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Field | Value |
---|---|
Gene ID | LotjaGi1g1v0079500 |
Transcript ID | LotjaGi1g1v0079500.2 |
Related isoforms 5 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | ATP-dependent RNA helicase DeaD; TAIR: AT1G20920.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q8H0U8|RH42_ARATH DEAD-box ATP-dependent RNA helicase 42; TrEMBL-Plants: tr|V7CJE2|V7CJE2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0079500 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:11478765..11484907) extracted from Lotus japonicus Gifu genome v1.2.
GCTATTGTATTTTGCACTAAGACAGAGACACAGGGTAGCGTTCGCGATTTTGTTTGTTCGTTGCGGCAGCGACGTTTCTA AGTGAGGGAGAGGGAGTGCCCTAACTCTCAACCTTCGCATCTTCCCAAATCCGTTTCATTCTCGTTAGGGTTTTGTTCCG ATTTTGAGACTGCGTTGCAAATTCTACTCTTCAATCAACCAATCTCGTTTCATCGGTATGCAATTCACATTCTCTGTTAT CAATTCATGATTTTCATTGATGCGCCTTATTTTTTGTTTTTCCTTACAAATTATTTGCTGTGTTAATTACTTTGGATATT TGGATATGCATCTGCGTGCATGCTGAATGATTTTGCTTCTAGGATTCAAGAATTTACTTTCTAGGGTTCACGAATTTTCA TTCTAGGGTTACGGTTGCTAACAGTTTTATGTGAATTTGTAGGTGGAAGGGGAAACAATGGAGGAGGTAAAGCATAAATC GAGGAAAGAAGATTATGAGGTGAAAGAAAGCGAGACGAAGAGGAGTCACCGTGATCGTGATCGAGAGCGTGTTAGAAAGG AGAGAAGCGAGGGGAGGCATAGGGATAGGGAGAAGAGGGATCGTGAGTCGCGGAGACATGAGAGGGAGAAGAGTACTGAC TCTGAAGATAGAGACAGGGAGAAGAAGCGCAAAGATAAAGATAAATCGAAAGATAAAGAGAGAGAAAAGGGTCGAGATAA GAAAAGGGACAGAGATAGGGAAGACAAGGAGAGGGAAAGGGCGGAACGAGCAAGGGAGAAAGAAAGAGAGAGGGAGAGAA AGGAGGAGAAGGAGAGGATTAGAGAGAAAGAAAGGGAACGGGAGCGGGAAAAGGAAAAGGAAAGGAGGGATCATGAAAGA GAGAAGGAAAAGGAAAGAGAAAGAGAAAGAGGGAGGAGAGTACGTGACAGGGAGAAGCATAGGGATGATGATAGTGAACA CAGTGATAGTGAACCCAGGGAGAGAGATAGGAAGCGGCATAGGAAGGAGGATGACGGTTACAAGGGGAGAGAGAGGGAAA GGAGCAGTGGCAAGTCAAACAGGAAAACTGAGGAACTTGAAGCAAGTCCAAGGAAAAAGAGTGATGGAGATGACTCAGAT ACCAAAGAAAAGGAGATAAAACCTACCCGTGAAGAGGAGATGGAGGATGAACAAAGGAGGTTGGATGATGAAATGGAAAA GCGGAGGAGGAGAGTTCAAGAGTGGCAAGAGCTAAGAAGGAAGAAAGAAGAAGCAGAAAGAGAAAAGGGTGGTGAAGCAA GTGCTATTGAGCTCGAGTCTGGAAAGACCTGGACACTTGAAGGGGAATCGGATGATGAAGATGGAACAGGTACTGGGAAG CTAAATACAGATATGGATGTAGATGAAGATGACAAATCTGCTGATAAGGAACCTGGGGACTCGATGGTTGTAGATGTTGA TAATGGAGCAGTTGCATCTGATTTACAGAATGGGGCTGCTGATGCTTCTCCTGATGAGGAAATAGATCCATTGGACGCTT