAGGCTTTTCATAATTGTCACTTAAGAGTATCTTCTCTTCATACTGAAAGGCGAGCTTGATG AGATTGCGGCTGAACTTGAAGAAAGCAGAAGAAAACTAGTCAGTCTGAAAATGCAAAAGGATGCAGCGATCGGGATCAAT TCTCCGAATGCAGATGCAGTGAATGGAAACTTGTCTCCTGAAAAGCCTGCAGGCAGGACTATGAGTTTGCATGAGTTGAA GGATTCAATTGAGGAAGCGAAGGTTTTTATTGTGTAATTTTCTTTCTTTCTATCATTCCTTTGTCCTTTTTGTCTACCTA ATGAAGATATATGCACGCATGATGTCATAGATAGTCGATGCTGATCGTGCCTCTGAGCTTCAAGATGCTCAGGAAGACAA TCAAACCTTGACAAAGCAATTACAAGATCTTCAGGTTTGTAAGTTTCGATTATGTATGATGGTTTTGTCATATTTTTTTG AACAATTGAGATGCATTCACTACAGAGTTCCTTGTAAAAGTTGCTTTTCATGCTTGTTTATTTCCAGAATGAACTGAATG ATGATAAGTATGTACGCTCTTCCCGAATATACTCTTTGGCAAATGATCAACTTCAACATTGGATGGCTGAATTGAACCGA TATAAAATGTTAACGGAGTCTCTGCAGGTTAACAAAAATTTCCTTTTTTCTATGATGTATAACAGTTTGATCATAATTCA ATATTGTTTTTTTTTTGTTTATCTTTTTACATACTTTTAAATGGAATTTCAGGCTGGCCGTGCCCATATCACAAAAAGGG AGAAGGAACTGAATTTGAAATTAGAGTCTGCTGATACTGCAAGGCATATGCTTGACAAATCTGACAATAGGATTGATGAG CTAGAGCATCAGTTGCAGAAGTGTATTATTGAGAAGAATGATCTTGAAATTGAGATGGAAGAGGCTATCCAGGATACTGG TCAGTATATCGCTTTTCTGTGTTTAGATTTGCAGTTTATATGATTGGATCTCTCAGTTTCATCTAATATTACATGTTTCA GGGAGAAAAGATATCAAATCTGAGTTTCATGTGATGGCCTCAGCTTTATCTAAAGAAATGGGAATGATGGAAGCTCAGTT GAAACGATGGAAGGATGCAGCTCATGAGGCTGTGTCATTACGTGAGAAAGCACATTCTCTACGAGCATTGTTGAGTGGGA AGGTAATTCTCACAAATTGATTTTGTGCCCTTTCATTTTCTTGCCAACCTACTTTGTCATAGGTCTTTAGTTGAAACTTA TCTAGTTGGTTTGAGCCTGTGATGTTCTCTACATGGTTAATTCTTCAGAGAATTAGGATTCAAGTAAGTGTCAGTTTAAG CCATCTTAACTCTATAGTCAAATGCCAAGAAAAGATTCACTCAAAAGCTGATCTGTTGGTAAAAAGGCACAAGAACTGTT TTGACTTAAAGTGTGGACAAAGTAAAGTGCCATGTTATTGAATCATAAAAATATGCTGTGAAGTTGGTAGGTATGCATTG TAACTCCAAATTTCAATATCTTTGTTTAATGAATCTGACATAGATATGCATGTTAAAGTTATAGATCGTGAACAACAAAA GTTCAATTTGGTATAAGCTAACAAAAGTTTCCAATTGTGTGGTAATAAATTAATGCTTATTGTATATGAAAAAATATGGT TAGTATATGGTAAAATGTGGTTGTGAACCAACCTATAATTTTTTTTTTGAAATAACTTGTTGGATAGAATGACTTGAGAA ACCGTGTTGGTTACAACATACAGCAAGAGCTTATAAGCAGGTTCTTTCCCTTGAATACACACAGTACATGCTTTTTTAGC ATTAAGATCTATTAATTCCTTTGTGTTGAAGCAGACTGCCGAAATTAAGAGCCATGCAAGCAAATGTGTTGAACAGGATT TGGAAATCAAGTCGTTAAAAACATTGGTAAGTTTTCCCTTGGCTTTATCTTTGTGTTTCCTTTATCTGTGTGTATTTTCT TCTTCAATGCATCTATTGTATAACTGTAAGTCAGTAATACTTCTCAATTTCTTCATTTCTTCAATAAGCCACTTATATAT