Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0077600 |
| Transcript ID | LotjaGi1g1v0077600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Phosphoinositide phospholipase C; TAIR: AT3G08510.1 phospholipase C 2; Swiss-Prot: sp|Q39033|PLCD2_ARATH Phosphoinositide phospholipase C 2; TrEMBL-Plants: tr|Q43443|Q43443_SOYBN Phosphoinositide phospholipase C; Found in the gene: LotjaGi1g1v0077600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:11210093..11214949) extracted from Lotus japonicus Gifu genome v1.2.
GATTATTCTATATTTTTGTTTTTATTGCTTTATATATATATATATAGTAACTTTTTAGATATGCTTACATAGATCCAGAA ATACAGATGTAATAAAAGTGACTGTAATAAATATTTTACAGAAAGCAATTGAAGAACAGCAGACACCAAATTTATACAAG AATCTCTCTCATAATCATAACTCATACAACATGTTTATGCAACAATTGGAATTCAGATCATTGCATAGCCATAGACTATA GAGGTTCCATTGCTGGACCCACCTTGACCTTTCACACTCTGTTGTTGTAGACAAAAACAAACTCTGTGATCTCCAACATC ACCACCACCATCATCATCAACATGTCGAAACAGACTTACAGTGTCTGCTTCTGCTGGCGGCGGCGGTTCAAGCTAGCTCT GGCGGAGGCGCCACCGGAGATCAAGACCCTTTTCGATCAGTACTCAGAGAATGAGCTCATGACAGCTTCACAGCTTCAAA GATTCTTAGTTGAGGTGCAGAGGCAAGAGAAGGCCACTGAAGAGGAAGCACAAGCCATCATCGATAGCTTCAAGCATTTC CATCGAAAGGGTCATGGTCTCAACCTTGAAACTTTCTTCAAGTACCTTTTTGGTGACAGCAACCCTCCTCTTGTTCCTTC TCTTGGGGTAAAAAGAAAATGGAATTTTTAGCTTTTTGCATTTTTTTTCTATCTGAATCGTTGACCCTTGTAGTTTTTTC ACTTGTTTGAGTCAATGAGATTCTGGATTTGGCATTTCCATTTGGGGTGTTCTTCTTTTTGGAAAGGATTTTTTTACCAG ATTGATTATCACTTTACCATTTTGCCTTTCATTTTCTAACCATTTTTGTTTTGTATATGCACTCATGTGACTTTTAAATT GTTCTGAAGTTTTAGCTTTTAGCATTATGCATGAATTTGGAATAGTTGATAATGTCAATCTGAACTGAATTTACAGTAAT TCATCTTTGAATTTATTCTGAAGCCAAAGTCAATTATGGAGAGAAGCTTCTTTGAGTAACTTCTCTGTTTCAAAATTGAT TCTCATGAAATAGAAGCTGATCCAAACCCTGTACTTTTGGACTTACCCAAAAAAGGCCTTTACCTTTAGTAACTTACTGC ATTTTGTTTGTGCCCATTGAGAATTAGGATTAGGACTTTAACTGAAGTCACACATTCCTTCTTTTGGAAAAGACATGGCA TTGCAGGGAATGTGATTTTTTTTGTTTCCTGTTTCATCATATACCATATGGCATCACTTTGTCTTCTTGGGATGCCATTA CTTTTTAGTTTCTATGCTTATATTGCTGTAGATTGTCTTTACACTTTGCACTGATCAGTGTGATTTGTGAAATTATTTCT TCTATTCCAGGTGCACCATGATATGACTTTACCCATGTCTCATTACTTCATATATACTGGCCATAATTCCTATCTAACTG GGAATCAGCTGAGCAGCGACTGCAGTGACATCCCCATCGTAAACGCACTGAAGAGAGGTGTGAGGGTGATTGAATTGGAC