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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0079200 |
| Transcript ID | LotjaGi1g1v0079200.9 |
| Related isoforms 10 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Auxin influx transporter; TAIR: AT2G38120.1 Transmembrane amino acid transporter family protein; Swiss-Prot: sp|Q9FEL8|LAX1_MEDTR Auxin transporter-like protein 1; TrEMBL-Plants: tr|V7B7B9|V7B7B9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0079200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:11419406..11425718) extracted from Lotus japonicus Gifu genome v1.2.
ATGTTACCCCAGAAGCAAGGTGAAGAAACCATGATGTCAAGCCTGAATGAGGCGATTGAGCATGGCGAAAGAGAGGAAGA GAATGAAGGTGGTGGTTCAGGGCTGAAGAACTTTCTCTGGCATGGTGGCTCTGTTTATGATGCCTGGTTCAGCTGTGCTT CAAATCAGGTAGTGAGATATGGGGTTTGTGAATTGTGAGTGCTGGTCTAATCATTGGAAGTGAGATTCTGTGACCCTTTT TTGGTGTGTGTGAGGGAATTTGATTCGTTTTTGGGTTTGTGCTGTGCAGGTTGCACAGGTTCTGTTAACACTGCCATACT CTTTCTCTCAACTTGGAATGCTTTCAGGAATCATTTTCCAAATCTTCTATGGCTTGCTTGGTAGCTGGACTGCTTATTTG ATTAGTATTCTGTATATTGAGTACAGAACCAGAAAAGAGAAAGAGAATGTTAGCTTCAAAAACCATGTCATTCAGGTTGG TTGCTTACAACATATTTGAATCAGCTTTTTTTCCTCAATCAATTCTGAACTCCGACTTAATTGATTCTGGCCTCAGAAAG AAACCCGGAAAAAGAAAAAATGAAAAGAATTTTTGAAAAAGTTGATAGATTGATAGCATGTTTGTGACATATTATCTTCC ATCATAATCATTTCTGAAACAGCTACTCGAAGAAAGCTATTCCCCGCAGAATTGATATTAACTTCAGAATCAATTGTAGA AGAGTTTTCAAACATTCTCTAAGATTAATGGTTTTTAGTTCATTTTGTGCAGTGGTTTGAAGTGTTGGAAGGTTTACTGG GTCCATACTGGAAGGCCATTGGATTGGCCTTCAACTGCACTTTTCTCCTCTTTGGATCTGTTATCCAGCTTATAGCTTGT GCAAGGTTTGAACTGAACTGAAATTCTTTTGATTATAGCCTGTATCTATTTAGATACTTGAAAGACAGTGAGATTTGTTC ACTTTTTTATGTATCGGCTTATTTTTCTCCGGCTTAATCCAGTTTTTGGTCCCTACCCTTTGTCATAAATATGGCTTTAG TCCCTCGCCGGAGCAAAGGTGGTGATTGGTCCCCAATTTTTTGCAAAATAGTTGCCTTTGATCCTTCCGGCCGGTTGGGT CAACGCCGGAGCTCCGCCAGCTGACGAGCCACGTCAATTAATGAAGTCCAGGTGGCTTTTTTTCATTTAAATTCTAAAAA AAATATAATTAAAACCCTTAATTAAATCCTTCATTTAATTAAAAAAAATCATTGTTCATCTTCTGGATTCATCCACACAT CTCTCATCATCATCATCTTTCACCATCATCAACATCCTCCCCTCTTCGTTCAACCCCCCCCCCCTCTCCCCCTGGGTTTC GATCTGCCTCAGCTTGGTGGTGTTTCTAGGTTCGTCGTCGTTCTTTTTTCTTTCATATCTGTAGTGTGGGTATGGTCTCG GTGGGTTGGGGTTATGGGTTTTGGGGGTGGGAATTTCGATGGCCGTGGTGGGTGGGGATTATGGGTGTGGTGGATATGGG