TACCTTCTGAATTTGGAGGATGCTTGCTTCATTTTGTGTTTCACAAGATTCTCAAACATTATTTGCATTGTGATTTTAGA GGACTTCTAGATTGTCTATAACTAATCTTAAAACATCTAATTATGATGTTCTGTTACAGATTGAGAAGTTACAGAAGGAG AATAAGGAGTTAGAAGTTGTTCTGGATATGTATGGCGAAGAAAATTACGATAAAAGGTATGCTGATCTAAGGTTGTTAAG TGGTGGCTGTGTTTAGGATGATAGCACACATTTCATGGGTGAAGTAATGGAAACACCTTCTAGTCGTTCGTCTTTGGTTT ACCCCTTGCTCATTTTAATATTGTCCAACTTCAAGGTTTCGATGTTCCTTTTACATTCATTTCACTTTGATTATAAGAAG CATCAAATTTTGTCCTCAAATGTTCCTAACAAATTTTCTTCAAAATCTTATTTACATGTAGTTTTGTTAACTGACTAGGA AATCTGTTTTGCATTCAAAACACAATTTTGTTCTCCCATCTAGCTGGAATTTTCATTCATGATATGCTATGTAATTTGGA TTTCAGATTGGCAGAAGTTAGAGAATCTGAAAGTAAAGCTTGCTCTCAAGCTGAAATGCTGAAAAATGCATTAGATGAAC ATAGTTTAGAATTAAGGGTAAAAGCTGCTAAAGAAGCTGAAGCCGCTTGTGAACAAAGGCTTTCTGCTGCAGAAGCTGAA TTGGAGGACTTAAGGGCCAAAGTGGATGCATCTGAGAGGTTTGTGTTTATGTATACTTCTACATTGGTTATGGATTTGCT GCATTGACAAACTGGTGAAGTGTCCATTGTTTTTCCTTCCTTTTAGACCTATCTTCCCAAGGGTTTCCCCTTCACAAAGG ATCTCTCCTTTCACAACAAAAGCAATTGCATTACAGAATGAATGTCTCTGTTCTGAATTCCCCCTACTTATCTACTAATC TCTTCTAAATATCTAAGGAATCTAACTAACTAGTTGATTATCTACTATCCTTATCATGTCCTAGCAATACATGCTCACAA ATACATAGGCCCACTTTATTAGAATGGTGAGTGGCAAACACCGAACTTTTGATCACTTAGTTAAAAAGTTCTAATACCAT GTCTTGAACCAATATTTCTACAATTTAAGTTGAGGTGATGCTATATAAATGGTTCTAGACTTGCGTATTTAACATGCACA GTCTTAAAAATCAGAGATTTTTGAAACATGTGTGTGGTCTAAATAACACGAATGTCTGTATCAGCTGTTTGATACTGCAA TTTTAGCACACTTGCTAATATTTCTTTGTCAGATAGAACTGATATGTTTTTTTTCTTTTTAGTAGCCTTCTTTTTTTTGT ACCTATTGTGTTCATATGAATTGAATAAAAAATGATTGTACAATATGTCATTGTTAATGAAACAATTAACACATGCCTTC TCCATTTTTATCCGCCTGTATTCAGAGATATCTTGGAGATGACTGAGGCTATTAAAGTTAAAGATGCTGAGGCAGAGGCA TATATATCTGAAATTGAGGTTTCCTATCTAACTTGACTTTTCTTCCCCCCTCGTCCTAGGTTAACAGCAACAAGTTACTT ATGGTTATGCTCTAACTCTCTTTTGCTCTAACATACTTAACTGCAGACTATTGGTCAAGCATATGAAGATATGCAGACAC AGAACCAACATCTGTTGCAGCAGGTGACTGAGAGGGATGACTATAATATAAAGGTATGCCTTATTGTTAATCTCTAGTAA ATGCCACCTTGCCATGATCTTCACCGTTTTTCCGTGCACAAAATTAATGCTGGTCGATAGTGAAAGTTTTAAGCTATTGC TATGAAATGCCTAGGTTATAATTTAGGATTTTGCTAGCCTGGTTGATGAAAAAATAAAGCATCTACTTTGTAACTAATAA AACATTAACTTATGCATTGATTTCTTTGATAAGAAGTGTATTTAAAATTATATGTCATTATTTTGATTTTGAAAATACTT GTTTATTTGTTACATGTAATGAAAAACCATTTCCTAAGTATCAAACTTTTGTTAGAAATATAACCATTCATGTGTCCCTT ACCTAAAAGCTTAAGCTTTTGGGATAGTTGATTCATGACATGGTATTAGATCCTTTGTGGAGTTCAATCCTTGCCGCCCC