TTATGGCCTAATGCATCAAAGGATAATGTCGATGTTCTTCACGGAAGGTAAGTTCACTGGTTGAATGATATGTTAACTTC TCCCTGATCTCCCTTTTCTACTTCCATTTTCATTAGTGATCAGGAAGAAGTGAAAGAAATAAGTTTAACAGTTTCAAAAA TTGTTGTTTATTTCAGTTATAATTTTCTGCTCTGATTCTCTGCCCTGAGTGCAAGCATGAATGGTCTTAAGAAAACAATT TTGCAAAGGAAATAGTTCTTTAACAATTCTCTGTATTTTCTTTGATATTATCTTGCCAAGATGAGTTGGAGTAAAAAGGT GGCAAATAGTAGTAGTTTCTTTGCAATCAGGCATAGCAGGCTGAATCAAGAAATTGCTTTCTAGTAAAAAGGTAGCAAAT TGTAGTAGTTTCTTCGAAATATAGTTATTTACATTTCTATTATTTTATTACAGGACATTGACTACTCCGGTAGAACTCAT CAGATGTTTGAGGTCTATTAAGGAACATGCATTTGTTGCATCAGAATTTCCAGTTGTAATAACCTTCGAAGACCACCTTA CTCCAGATCTTCAGGCTAAAGTGGCTGAGGTTAGTTGTTATATCATGGAGTTTTAATGGGATTCAAAATGCTTACCTTCT TATAGTTCAAAATTTTGTCCAACGTTTTAGATGGTTACTCAAACATTTGGAGACATATTATTTTCTCCTAGCTCAGAAAG CGTGAAGGAATTTCATTCTCCTGAATCACTTAAAAGGAGGATTATTATATCAACCAAACCACCAAAGGAGTACCTTGAGT CAAAAGAAAAGGAAAAAGGGGATGATTCTCTTCAGGGAAACCCTTCAGGTGATGAAGAAGCTTGGGGGAAGGAAGTCCCA AGCTTGAGAAGTGGTTCCATATCTGATTACAAGGTCTGAGACTAAATCAATCCTTTGTATAAATGGCCGTGTCATTTATT TCTTTTTAAGGGAGATTCGTTAACTGACACTCTGGTTTGTCATTTTTAGGAAATTGATGCGGATAAAGAAGATATTAATG ATGAGCAAGATCTAGAAGAAGCAGATAAATCACATCATAATGTAGCTCCGGAATATAGACGTTTAATTACCATTCAAGCT GGGAAGCCTAAAGGTGGATTAGAGGCATGGTTCAAAGTCGATCCTGATAAAAGGACTCGTTTAAGTTTAAGTGAGCAACA GCTTGAAAAGGCTGTTTTAACTTATGGAAAAGAAATTGTCAGGTATGTTTCTAGTCAGTTCTTTTAAGGGTGACCGCCCT CAGAGTGAATGAAAAGACATCCAAGAACTCTTTATTGTCATGAAACTTTCAGTAAATTTGATTGTTATATACTGCGCCGG ATTTTGATTTTCTGGCTCTCTTGATGCTGCACTGCATCAGTGTCTTATACATATTTACCTGCATTAATAGGTGGCTGACT TAACACCTTGCTTAACACAGTTTCTGATTTCATTAGAGATGTCTAATGCTGTTTTGCTTTCTGCACTTCTGTTGACTATT TTTCCCCTTGTATGATGTTTTACTGTGGTTTGTATAAATCTGTGTGTGCGCGTGCGTGCAAATGAAATGAGATATTCTGA GGGTGTGTCTGTGTGTGTTACAGGTTTACTCAGCGGAATATAATGAGGGTGTATCCGAAAGGCACTCGCATTGACTCGTC AAATTTTAACCCATTAATTGGGTGGATGCATGGAGCTCAAATGGTTGCATTTAACATGCAGGTTTCTATGTCTTACTCTT CTAAATTTCTTCCTCTCTCCCAGTCTTTCATTTTATGTTATTCCTGTTTCAATATTTTCTCTATTTAGGATTATTTTTAT TTGTACTTTCAACTTTTTTGGTTGAGTTCTTTCTTCTTTGAGATATAATAATAAACCTTTGACATCGGCAATGCGGTGGT TGAAATATGGGGCAGTCCTGGTTGAGCATGATTTTTTATTTTTTGAATTTCTTAGATGATGCGTATTATTGACTGCTGCT