TTGCGGTGGGTGGAGAAAAGGGGGCCAGATCTAGAGGAGGAGGAAGAAGATGAAAGGGAAGCTAGGGTTTAAAGTGTGCT TCTTGAGGCCTTGAATTCATATTGCATTATTTTCTGTAATTGCTGCAGACTGAGGCGGAAGTTTGCTGCAGAAATTGGGT TCTTTTGGTTTTTGATTGCTGTCATGTGTTTGGTGCCTTGTTGCGAGCCTACTGTTGGTTTGTTTACTTTGGGGGTTGGT TTAATGGTGCTATTTGCTAGTTTGTGTTTGGCAGCAACTGTGTCTGCATTTTATTTTTTCTTGGAATTTTTCTGGTAGAG GAGAAGGAGGAAGAAGAGGCTGGGAATATGGTTAAGATATGTATGGGGTTACTGGGTACAGTTAGGAGAATCTGGATTTT TTGTGTTTTTGAAATATCTGTTTTTTTTTTTGAAACTAGAAAAATCTAGGTTGAAGAAGATGATTAAGAAGATGTTGATA AGAAGATAGATGAGTTTTTTTTTTGAATTAATTAAGAAGGAAGTTAATTAGTGAGTAATTAGTTGTGTTTTAATTTTATT TTTTTTAAATGAAAAAGAAAAAAAAACCACCTCGACCTCATTAATTGACGTGGCAAGGCCACATCAGCTGGTGGAGCTCC GGCGTTGACTCAACCGGCCGGAAGGACCAAAGCCAACTATTTTGCAAAAAACTGGGGACCAATCCCCACCTTTGCTCCGG CGAGGGACTAAAGCCATATTTATGACAAAGGATAGGGACCAAAAACTGGATTAAGCCTTTTTCTCCCGAATCAATTTTGG TATCCAGAAGCTACTTACATGAGCTTCTTCGCAAAATTGCTTTTGACTTTTGAATCAATTTTAGAAAGATTTCCAAACAT GCAATTAAGAATTTGATTTGGATTTTTGTGGTATGCAGTAACATATACTACATAAATGATCACTTGGACAAGAGGACTTG GACTTACATATTTGGAGCTTGTTGTGCCACCACAGTGTTCATACCCTCATTCCATAACTACAGGATTTGGTCTTTCCTTG GCCTTGGCATGACCACATACACAGCTTGGTACTTGACCATTGCAGCTGTTGTTCATGGCCAGGTAACTTAAGCAAACATT ACCAAATACCAAGTACAACTTGTGGTCCCGATTTCTTGATCGAGGTCTCTGATACCAGTTGAGTGCAATGTAAATAAACT TCTGGGGGATAACTTTGCAGGTTGAAAATGTGAAACACACGGGCCCAAACAAATTGGTTTTGTATTTCACAGGCGCCACC AACATCCTCTACACTTTCGGCGGCCACGCCGTTACAGTGTAAGCACCAATTTTTTTTAATGTTTTAGCTTATTGGGTTAG ACAAAACAATCATGATAGTGTTCTTTATTGTCCTGAGACAATGAAACATCAAAGATAGTAGGAGAAGTTTATTGCACGGC CACTTTCTTCAATTGCAGCTTTTGCCTCCATTCTAATGAGGACCTTGTTGTGAATAAGACAAAACTGTTAAATGTGGCAC TTTTGAACACCCATTACACTAGTGTCTTGGCTCACAGTTATACTCTGCCTTTATCAATTAAAAGACTTCAAAGTTCAGAC CCCCCACTTGAACACTTGAACTTTATTCTTAGAACGTGAAGCCTCTTCATATTTTGCTTTTTCCCTAATAAATCATGTTC ATGTTTGTAAATCTTTCTACAATTGATTCTGAAGCTAGAATTAAGTAAGTTTCTGTGAGTAGCTTTTAGATTTCAAAATT GATTATGATGAAAGTAAAGTTAATTTAAACATGCTACATGATGTAGATTTACAATTTGCATCTATAAGATAACTTCATTT GTGATATTTAACTGCACAATGTGTAAATTTGTTAATCCAAACTTAGAATTGATAGATTGTTGGATGACTATATGTTCTTC AATATTTGTTAAGACTTTTTTGTATGATCTCTCTATGTTGCTTCTAGTATCACTATCATGGAAGTAGAAAAATAAGTGCG TAGTACTAAATTGTGCTATTCTTTAATTATCTTATTAAGAAATTCTCCACTTGTTTCTTTTCTAATATGATATCTTGATA