CAATTCTTCTAATAAAAAAAAGTTGGATTTCAGCGCATGACAGGTGGGCTTGTTCATTGTTCACGCTTCAAGCCTAACTG GGCTCTTGCGTGAGGGTGCGCGTTAGAGATATAAACCATTCATGTGCCCCTTGCCCAAAAGCCTCAGCTTTTGGGCTTTT GGGATAGTTGGTTCATGATACTACTATAAATAATAATTGGTCTTGTTAGAATTTAATATTATGAAAAGTTTTAGAGAACT GTTGGGCCACATCTCCCAGAATCAACTCTGGACCTTCCTAGCTGATAATTTATTTTGGCAACTACCTCAATATATCAGTT TTCACGGTGGATCTTGGCGGTTAAAATCTTGTTCTAAACAGGAACTGTATGCATAGAAAGTGGTGCTATTTCTGAAAACT GGTGTGTGTATGTGTTCTGTTCTTTACCCAAATAATTCCATTTTTGGTTAGAAAGACTTTTTTTCTTATCCTATTTGTAA ACTTAATGCAGCTTGTATCAGAAACTGTGAAGACAAAACAGGTGCATAGCACTTTACTGTCTGAGAAGCAGGTCTTAGCA AAGCAACTTCAACAAATTAATTCTAAGATAGAAAATGCAAAGATGAGAATTACACACGGTGAACAGCAGGTCTGACATCC TTTGCTTCCTGGTCTCCTACTAATATATTTTTGTTTTGATATTCTGCTAACCAACTTCGCTTCTGCTCACTGTTGTAAAC TATAATCTGAACCCAGCAGTTGAAAGGTATTCTATCAGAAGCCGCTAAATGTACTCAAGATGAAAAACACCTTGCAGTCT CCCTGGAATTCGCAAAGTGGGAATTGGCTGATGCTGAGAAGGAGTTTAAGTGGCTCAAGTCTGCTGCTTCATCTTCAGAG AAAGAATATGATCAAATTCAGAAAGATGCCAAAGCTTTTGAAATGGAGTTGGATCGTGAAAGGTATATTTCTTTCTAAAG AGTTTGGTACAAATGGATAAAAAGGGTAGTCATGGAGCTTAAGAATCTTGTTATATGGTTTGATTCAGATGCAGTCTTAG TTGACTGTGGTTGCTTAGTTTGGCTGAAATCATTTATGCTTAATAGTTTTATGAAAAACTCAAAAAGTTTATTACAAAAT TAAAATAAATAGTTTGGCTAAACATGTAGATTTAAGATGATATACATTTTTGCAAAAACAAAAAGTTTATCTTTTAAGAC CAGTGTATCTCCCTACTCATCTAGATGAAATTCAAGTGCTATGATACGAGTGTGCACTATCTCTTACCGCATGTTTGGAA ACCAATAAAATATCACATTTAAGTAGAATCTATAGTCAAATAGATGTTAAAATGAAAAGCTACTGTGTAGCTGCTAGGTT CTAGACTTCTAGCAATCAGGAATCGATTTGTGATCAATTTGATGGATATCTAAACATGAAACTATGCTGTGTTTGGATTC CAGGAAGTTTGGTGCAAAATTTGCACTGCATAAAACCTGTAAATTTTATGCATTACATAGTTGACATTGGAAAAATTACT ATCTTTGTATGAAATGCACTCTCAAGTGGCTCAACTCATTCTGATCTTATGATGTTATGCAGGAGTTCACGGAAGAAACT TCAAGAAGAATTGAGGGAATTGAATAACCAAATTGCTGAGCTGAGTTCTGAAACTGGAGAAGCTGCAATACAAAAACTCG AAGAAGAAATAAGAGCTTGCAAGAACATGATCAAGTGCACTGTCTGTTCTGATCGTCCAAAGGAGGTAAAAACAGACCAA CTTATCCCACTGTGGTTCTTGCTTACGTTGTAGTTAAATTAAATTGGTTGTTTCAAGTATAAAACTCGCCTTGACCCAGC TGGTCCGATGGTTGAATCTGCCGGTAACTGGTCTGAGTGACATGTTAAACCAGTTAAGTTTAAGATTTGATGTGACTTGG TTCGGCCCGGCCAGTTTTCACAAAAAACCGAGATGACTCGGCTGATTTGTATATTAATAAAAAAAATACATATAATGAAA GAAAACAAAAAGTCTTAATAACACTGAAGACCACCTAAAATAAAATCTATTTAACAGCAACACCTAAGAGTTTGATCTTT