ACTTTTCCATATCTTGGGATGAGGTTTTAATTCACACTTCTTTCAGCGGTTATTGCTATTGCACACGTTTGATATATCAA TTCTTGCAGTGTGTTGTCGATTATGATATTGCTTGATATTTATCAGTTCTCACTGTGGTTGGTGTCATGGCAGGGGCATG GTAGATCACTTTGGTTGATGCATGGAATGTTCAGAGCCAATGGACGGTGCGGTTATGTTAAAAAACCAGATTTTCTACTA AGTACTGGTCCAGATAATGAGGTCTTCGATCCAAAAGCTAAGTTACCTGTGAAGATCACTTTGAAGGTAAGGATTTTACT TACCATCAGCATTATCATAGTGTCCCTAGTTTGATACCAACAAGGTTCATGCTTATTCTTAGGTGACTGTGTATATGGGA GAAGGATGGTATTATGATTTCAAGCATACACACTTTGATAAATACTCACCTCCAGACTTCTACACAAGAGTAAGTTAAGA TGATCCACTAAATCAATTCTTAACATGTTTGGCTCAGTTTATATTTTCTCAGAATCAATTTTCGCTCCCAGAAACTACTT ACAAAAACTTCTCCCTATAATTAATTTTGACATGAAAATCAATTGTTGAATGATTTTCTAAACCTGATATACTCATTTGA ATTGGATTTACAAACTCTTATGCAGGTGGGGATTGCTGGTGTCCCTAATGATACCATAATGAGAAAAACTAAGGCAATAG AGGATAGTTGGCTACCTTCATGGAATGAGGTATTTGAGTTCCCGCTTACAGTTCCGGAATTGGCGCTGCTTCGCATAGAA GTTCATGAGTATGACATGTCTGAAAAGGATGACTTTGGTGGGCAAACATGCCTACCAGTGTGGGAGCTAAGAAGTGGCAT TCGAGCAGTTCCCTTGCACAGCCATAAGGGAGACAAATACAACTCTGTAAAGCTTCTTATGCGCTTTGAATTTTATTGAT TGTGAATGCTTTTTTTCTACATTATGTACAGTGCATGTTTGGAAATCCGTCTGTGGTTGAAAGAAGCTTCTGTGAGTAGC TTCTAGGTGCCATAATTGATTTTGAGGAAAGAAAAACTATAAACATGCTAAGATATGCTAGTAAGAGTTTGAATTTAGTA GCTGGATGGTATGATGAATGGTGCTTGTTGAAAAGTACTCAGAAATAAAATGTTCTGTGTGTGATTTTGTTGTAAGGCTT GTCAGTATATACTTCCTTAAGTGTTTTGGAGTCTTGAAGTGTTTGCTAATGTTATCATTAAGTGGGATTAGGCTATCCAA GGAAAATAATGTGAATAAATTTTACCTTCTGTTTGATATAATTAATTGAGATTAATT
CDS sequence (LotjaGi1g1v0077600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCGAAACAGACTTACAGTGTCTGCTTCTGCTGGCGGCGGCGGTTCAAGCTAGCTCTGGCGGAGGCGCCACCGGAGAT CAAGACCCTTTTCGATCAGTACTCAGAGAATGAGCTCATGACAGCTTCACAGCTTCAAAGATTCTTAGTTGAGGTGCAGA GGCAAGAGAAGGCCACTGAAGAGGAAGCACAAGCCATCATCGATAGCTTCAAGCATTTCCATCGAAAGGGTCATGGTCTC AACCTTGAAACTTTCTTCAAGTACCTTTTTGGTGACAGCAACCCTCCTCTTGTTCCTTCTCTTGGGGTGCACCATGATAT GACTTTACCCATGTCTCATTACTTCATATATACTGGCCATAATTCCTATCTAACTGGGAATCAGCTGAGCAGCGACTGCA GTGACATCCCCATCGTAAACGCACTGAAGAGAGGTGTGAGGGTGATTGAATTGGACTTATGGCCTAATGCATCAAAGGAT AATGTCGATGTTCTTCACGGAAGGACATTGACTACTCCGGTAGAACTCATCAGATGTTTGAGGTCTATTAAGGAACATGC