TCAACTTTCTTGGAGAAATAAAACAATGGATTTATTTACTAGAAACAAGAAAGGGTGCAAATTCAGCTAGAAAACAATTA TTACATATTTGGACATATCCCAGAAATGACAGACCCAATTTCACTTTTGGATTTGGAGCATAGTGGTAAGAAAAAAGAAG GAAGTTGATTAAAAGAGCATAGCATAGCACATGGGTGATTTGAAGATATATGCTGATGTTGCAGTGTACACTAACATATT GCTGGACCATGTTACTATTACAGGGAAATCATGCATGCAATGTGGAAACCTCAGAAGTTCAAATATATCTATCTTTTTGC CACACTTTTTGTGTTCACCCTTACCCTACCATCTGCTATTGCTGTCTACTGGGCCTTTGGTGACCAACTCTTGGACCATT CCAATGCCTTCTCTCTTCTACCTCGCAATGGCTGGCGTGATGCTGGTGTCATCTTAATGCTCATTCACCAGGTCTATATA CATGTTTCTTTTTTCCTTTCCTTAAAATTGCTCATATACTAGATAAATAATTATTACTTTAAGAGCACCTTATGAATTGG GATTCCCTACAATCAGGGAATCCTATGGTTCATATGTATAAAGAGACTATTTTTAAGGTATAATTAACTCTTTAAGTCTG AGCTGTTTGATCAAGATCAGACTGTTAAAGACCCTTGACTACACCGAATGCAGGATTATCTGACTGCATGGAATCAAGGA TCACGACTTTAATTCAAATCCCCTACAATCAGAGAATCCTAAATTCAATGAAGTCAGGGAACTGCAGTCGTGCAGTCGTC TGATCAAAGATCCTACGGTTCAAGGTCCGAGCCGTCTACTCGGTGAGGACCCTTACTACAATGATTGTAGTATTCCCTGA CTGCAGGGAATCCGAGTCCATAAGACTTTAGACCTAGAGTCCTCAGCAGTCTCATTTTTTAGAAACTACAAAGTGTAGCT TACCGTACTTTGACTGCTTTCGATTTTGTGCTAACATCAACCCAAACATGCTATATTACAAGTGGGAAAATGAAGAAGTT TTAGAAACTTATGTATTTCTATTTCTATGTGAATATGGCAGTTTATCACCTTCGGATTTGCTTGTACCCCATTGTATTTT GTGTGGGAGAAAGTGATAGGAATGCATGACACAAAGAGCATATTTTTGAGGGCTCTAGCCAGGTTGCCTGTGGTGGTACC AATATGGTTTTTGGCCATTATTTTCCCATTCTTTGGCCCCATCAACTCTGCTGTGGGGGCTCTTCTGGTTAGCTTCACCG TCTATGTCATCCCTGCCTCCGCCCATATGCTTACTTATAGGTCTGCTTCTGCAAGACAGGTAAATATTGTCCCCATCTTT TGTAAACGAGGATTATATTGTCATTATTGTATATTGTCATTATTGTATATATTTACCTTCCTAGTTTAGGTTTCACATCT TATGTTTCAATAAATGAAAATTGCTTCTTTCACACCATAGTTATATACATTGTACCCTCACATATTTATTTCTTAAGGTA AAAATGGGATAAAGAAACTAAAGTTTCAATCTCTCCATTGTTCTAAGGGTGGGTGAATGAAAAGTCATAAAATATGATGC TTGTCTCATCCAACTGACTTTGTGTGTGTTTGAATACGAGTTGAGTGCAATGTGAACAAACTTTGTGCCTAATTCATAGG AGTTTCTCATTCACTTTTTGTCTTGAAATGCATGCTAACATTTGTTTGCACTAGTGCCGACAGATATCCAAAAATATTAT TAATTGAGTCCATAGTGAATTTCTCTTGTCCATTAATAAGATAAGTTAATAAGCACTATTGAGGCCTGTTCTAGTCAATG TGGTTTTTTTAATAATATGCTGCTCATGCATTCTATTCCAACCTGTAGCTAGCTTTAGTACTGCAATAAATTAAACTAGG TACTGTGTCTGTGTTTTATGTCCTCCCCAAAACCTAAGACCTTCCAGAGAAAGCTTTCAATGAATAGGGCTAGAATGGGA ATCCAGTACTGTCCATTTTTATGAGGTGATCTTAGAAGCATTTGGAAGAGCTTCTTTTTCATCACATACAATTTTGAAAC