TCATGAATTCAATGGTTCTTCCTGAAGTTGAAAAGCTGAACAATGCTGTTACTTCGTCATTTGTTGATAAAGCTGCAGAC TTAAACCCGAAGGATAAAGGGGATGAGCGAAGTAGTAGTGCACATCCAAGGAAAGGTTCAAATAAATCTATTGGCAGAAT AATTCCCGGTGAAGAGTCTGACACTGAATATGCAGATCCTGAAACTGAGGGGGATGATGTAGATGAAGATGATGATGAGT TCATGAAAAGAGTGAAGAAGACAAAAGTTGAGAAGCTTTCTATTGTTGACCACTCAAAGATTGACTATATACCATTCAGA AAGAATTTTTATATTGAAGTGAGAGAGATCTCGAAGATGACTCCTGAAGAAGTTTCAGTATACAGGAAGCAGTTGGAGTT GAAGATACATGGGAAGGATGTGCCTAAGCCTGTAAAATCATGGAACCAGACTGGGCTGACTAGCAAAATTTTGGAGACAA TAAAAAAACATAACTTCGAAAAGCCTATGTCTATTCAAGCTCAGGCGCTGCCTACAATTATGAGTGGTCGAGATTGCATA GGTATTGCTAAAACTGGGTCAGGTAAAACACTTGCTTTTGTTCTGCCAATGTTGAGGCATATCAAGGATCAGCCGCCAGT TGTTGCAGGGGATGGACCTATTGGGCTTATCATGGCTCCTACAAGGGAACTTGTTCAACAGATTCACAGTGATATAAAGA AGTTTACTAAGGTACTGGGTATCAGGTGCGTGCCTGTCTATGGTGGTTCAGGTGTTGCTCAACAAATCAGTGAGTTGAAA CGTGGTACTGAGATAGTGGTTTGTACTCCAGGTAGGATGATTGATATACTATGCACCAGTAGTGGGAAAATAACTAACCT GCGGAGAGTCACTTATTTGGTTATGGATGAGGCTGATCGAATGTTTGACATGGGCTTTGAACCTCAAATCACACGAATTG TTCAGAATATTCGGCCAGATCGTCAAACAGTTCTCTTCTCTGCTACTTTCCCCCGCCAGGTTGAAATTCTGGCACGCAAG GTTTTGAATAAACCTGTAGAAATACAAGTTGGCGGGAGAAGTGTTGTGAACAAAGACATATCACAGCTAGTTGAGGTGAG GCCAGAAAATGAGAGGTTCTTTAGACTCTTAGAAATACTGGGCGAATGGTATGAGAAAGGAAAGATCTTGATATTTGTCC ATTCACAGGAGAAATGTGATTCTTTGTTCAAGGATCTGCTCAGGCACGGTTACCCATGTCTTTCTCTTCACGGGGCTAAG GATCAGACAGACCGTGAATCCACAATTTCTGATTTTAAAAGCAATGTCTGCAATTTGTTGGTTGCAACAAGTATTGCTGC CCGGGGATTAGATGTCAAGGAGCTCGAATTGGTGATCAATTATGATGTTTCAAACCACTATGAAGATTATGTACATCGTG TTGGGCGCACTGGCCGAGCTGGCCGTAAGGGTTGTGCCATTACATTTATTTCTGAGGAAGAGGCAAAATATGCACCAGAT CTGGTGAAAGCCTTGGAGCTATCTGAGCAGACTGTTCCCGATGATCTGAAAGCTCTTGCTGATAGCTTTATGGCGAAAGT CAATCAAGGACTGGAGCAAGCGCATGGGACTGGTTATGGAGGAAGTGGCTTTAAGTTTAATGAAGAGGAAGATGAGGTGA GGAAAGCAGCAAAGAAAGCGCAAGCCAAAGAATATGGGTTTGAAGAAGACAAGTCAGATTCTGAAGATGAAGATGATGGT ATTAGGAAGGCAGGTGATGTCTCACAGCATCCTGCTCTTGCTCAGTTTCTTGCTGCCTCAAAAGTGAATACTTCTGTGAT GCACACTCCCATCTCAGCTGCCCAGCTCATTCCAAATGGTGGACTACCTGTTCCTTTGCCAATTCTCCCGACTTCAACAG TCTTGCCTGGGACAGGGCTACCCCTTGCTACAACTGATGGGGCAGCTCGAGCAGCATTAGCTGCTATAAACCTGCAGCAC AACTTGGCAAAAATACAATCTGAAGCATTGCCAGAGCATTACGAGGCTGAGTTGGAAATAAATGATTTCCCCCAGAATGC TCGCTGGAAAGTCACACACAAGGAAACCTTAGGCCCCATTTCTGAATGGACTGGAGCTGCCATTACCACCAGGGGGCAGT