ATTTGTTGCATCAGAATTTCCAGTTGTAATAACCTTCGAAGACCACCTTACTCCAGATCTTCAGGCTAAAGTGGCTGAGA TGGTTACTCAAACATTTGGAGACATATTATTTTCTCCTAGCTCAGAAAGCGTGAAGGAATTTCATTCTCCTGAATCACTT AAAAGGAGGATTATTATATCAACCAAACCACCAAAGGAGTACCTTGAGTCAAAAGAAAAGGAAAAAGGGGATGATTCTCT TCAGGGAAACCCTTCAGGTGATGAAGAAGCTTGGGGGAAGGAAGTCCCAAGCTTGAGAAGTGGTTCCATATCTGATTACA AGGAAATTGATGCGGATAAAGAAGATATTAATGATGAGCAAGATCTAGAAGAAGCAGATAAATCACATCATAATGTAGCT CCGGAATATAGACGTTTAATTACCATTCAAGCTGGGAAGCCTAAAGGTGGATTAGAGGCATGGTTCAAAGTCGATCCTGA TAAAAGGACTCGTTTAAGTTTAAGTGAGCAACAGCTTGAAAAGGCTGTTTTAACTTATGGAAAAGAAATTGTCAGGTTTA CTCAGCGGAATATAATGAGGGTGTATCCGAAAGGCACTCGCATTGACTCGTCAAATTTTAACCCATTAATTGGGTGGATG CATGGAGCTCAAATGGTTGCATTTAACATGCAGGGGCATGGTAGATCACTTTGGTTGATGCATGGAATGTTCAGAGCCAA TGGACGGTGCGGTTATGTTAAAAAACCAGATTTTCTACTAAGTACTGGTCCAGATAATGAGGTCTTCGATCCAAAAGCTA AGTTACCTGTGAAGATCACTTTGAAGGTGACTGTGTATATGGGAGAAGGATGGTATTATGATTTCAAGCATACACACTTT GATAAATACTCACCTCCAGACTTCTACACAAGAGTGGGGATTGCTGGTGTCCCTAATGATACCATAATGAGAAAAACTAA GGCAATAGAGGATAGTTGGCTACCTTCATGGAATGAGGTATTTGAGTTCCCGCTTACAGTTCCGGAATTGGCGCTGCTTC GCATAGAAGTTCATGAGTATGACATGTCTGAAAAGGATGACTTTGGTGGGCAAACATGCCTACCAGTGTGGGAGCTAAGA AGTGGCATTCGAGCAGTTCCCTTGCACAGCCATAAGGGAGACAAATACAACTCTGTAAAGCTTCTTATGCGCTTTGAATT TTATTGA
Protein sequence (LotjaGi1g1v0077600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSKQTYSVCFCWRRRFKLALAEAPPEIKTLFDQYSENELMTASQLQRFLVEVQRQEKATEEEAQAIIDSFKHFHRKGHGL NLETFFKYLFGDSNPPLVPSLGVHHDMTLPMSHYFIYTGHNSYLTGNQLSSDCSDIPIVNALKRGVRVIELDLWPNASKD NVDVLHGRTLTTPVELIRCLRSIKEHAFVASEFPVVITFEDHLTPDLQAKVAEMVTQTFGDILFSPSSESVKEFHSPESL KRRIIISTKPPKEYLESKEKEKGDDSLQGNPSGDEEAWGKEVPSLRSGSISDYKEIDADKEDINDEQDLEEADKSHHNVA PEYRRLITIQAGKPKGGLEAWFKVDPDKRTRLSLSEQQLEKAVLTYGKEIVRFTQRNIMRVYPKGTRIDSSNFNPLIGWM HGAQMVAFNMQGHGRSLWLMHGMFRANGRCGYVKKPDFLLSTGPDNEVFDPKAKLPVKITLKVTVYMGEGWYYDFKHTHF DKYSPPDFYTRVGIAGVPNDTIMRKTKAIEDSWLPSWNEVFEFPLTVPELALLRIEVHEYDMSEKDDFGGQTCLPVWELR SGIRAVPLHSHKGDKYNSVKLLMRFEFY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 587 | 585 | 0.0 | – | |
| PANTHER | 3 | 587 | 585 | 0.0 | ||
| SUPERFAMILY | 16 | 106 | 91 | 2.49E-11 | ||