TCATAAGCTACACACAAAAGCTTCTCCTAAAAATTGATTTTGGCTTCAGAATCAATTGTAGAAACACTAAATGAGGTTCT TAAAACTCCTTCTGTGGTGTACATGTGTTTGAGGATATATACAGCTTCATGATTTAACTTGGAAGTGGCTTCCTATGTCA CTGGCAGTACAAGTCCCAGTCCCACCACCAATACTATGCTATGCTAACCATATGTCCCCTACATTTTAACAATGAGCTGG ACCATGGCCAACCGAAACACTCTTAAGTGGCCCTACTTAGTACTCAAGTTAATGTTCCTGTTCTAGCATGTTTCTAACAG TTCCTATTTTCTCAAAATTAATTTTGGCACCCAGAAGCTATTTAGATAAAAAAATTCCCAGCTGACACTGCTTTTATCTC ATGTTCATTTTCAGAATGCTGCAGAGAAATTGCCCTTCTTCATCCCAAGCTGGACTGCAATGTTTGTGTTCAATGCATTT GTGGTGGTATGGGTTACTGTAGTAGGCTTTGGATTTGGAGGGTGGGCTAGCATGACAAACTTCATCAAGCAGGTTGACAC ATTTGGACTGTTTGCCAAGTGCTACCAATGCCCACCAAAACTCTCAGCTTCCAACCATACACTGCACCACTGA
CDS sequence (LotjaGi1g1v0079200.9) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTACCCCAGAAGCAAGGTGAAGAAACCATGATGTCAAGCCTGAATGAGGCGATTGAGCATGGCGAAAGAGAGGAAGA GAATGAAGGTGGTGGTTCAGGGCTGAAGAACTTTCTCTGGCATGGTGGCTCTGTTTATGATGCCTGGTTCAGCTGTGCTT CAAATCAGCTTGGAATGCTTTCAGGAATCATTTTCCAAATCTTCTATGGCTTGCTTGGTAGCTGGACTGCTTATTTGATT AGTATTCTGTATATTGAGTACAGAACCAGAAAAGAGAAAGAGAATGTTAGCTTCAAAAACCATGTCATTCAGTGGTTTGA AGTGTTGGAAGGTTTACTGGGTCCATACTGGAAGGCCATTGGATTGGCCTTCAACTGCACTTTTCTCCTCTTTGGATCTG TTATCCAGCTTATAGCTTGTGCAAGTAACATATACTACATAAATGATCACTTGGACAAGAGGACTTGGACTTACATATTT GGAGCTTGTTGTGCCACCACAGTGTTCATACCCTCATTCCATAACTACAGGATTTGGTCTTTCCTTGGCCTTGGCATGAC CACATACACAGCTTGGTACTTGACCATTGCAGCTGTTGTTCATGGCCAGGTTGAAAATGTGAAACACACGGGCCCAAACA AATTGGTTTTGTATTTCACAGGCGCCACCAACATCCTCTACACTTTCGGCGGCCACGCCGTTACAGTGGAAATCATGCAT GCAATGTGGAAACCTCAGAAGTTCAAATATATCTATCTTTTTGCCACACTTTTTGTGTTCACCCTTACCCTACCATCTGC TATTGCTGTCTACTGGGCCTTTGGTGACCAACTCTTGGACCATTCCAATGCCTTCTCTCTTCTACCTCGCAATGGCTGGC GTGATGCTGGTGTCATCTTAATGCTCATTCACCAGTTTATCACCTTCGGATTTGCTTGTACCCCATTGTATTTTGTGTGG GAGAAAGTGATAGGAATGCATGACACAAAGAGCATATTTTTGAGGGCTCTAGCCAGGTTGCCTGTGGTGGTACCAATATG GTTTTTGGCCATTATTTTCCCATTCTTTGGCCCCATCAACTCTGCTGTGGGGGCTCTTCTGGTTAGCTTCACCGTCTATG TCATCCCTGCCTCCGCCCATATGCTTACTTATAGGTCTGCTTCTGCAAGACAGAATGCTGCAGAGAAATTGCCCTTCTTC ATCCCAAGCTGGACTGCAATGTTTGTGTTCAATGCATTTGTGGTGGTATGGGTTACTGTAGTAGGCTTTGGATTTGGAGG GTGGGCTAGCATGACAAACTTCATCAAGCAGGTTGACACATTTGGACTGTTTGCCAAGTGCTACCAATGCCCACCAAAAC TCTCAGCTTCCAACCATACACTGCACCACTGA