TTGTCAACCCTGGCAAAATCCCAGGACCTGGGGAACGCAAGCTCTACTTGTTCATTGAGGGTCCTAGTGAGCAATCAGTT AAGAGAGCCAAAACAGAATTGAAGCGTGTTTTGGAAGACATCACAAACCAGGCTTTGCAACTTCCTGGTGGATCTCAACC AGGCAAATACTCTGTCGTATAAGGGGTAAGATCCTGATCTAATTTAGCATTGTATTGTTTATTTTACTATAGTGGCTGTT ACATGCTCATGTTACATACTTTCTAAGGGAAATGTGACTGTTCTGCTTAGTAGTTTTTGTCTCGTTATCAATTTCGTTCC TCATTGATATACAGCTGTAGAACATCCTTTGCTGGATGGTCTGACTGATTTGATTTAATTTTTTTCCTTTATCCTTTTTG GGTGCATTTCTTTTAGGTTCTGAAATCTAATGAGCATGACTTAGTTTATAATCAGATCTCATAGCTAGTAAATGGCTGAT ATTTGTTTAGCTGTATTTGTTTAGTTAATTTATTTTTAAGAAGTCCTGCAACCTAAGAGTAAATCTACTTTTGGTAGTCA ACGTGAAGGCAAAATGGGAATCTGTTAAACACTCTTGTCTCGCGCCCCGATCCGGGACAAACTGCTCATATAGTCTGCCT TTACCCATTCATGGTCATACAGGTATGATGATTATTGTGGAAACTGCTGCCCATCTTTTTTTGGCCCTGTGTGTTTGCAT GTATGAAACTTCTTTTGATATCTTTTTGAATACCAACCAATACTACGATGTCATGCTATTGTTTAAATTTTATTTGCACA AAATTTCTATCCTTTTGATGGTTATCTTCCTTTGTTCATCATTCACTTTGGTGTAGGTGGGTCTAATGAGCCTACGCTTG CATGTTCAATATTGCTCTATCCACTGCGCTTGCTTCATGGCTCTCTAATGTGCTGATCATGGTGTGGCATTTTTACGTCT ACTTCCTGTTTGATTTGAAGCAAACATTCTCGAACTACTGGTTTTGCCTGGTTTTGTGATTTTTGATGCTATTGTGGATT TGTTTATCTGATGTCACGTCTATCTCTCAGGTTTCGGTTTGGCGTTCTCTTGTCATGTAGAGAAACAAGATATGATGGGG AGATCGCATGATTCGGATATTGATGGCCTTGCCTAACTGCTATGGTTTGGATTTCTGCACATGCTTAAGTTTACCATATC ATAACTATGCTTAATAGCCAGTTTAGGGCTCATAGTGCTATTAGGTTATTGCGCTCTGCCCTAGTTTCGTTGAACTTTTA TGTTATAAACTTTGATTTGGTTTTCTTGAAGTTTTTTCAGGTATTATTGATAGAAAATTTATTAAATATGCTGGACAGTC CTCAATATAAAGCAGAGAAGTGATTAGTTAATTTGTTTGTATCGATAGTTCTCTGTCATGATTTTAGTAACGTCCATTTT TGCATTTGCACGTCTTTTTAGAATGTGAGACGCTTACAGGTAAAAATGCTAAATGTCACAAGGAAGCTCGTAGAAACATA CACTCGATCTCATATATGCACTAGGATCATAGTAATTTTGCATGCCAGGAAAAATATAGAGATAATGTCTCATTATTGTC GCGTGAATTAGAGTACCCTAAATTTTATGGATTACGTTTGAGGGCCTATAGAAAAGAAGAAAAAAAACTCATGCATGTGC TCACTTATCGTTGTATGGTATGTTATAGTTTTAAGTGCTCGTATCGTATGTATTTGTTTTTCAAAATTTTAACTTTTTAT CGAAATTTGAATAAGAAAATTTTGTTGTTTATATCAATTATATTGAATTTTACTTATAGATGACTTGATACTGATTTTAT TTCTTTAACTTTTTATTTAATATTTTTTGTTCAGTAACATTCCTTAGCAATTTGATTCTGGTGAAATTATATTTATATAA TCACTTTGAAATACATTTAGTTGTTTATTATTACGTTCTTGACATTCTTTTAATTTTAGAAAAATATATCTAGTATTGAT AATTTAAGGGAGGCGCAAATCGATCAAAGGCCATGCCATGGTGTTCTTTACAAGTCTAGACCAATAATCACAACAAACCG