ATTTGGCGCAGGTTGTGATTGTGAAGTGCTATCATCTGTTCTGCAATCCATGCATACAAAGAAATCTTGAGCTACGTCAC CGTAAATGTCCTGCCTGCGGAGCAGCATTTGGACAGAGTGATGTTCGCTTTGTCAAAATATGAGACTGATGTTAAATTTC TAGTTGTTAGACGTTTGATTATTGTTTTGGGTCCTTGGACAGTGCTGTTGGCTTTTATTACCTGCATCATAGTTTCAAAT AAGCATTCTAATAAGGCTTAGAGGAACTTATTTGATCTTATCTTATAGTATAATCACTTATTCAAATAATTGAAATTTTT TGTGGAAATAGTTTATGATTATTATGACTCAAGGCTGAGAAGCCTATATTTATAGCTAGGGAAGTCATTAGTTACACTCC AAGAGTTCTCACACTAGTAAATCCCCCCTCATGCATTATCTCGTATAGCTCGAATACACACCACGCGAAGACTTTTCTTC TCCATAGCATTCCACAACATTTCCATAGACATAGTCATATGCTTTTTCCAAGTCAATAAAAATCATATGCAAGTACGTGA ATTTATCCCAAAATTCTAAAGAATAGAAAAACGCTAATGATGAACACACAGCCTCTCTATGTGCTCTCAAATTCAGAAAT TGAAGATTGTGAGCATGTTAATGTGTTAGAGCATGGGAAAACCTTGTATAGCCGCAAGTCCACTGTTGGTAATCTATTAC CATACAATGTTGTCCCCTTCATAAAAGCACATGAAAATCATTTTAAAAACATTTTTCCTAAAGTTTCTAAGTCTAAATGA AAACATTTAAGTTCAATTCTCAATTGATTTAAACACATTTTAAAGAGAGCATTGACAACTTAAGAACTAAGTATGGAGTC ATCCCTTGTGAGATCTAACTAAGAAAGCAGTAAAAGTATTACATAATCTTTAAAGTCTTCAAGCTACTCATTCTTTTCTT CTTTTTGTATAGTGTTGTTGTCTTCATCAAAACTCTGCCAAGTTAGAAGCATACATTCCTTGCACTTCCTGGACGCGTCT GCTACTAGTGTAATTAAGCTCAACTTTGATGCTTCGATTCTCTTCAAACATGGATGTGTTCCGCCTTGTAACTCAGGACC ATTTGGGGGATGTTCTAGTTGCTACAACTGCTTCTCTAGACCAGGTTTTTTGTCACCAGTGGTAGTGGATGCTCTTTTGC TTTCGTTGGGCAATTTCTTTGGCTACTGATTTGTGTTTCCATTCCGTTTGTTTTGAAACATACCATCACTAACTGACTGT TTGGTATTTAAGGGAATGCCTCAGATGACACCTCTTACCTTAGTATCATTGTTAATGATTGTCGTGG
CDS sequence (LotjaGi1g1v0068000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAAACTCAGAGAACGATGAACCTGACAAGAAGAGGCCTCATCTCACCTCTGTTTCTTCCCGCTCGGCCATGAACAA AACTGCTGATGCAGGTGTCTTACAGTTCCAGAATCAGCAGCTTGTTCAACAGATAGATGTTCAAAAACATGCTTTGCAGG AACTTGAAGACAAAATTAGGAAATTAAAAGAAAGGCAAACTTCTTATGATGACTTGTTAATTAAAACGAACCAACAATGG AATCAGTTGGTTGATGATATGACTCTTCTGGGGATACGAGCTGGGAGAGGCAAAGAGACATTGCAAACTTTGCCGCACCT TGATAATCATCAAGGTCCACTTCCTTCGTGTCCTGCGGAGGATATATTTCTATGTAGATTAATCCAGAAAGATTCTATTG AAGGAAGCAGTAATAGTGAGATAATGAATTATGTTGAGGAAGCCCTTGCTTTGCGTCGGGCATCTACATGGGAGTTGTTG AAACTCCTTCAGGATTCCATTAATAATCAGATGGAAAGAATTGACATCATAGCTCAGGCTTTACCTGGAGATTTATTTTC AGAAGATGCTATCAAGCAAATGTCTATGATTGATGATATGACAAAAGAGGAGGCACATAATTTACGTGAAGTGATTGATA