| Gene3D | 22 | 97 | 76 | 5.2E-9 | – | |
| Pfam | 26 | 90 | 65 | 1.7E-6 | ||
| Gene3D | 102 | 271 | 170 | 1.5E-46 | ||
| SUPERFAMILY | 105 | 441 | 337 | 4.19E-113 | ||
| ProSiteProfiles | 105 | 249 | 145 | 39.201 | – | |
| SMART | 105 | 249 | 145 | 6.9E-68 | ||
| Pfam | 107 | 249 | 143 | 1.0E-46 | ||
| PRINTS | 110 | 128 | 19 | 1.3E-42 | ||
| PRINTS | 136 | 156 | 21 | 1.3E-42 | ||
| PRINTS | 233 | 250 | 18 | 1.3E-42 | ||
| MobiDBLite | 252 | 298 | 47 | - | – | |
| MobiDBLite | 252 | 269 | 18 | - | – | |
| Gene3D | 311 | 455 | 145 | 1.6E-36 | ||
| SMART | 323 | 440 | 118 | 6.2E-63 | ||
| Pfam | 352 | 438 | 87 | 2.5E-29 | ||
| ProSiteProfiles | 353 | 439 | 87 | 37.327 | ||
| PRINTS | 378 | 399 | 22 | 1.3E-42 | ||
| PRINTS | 399 | 417 | 19 | 1.3E-42 | ||
| ProSiteProfiles | 446 | 553 | 108 | 12.884 | ||
| Gene3D | 456 | 588 | 133 | 1.2E-26 | ||
| CDD | 458 | 588 | 131 | 2.76734E-37 | – | |
| SUPERFAMILY | 460 | 587 | 128 | 2.28E-26 | – | |
| SMART | 460 | 568 | 109 | 3.2E-12 | ||
| Pfam | 461 | 561 | 101 | 1.2E-9 | ||
| PRINTS | 554 | 564 | 11 | 1.3E-42 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Phosphatidylinositol phospholipase C activity | Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H(2)O = 1,2-diacylglycerol + 1D-myo-inositol 1,4,5-trisphosphate + H(+). | ||
| Biological process | Lipid metabolic process | The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids. | ||
| Biological process | Signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. | ||
| Molecular function | Phosphoric diester hydrolase activity | Catalysis of the hydrolysis of a phosphodiester to give a phosphomonoester and a free hydroxyl group. | ||
| Biological process | Intracellular signal transduction | The process in which a signal is passed on to downstream components within the cell, which become activated themselves to further propagate the signal and finally trigger a change in the function or state of the cell. |
Expression pattern of LotjaGi1g1v0077600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…