CTTTTGAAAGAGAGTGGTGGCAGTACAAAGTAGGTCATGTGCCCATTTGAGTGGGCGTTTCATTTCCAAACGCGCGTTAG CACCGCTTGGATCTGAACGCTTCTAATTGTAGCTTCTTCCAAAACGCATGTCCCCATCACTCCACGCCGCTAAGGCAAAC GGGCCCTATGGGGGCAAAACAAAGGTACATTGACACGGACAAGCTATAGACATGGAAAAGAGTGTTAAGGGTTGTGGATA CTTACCTCATTCGTGTTTGTCACTTTGAAAAAGCTTGAATTTTACCCATCCCTGGCAACATGGAAGGTGTCCCTGTTAGG ATGTTTGAAGGCTAAGAGGACTGATCTGGTTTGAACATTGTATGGATATATGATGGAGTTTGG
CDS sequence (LotjaGi1g1v0079500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGGAGGTAAAGCATAAATCGAGGAAAGAAGATTATGAGGTGAAAGAAAGCGAGACGAAGAGGAGTCACCGTGATCG TGATCGAGAGCGTGTTAGAAAGGAGAGAAGCGAGGGGAGGCATAGGGATAGGGAGAAGAGGGATCGTGAGTCGCGGAGAC ATGAGAGGGAGAAGAGTACTGACTCTGAAGATAGAGACAGGGAGAAGAAGCGCAAAGATAAAGATAAATCGAAAGATAAA GAGAGAGAAAAGGGTCGAGATAAGAAAAGGGACAGAGATAGGGAAGACAAGGAGAGGGAAAGGGCGGAACGAGCAAGGGA GAAAGAAAGAGAGAGGGAGAGAAAGGAGGAGAAGGAGAGGATTAGAGAGAAAGAAAGGGAACGGGAGCGGGAAAAGGAAA AGGAAAGGAGGGATCATGAAAGAGAGAAGGAAAAGGAAAGAGAAAGAGAAAGAGGGAGGAGAGTACGTGACAGGGAGAAG CATAGGGATGATGATAGTGAACACAGTGATAGTGAACCCAGGGAGAGAGATAGGAAGCGGCATAGGAAGGAGGATGACGG TTACAAGGGGAGAGAGAGGGAAAGGAGCAGTGGCAAGTCAAACAGGAAAACTGAGGAACTTGAAGCAAGTCCAAGGAAAA AGAGTGATGGAGATGACTCAGATACCAAAGAAAAGGAGATAAAACCTACCCGTGAAGAGGAGATGGAGGATGAACAAAGG AGGTTGGATGATGAAATGGAAAAGCGGAGGAGGAGAGTTCAAGAGTGGCAAGAGCTAAGAAGGAAGAAAGAAGAAGCAGA AAGAGAAAAGGGTGGTGAAGCAAGTGCTATTGAGCTCGAGTCTGGAAAGACCTGGACACTTGAAGGGGAATCGGATGATG AAGATGGAACAGGTACTGGGAAGCTAAATACAGATATGGATGTAGATGAAGATGACAAATCTGCTGATAAGGAACCTGGG GACTCGATGGTTGTAGATGTTGATAATGGAGCAGTTGCATCTGATTTACAGAATGGGGCTGCTGATGCTTCTCCTGATGA GGAAATAGATCCATTGGACGCTTTCATGAATTCAATGGTTCTTCCTGAAGTTGAAAAGCTGAACAATGCTGTTACTTCGT CATTTGTTGATAAAGCTGCAGACTTAAACCCGAAGGATAAAGGGGATGAGCGAAGTAGTAGTGCACATCCAAGGAAAGGT TCAAATAAATCTATTGGCAGAATAATTCCCGGTGAAGAGTCTGACACTGAATATGCAGATCCTGAAACTGAGGGGGATGA TGTAGATGAAGATGATGATGAGTTCATGAAAAGAGTGAAGAAGACAAAAGTTGAGAAGCTTTCTATTGTTGACCACTCAA AGATTGACTATATACCATTCAGAAAGAATTTTTATATTGAAGTGAGAGAGATCTCGAAGATGACTCCTGAAGAAGTTTCA GTATACAGGAAGCAGTTGGAGTTGAAGATACATGGGAAGGATGTGCCTAAGCCTGTAAAATCATGGAACCAGACTGGGCT GACTAGCAAAATTTTGGAGACAATAAAAAAACATAACTTCGAAAAGCCTATGTCTATTCAAGCTCAGGCGCTGCCTACAA TTATGAGTGGTCGAGATTGCATAGGTATTGCTAAAACTGGGTCAGGTAAAACACTTGCTTTTGTTCTGCCAATGTTGAGG