CTCTCAATGAGAAACATAAAGAGTACAGTGCTAGTATTCAAAATTATATTAAAGAGGGCGTACAGGATCAATCTGACATC AAACGCTTTGCAGGCGAGCTTGATGAGATTGCGGCTGAACTTGAAGAAAGCAGAAGAAAACTAGTCAGTCTGAAAATGCA AAAGGATGCAGCGATCGGGATCAATTCTCCGAATGCAGATGCAGTGAATGGAAACTTGTCTCCTGAAAAGCCTGCAGGCA GGACTATGAGTTTGCATGAGTTGAAGGATTCAATTGAGGAAGCGAAGATAGTCGATGCTGATCGTGCCTCTGAGCTTCAA GATGCTCAGGAAGACAATCAAACCTTGACAAAGCAATTACAAGATCTTCAGAATGAACTGAATGATGATAAGTATGTACG CTCTTCCCGAATATACTCTTTGGCAAATGATCAACTTCAACATTGGATGGCTGAATTGAACCGATATAAAATGTTAACGG AGTCTCTGCAGGCTGGCCGTGCCCATATCACAAAAAGGGAGAAGGAACTGAATTTGAAATTAGAGTCTGCTGATACTGCA AGGCATATGCTTGACAAATCTGACAATAGGATTGATGAGCTAGAGCATCAGTTGCAGAAGTGTATTATTGAGAAGAATGA TCTTGAAATTGAGATGGAAGAGGCTATCCAGGATACTGGGAGAAAAGATATCAAATCTGAGTTTCATGTGATGGCCTCAG CTTTATCTAAAGAAATGGGAATGATGGAAGCTCAGTTGAAACGATGGAAGGATGCAGCTCATGAGGCTGTGTCATTACGT GAGAAAGCACATTCTCTACGAGCATTGTTGAGTGGGAAGACTGCCGAAATTAAGAGCCATGCAAGCAAATGTGTTGAACA GGATTTGGAAATCAAGTCGTTAAAAACATTGATTGAGAAGTTACAGAAGGAGAATAAGGAGTTAGAAGTTGTTCTGGATA TGTATGGCGAAGAAAATTACGATAAAAGATTGGCAGAAGTTAGAGAATCTGAAAGTAAAGCTTGCTCTCAAGCTGAAATG CTGAAAAATGCATTAGATGAACATAGTTTAGAATTAAGGGTAAAAGCTGCTAAAGAAGCTGAAGCCGCTTGTGAACAAAG GCTTTCTGCTGCAGAAGCTGAATTGGAGGACTTAAGGGCCAAAGTGGATGCATCTGAGAGAGATATCTTGGAGATGACTG AGGCTATTAAAGTTAAAGATGCTGAGGCAGAGGCATATATATCTGAAATTGAGACTATTGGTCAAGCATATGAAGATATG CAGACACAGAACCAACATCTGTTGCAGCAGGTGACTGAGAGGGATGACTATAATATAAAGCTTGTATCAGAAACTGTGAA GACAAAACAGGTGCATAGCACTTTACTGTCTGAGAAGCAGGTCTTAGCAAAGCAACTTCAACAAATTAATTCTAAGATAG AAAATGCAAAGATGAGAATTACACACGGTGAACAGCAGTTGAAAGGTATTCTATCAGAAGCCGCTAAATGTACTCAAGAT GAAAAACACCTTGCAGTCTCCCTGGAATTCGCAAAGTGGGAATTGGCTGATGCTGAGAAGGAGTTTAAGTGGCTCAAGTC TGCTGCTTCATCTTCAGAGAAAGAATATGATCAAATTCAGAAAGATGCCAAAGCTTTTGAAATGGAGTTGGATCGTGAAA GGAGTTCACGGAAGAAACTTCAAGAAGAATTGAGGGAATTGAATAACCAAATTGCTGAGCTGAGTTCTGAAACTGGAGAA GCTGCAATACAAAAACTCGAAGAAGAAATAAGAGCTTGCAAGAACATGATCAAGTGCACTGTCTGTTCTGATCGTCCAAA GGAGGTTGTGATTGTGAAGTGCTATCATCTGTTCTGCAATCCATGCATACAAAGAAATCTTGAGCTACGTCACCGTAAAT GTCCTGCCTGCGGAGCAGCATTTGGACAGAGTGATGTTCGCTTTGTCAAAATATGA