Protein sequence (LotjaGi1g1v0079200.9) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLPQKQGEETMMSSLNEAIEHGEREEENEGGGSGLKNFLWHGGSVYDAWFSCASNQLGMLSGIIFQIFYGLLGSWTAYLI SILYIEYRTRKEKENVSFKNHVIQWFEVLEGLLGPYWKAIGLAFNCTFLLFGSVIQLIACASNIYYINDHLDKRTWTYIF GACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIAAVVHGQVENVKHTGPNKLVLYFTGATNILYTFGGHAVTVEIMH AMWKPQKFKYIYLFATLFVFTLTLPSAIAVYWAFGDQLLDHSNAFSLLPRNGWRDAGVILMLIHQFITFGFACTPLYFVW EKVIGMHDTKSIFLRALARLPVVVPIWFLAIIFPFFGPINSAVGALLVSFTVYVIPASAHMLTYRSASARQNAAEKLPFF IPSWTAMFVFNAFVVVWVTVVGFGFGGWASMTNFIKQVDTFGLFAKCYQCPPKLSASNHTLHH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 62 | 62 | - | – | |
| PANTHER | 3 | 448 | 446 | 3.2E-240 | – | |
| PANTHER | 3 | 448 | 446 | 3.2E-240 | – | |
| Pfam | 52 | 420 | 369 | 4.7E-70 | ||
| Phobius | 63 | 85 | 23 | - | – | |
| TMHMM | 63 | 85 | 23 | - | – | |
| Phobius | 86 | 121 | 36 | - | – | |
| Phobius | 122 | 144 | 23 | - | – | |
| TMHMM | 124 | 146 | 23 | - | – | |
| Phobius | 145 | 155 | 11 | - | – | |
| Phobius | 156 | 174 | 19 | - | – | |
| TMHMM | 156 | 173 | 18 | - | – | |
| Phobius | 175 | 180 | 6 | - | – | |
| TMHMM | 178 | 200 | 23 | - | – | |
| Phobius | 181 | 204 | 24 | - | – | |
| Phobius | 205 | 215 | 11 | - | – | |
| TMHMM | 215 | 237 | 23 | - | – | |
| Phobius | 216 | 238 | 23 | - | – | |
| Phobius | 239 | 249 | 11 | - | – | |
| TMHMM | 250 | 272 | 23 | - | – | |
| Phobius | 250 | 274 | 25 | - | – | |
| Phobius | 275 | 295 | 21 | - | – | |
| Phobius | 296 | 320 | 25 | - | – | |
| TMHMM | 298 | 320 | 23 | - | – | |
| Phobius | 321 | 331 | 11 | - | – | |
| Phobius | 332 | 356 | 25 | - | – | |
| TMHMM | 340 | 357 | 18 | - | – | |
| Phobius | 357 | 361 | 5 | - | – | |
| Phobius | 362 | 383 | 22 | - | – | |
| TMHMM | 362 | 384 | 23 | - | – | |
| Phobius | 384 | 403 | 20 | - | – | |
| TMHMM | 397 | 419 | 23 | - | – | |
| Phobius | 404 | 428 | 25 | - | – | |
| Phobius | 429 | 463 | 35 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0079200.9, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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