CATATCAAGGATCAGCCGCCAGTTGTTGCAGGGGATGGACCTATTGGGCTTATCATGGCTCCTACAAGGGAACTTGTTCA ACAGATTCACAGTGATATAAAGAAGTTTACTAAGGTACTGGGTATCAGGTGCGTGCCTGTCTATGGTGGTTCAGGTGTTG CTCAACAAATCAGTGAGTTGAAACGTGGTACTGAGATAGTGGTTTGTACTCCAGGTAGGATGATTGATATACTATGCACC AGTAGTGGGAAAATAACTAACCTGCGGAGAGTCACTTATTTGGTTATGGATGAGGCTGATCGAATGTTTGACATGGGCTT TGAACCTCAAATCACACGAATTGTTCAGAATATTCGGCCAGATCGTCAAACAGTTCTCTTCTCTGCTACTTTCCCCCGCC AGGTTGAAATTCTGGCACGCAAGGTTTTGAATAAACCTGTAGAAATACAAGTTGGCGGGAGAAGTGTTGTGAACAAAGAC ATATCACAGCTAGTTGAGGTGAGGCCAGAAAATGAGAGGTTCTTTAGACTCTTAGAAATACTGGGCGAATGGTATGAGAA AGGAAAGATCTTGATATTTGTCCATTCACAGGAGAAATGTGATTCTTTGTTCAAGGATCTGCTCAGGCACGGTTACCCAT GTCTTTCTCTTCACGGGGCTAAGGATCAGACAGACCGTGAATCCACAATTTCTGATTTTAAAAGCAATGTCTGCAATTTG TTGGTTGCAACAAGTATTGCTGCCCGGGGATTAGATGTCAAGGAGCTCGAATTGGTGATCAATTATGATGTTTCAAACCA CTATGAAGATTATGTACATCGTGTTGGGCGCACTGGCCGAGCTGGCCGTAAGGGTTGTGCCATTACATTTATTTCTGAGG AAGAGGCAAAATATGCACCAGATCTGGTGAAAGCCTTGGAGCTATCTGAGCAGACTGTTCCCGATGATCTGAAAGCTCTT GCTGATAGCTTTATGGCGAAAGTCAATCAAGGACTGGAGCAAGCGCATGGGACTGGTTATGGAGGAAGTGGCTTTAAGTT TAATGAAGAGGAAGATGAGGTGAGGAAAGCAGCAAAGAAAGCGCAAGCCAAAGAATATGGGTTTGAAGAAGACAAGTCAG ATTCTGAAGATGAAGATGATGGTATTAGGAAGGCAGGTGATGTCTCACAGCATCCTGCTCTTGCTCAGTTTCTTGCTGCC TCAAAAGTGAATACTTCTGTGATGCACACTCCCATCTCAGCTGCCCAGCTCATTCCAAATGGTGGACTACCTGTTCCTTT GCCAATTCTCCCGACTTCAACAGTCTTGCCTGGGACAGGGCTACCCCTTGCTACAACTGATGGGGCAGCTCGAGCAGCAT TAGCTGCTATAAACCTGCAGCACAACTTGGCAAAAATACAATCTGAAGCATTGCCAGAGCATTACGAGGCTGAGTTGGAA ATAAATGATTTCCCCCAGAATGCTCGCTGGAAAGTCACACACAAGGAAACCTTAGGCCCCATTTCTGAATGGACTGGAGC TGCCATTACCACCAGGGGGCAGTTTGTCAACCCTGGCAAAATCCCAGGACCTGGGGAACGCAAGCTCTACTTGTTCATTG AGGGTCCTAGTGAGCAATCAGTTAAGAGAGCCAAAACAGAATTGAAGCGTGTTTTGGAAGACATCACAAACCAGGCTTTG CAACTTCCTGGTGGATCTCAACCAGGCAAATACTCTGTCGTATAA
Protein sequence (LotjaGi1g1v0079500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEEVKHKSRKEDYEVKESETKRSHRDRDRERVRKERSEGRHRDREKRDRESRRHEREKSTDSEDRDREKKRKDKDKSKDK EREKGRDKKRDRDREDKERERAERAREKERERERKEEKERIREKEREREREKEKERRDHEREKEKERERERGRRVRDREK HRDDDSEHSDSEPRERDRKRHRKEDDGYKGRERERSSGKSNRKTEELEASPRKKSDGDDSDTKEKEIKPTREEEMEDEQR RLDDEMEKRRRRVQEWQELRRKKEEAEREKGGEASAIELESGKTWTLEGESDDEDGTGTGKLNTDMDVDEDDKSADKEPG