Protein sequence (LotjaGi1g1v0068000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MENSENDEPDKKRPHLTSVSSRSAMNKTADAGVLQFQNQQLVQQIDVQKHALQELEDKIRKLKERQTSYDDLLIKTNQQW NQLVDDMTLLGIRAGRGKETLQTLPHLDNHQGPLPSCPAEDIFLCRLIQKDSIEGSSNSEIMNYVEEALALRRASTWELL KLLQDSINNQMERIDIIAQALPGDLFSEDAIKQMSMIDDMTKEEAHNLREVIDTLNEKHKEYSASIQNYIKEGVQDQSDI KRFAGELDEIAAELEESRRKLVSLKMQKDAAIGINSPNADAVNGNLSPEKPAGRTMSLHELKDSIEEAKIVDADRASELQ DAQEDNQTLTKQLQDLQNELNDDKYVRSSRIYSLANDQLQHWMAELNRYKMLTESLQAGRAHITKREKELNLKLESADTA RHMLDKSDNRIDELEHQLQKCIIEKNDLEIEMEEAIQDTGRKDIKSEFHVMASALSKEMGMMEAQLKRWKDAAHEAVSLR EKAHSLRALLSGKTAEIKSHASKCVEQDLEIKSLKTLIEKLQKENKELEVVLDMYGEENYDKRLAEVRESESKACSQAEM LKNALDEHSLELRVKAAKEAEAACEQRLSAAEAELEDLRAKVDASERDILEMTEAIKVKDAEAEAYISEIETIGQAYEDM QTQNQHLLQQVTERDDYNIKLVSETVKTKQVHSTLLSEKQVLAKQLQQINSKIENAKMRITHGEQQLKGILSEAAKCTQD EKHLAVSLEFAKWELADAEKEFKWLKSAASSSEKEYDQIQKDAKAFEMELDRERSSRKKLQEELRELNNQIAELSSETGE AAIQKLEEEIRACKNMIKCTVCSDRPKEVVIVKCYHLFCNPCIQRNLELRHRKCPACGAAFGQSDVRFVKI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 17 | 17 | - | – | |
| MobiDBLite | 1 | 26 | 26 | - | – | |
| PANTHER | 6 | 871 | 866 | 1.1E-239 | ||
| PANTHER | 6 | 871 | 866 | 1.1E-239 | – | |
| Coils | 38 | 72 | 35 | - | – | |
| Coils | 205 | 232 | 28 | - | – | |
| Coils | 240 | 267 | 28 | - | – | |
| Coils | 319 | 346 | 28 | - | – | |
| Coils | 397 | 438 | 42 | - | – | |
| Coils | 504 | 538 | 35 | - | – | |
| Coils | 574 | 615 | 42 | - | – | |
| Coils | 679 | 706 | 28 | - | – | |
| Coils | 749 | 816 | 68 | - | – | |
| Gene3D | 800 | 871 | 72 | 4.2E-16 | ||
| CDD | 817 | 858 | 42 | 1.65911E-20 | – | |
| SUPERFAMILY | 818 | 862 | 45 | 6.48E-12 | – | |
| Pfam | 818 | 859 | 42 | 1.3E-8 | – | |
| ProSiteProfiles | 819 | 857 | 39 | 11.102 | ||
| SMART | 819 | 857 | 39 | 2.9E-5 | ||
| ProSitePatterns | 834 | 843 | 10 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Ubiquitin-protein transferase activity | Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages. | ||
| Biological process | Histone monoubiquitination | The modification of histones by addition of a single ubiquitin group. |
Expression pattern of LotjaGi1g1v0068000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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