DSMVVDVDNGAVASDLQNGAADASPDEEIDPLDAFMNSMVLPEVEKLNNAVTSSFVDKAADLNPKDKGDERSSSAHPRKG SNKSIGRIIPGEESDTEYADPETEGDDVDEDDDEFMKRVKKTKVEKLSIVDHSKIDYIPFRKNFYIEVREISKMTPEEVS VYRKQLELKIHGKDVPKPVKSWNQTGLTSKILETIKKHNFEKPMSIQAQALPTIMSGRDCIGIAKTGSGKTLAFVLPMLR HIKDQPPVVAGDGPIGLIMAPTRELVQQIHSDIKKFTKVLGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCT SSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKD ISQLVEVRPENERFFRLLEILGEWYEKGKILIFVHSQEKCDSLFKDLLRHGYPCLSLHGAKDQTDRESTISDFKSNVCNL LVATSIAARGLDVKELELVINYDVSNHYEDYVHRVGRTGRAGRKGCAITFISEEEAKYAPDLVKALELSEQTVPDDLKAL ADSFMAKVNQGLEQAHGTGYGGSGFKFNEEEDEVRKAAKKAQAKEYGFEEDKSDSEDEDDGIRKAGDVSQHPALAQFLAA SKVNTSVMHTPISAAQLIPNGGLPVPLPILPTSTVLPGTGLPLATTDGAARAALAAINLQHNLAKIQSEALPEHYEAELE INDFPQNARWKVTHKETLGPISEWTGAAITTRGQFVNPGKIPGPGERKLYLFIEGPSEQSVKRAKTELKRVLEDITNQAL QLPGGSQPGKYSVV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
MobiDBLite | 1 | 349 | 349 | - | – | |
MobiDBLite | 1 | 276 | 276 | - | – | |
Coils | 88 | 150 | 63 | - | – | |
Coils | 232 | 269 | 38 | - | – | |
MobiDBLite | 285 | 323 | 39 | - | – | |
PANTHER | 328 | 1133 | 806 | 3.1E-284 | – | |
PANTHER | 328 | 1133 | 806 | 3.1E-284 | – | |
MobiDBLite | 378 | 433 | 56 | - | – | |
MobiDBLite | 380 | 397 | 18 | - | – | |
MobiDBLite | 415 | 432 | 18 | - | – | |
Gene3D | 453 | 709 | 257 | 6.4E-86 | – | |
SUPERFAMILY | 483 | 711 | 229 | 7.7E-71 | ||
CDD | 489 | 710 | 222 | 8.0952E-156 | – | |
ProSiteProfiles | 500 | 528 | 29 | 9.649 | ||
SMART | 519 | 724 | 206 | 5.7E-61 | ||
Pfam | 525 | 696 | 172 | 7.0E-49 | ||
ProSiteProfiles | 531 | 709 | 179 | 32.987 | ||
SUPERFAMILY | 647 | 882 | 236 | 1.36E-54 | ||
ProSitePatterns | 655 | 663 | 9 | - | ||
Gene3D | 710 | 885 | 176 | 2.6E-51 | – | |
ProSiteProfiles | 720 | 881 | 162 | 22.733 | ||
CDD | 721 | 851 | 131 | 9.47635E-55 | – | |
Pfam | 737 | 842 | 106 | 1.4E-26 | ||
SMART | 761 | 842 | 82 | 2.5E-27 | ||
MobiDBLite | 916 | 945 | 30 | - | – | |
MobiDBLite | 916 | 930 | 15 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
Expression pattern of LotjaGi1g1v0079500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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