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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0088100 |
| Transcript ID | LotjaGi1g1v0088100.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pumilio, putative; TAIR: AT2G29200.1 pumilio 1; Swiss-Prot: sp|Q9ZW07|PUM1_ARATH Pumilio homolog 1; TrEMBL-Plants: tr|V7B957|V7B957_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0088100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:12777645..12786914) extracted from Lotus japonicus Gifu genome v1.2.
ACGCCACAGTGTTAATAAGACATAATATAAACCCTAATGCCGAATGTAATAACAAATCTTCCAAAACTCAATCTCCACCG TTGATTCTAATCCAACGGTTCACAAGGTGAAGGGCTTGTGCTTATCACTGCCTACACTCCTCACCATCTTCTCACTCTCG CACACTCTGCCCACTGTTTCTGTTTCTCTCCTAACATGGTCGACCCTCCACATTCATCTTCATCACTCTGATCCTCATTT CAATTCCGACCCATTATCTCAATCATCATCCCCATCAATAAAAACTCTGCTTTTTCCAACTTCACTGCTTAATTCTCAAC TGGGTCGGTGGAGTTTTTTTCTGGGGTGTGTTTGAAAACTGGTTTTGAAAGCAAAGGTTTGAGGTTTTGTCGTAGTGTGA GTGATTGTTTCGTTTTTGTTTCTGGTTTTTTTGGTTGTTGTGTTCACTGAGTTTTGAGTTTTGAGTGGAGTTTTGTGTAA TCTAATGGTTAGTGATAGCTACTCGTCGAAGAAGATGTCTGATGTGGCGATTCGATCGATGATGAAGAACGGTGATTTCG GCGAGGATTTGGCGGCGCTGAGGCGGCAGCAGGTGGAGGCGAATGAGAGGGAGAGAGAACTCGCGATGCTGCGAAGTGGG TCGGCGCCTCCTACGGTGGATGGTTCGTTGACGGCGGTTGGAGGGCTGTACGGTGGTTCTGGTGGCGGCGGAAGGTATTT TGGGAATGAGGATGAGATTCGTGCTGATCCGGGGTATGCTGATTATTACTACTCGAGCGCGAATCTGAACCCGCGGTTGC CGCCGCCTCTGGTGTCGAAGGAGGATTGGCGGTTCGCGCAGCAGATGAAGGGTGGCTCGAAGGTTGGAGGGATCGGGGAT CGGAGGACATTGAGTGGAAGGGTGTATGATGATGGTGGTAATGGAGACATGTCACTGTTTTCTATGCAGCAGCGTGCTGG GTTTAATAAGGATGATGGTGGTTTGAAGCAGCAGCAGCGGAGGAGCGCCGCCGAGTGGGCCGGCGGCAACGATGGCTTGA TCGGCTTGCCGGCATTGGGGCTTGGAAGGAGGCAGAGGAGCATTGCAGAGGTATGTCAGGTGAGAATTAAGCCAATTATT TCTTTGTGTTTTAAATTTGAAATTTTTATGTTTCTATGTTTATAGGTTTATTTCCATTCTTTATAATGATTGATTGTTTG GTGCTGATTGAAGAGTTTGACGTGCAAGGTTTGGAAGTATATTTATGTGCAGAGTTTTAAATTGTGGCGCGAAATTCCGT TGTGGCGCGAAATTGCAGCGCGGTAACGGTCGTGGTCTTGGTTGCGTTGCGGCCATTTGTATTGCTGAAAATTGTGGCTG TCGCAGCTGAAATCACAATTGCGTTACGATACGATTCAGAAACACGGTCGCGGACCTTGATTTAAAACAATGATTAGGAG TGGCTTTGTTCTCCTAGGATGGAAAATAATGTGTAACATTTTTGTCTACTTTATCTATTCTTCATGGACTATAGCCATGA GATTTCTAGATGATTAATTTATTAATCTTGTTTTCTGACTGATAGATGACCTGTCTATGCACATGTTTTTGTGGATTTTG AAACAATGTTGTTAATCGCGGATCGCAGCGGAAGGCCAGAAATCCGCTATGTCAAGCCCTCAAAGCGGAAAATAGCGGAG AATGGCGGATAGCGGTGAACCCTCAGAGCGCTACGCTATAGCGCCGCGATATCCGCTATTTGACAACACTGCTTTGAAAT CACTCGGGCATGATCACCACATTTCTTGTTTAGCTTTTAATATTCAATTTTCCTAACCAGTTTTGATGTTCTAATTTAAG CTAAATTCGAAGAATTTGCAGACCAAATTTGAAGATACATTTCTCTCTGTTTGAAATTTCTTATTCATGTGTTATTTTTG CAATGAAGTGATGTTATTGTATTTATATTTTTATAGTGATCATGAACTGAGAATTTTGATTACCTTGTCATATTTTCTGT TACTCTTCACTTATCATATTATCATTATATTTAGTTATGTTGCATCTGATGTTTTCTTTGTCATATTTTTGAAGCAGGGC GAGATGAATGGTGCAACATCGGCCTCCCAGCAGCCACATCATCTGCCTGTCGGTAATGTGTTTGATGATATTCCTGGAAA ATCGGAGTCCCATTATGCTTATCTGCAGCAAGAATTGGATGCTTTGCAGTCCGGTGGAAATAAGCGGGGCATATCCGGTG CCCAAAATCTTTTCGGTTCAGCATCTCAATCTTATGCTTCTGCTTTAGGAGCCTCGCTGTCGAGGAGCAGCACCCCTGAC ACTCAACTTCTACCTAGAGCTGCTAGTCCTTGCCTTCCACCAATTGGGGATGGGAGGTCCGGCTCCGTAGATAAAAGAAG TTCCAATGGCCAAAACTCATTTAATGGCATCTCATCTAATTTAAATGAGCCTTCTGATTTGGTATCTGCTTTGGCTGGCA TGAATCTGTCCCAAAATGATGTAATAGATGATGAGAAACATCCCCAGTCACCGAGGCACAATGAATCTGACTATACTCAT GATGTTAAACAGCATGCATACTTAAACAGGTCTGATTCTTTGCCTTTTCAGCGTTCTGCTGCTACCCAACCCTATTTAAA AGCTAGTAGAAGTAGCGGTTTTGGATTGGATCTGAATAACTCATCGTTGTATGCAAACGAACTGCTAGAATCTCATAGGG TTGGTGGAGTTTCTGTTAACTCACACTTGAAAGGACCTTCTACACCAAATTTTACTAGCAGAGGTAATTCAGCTGCTCAC TATCCGAATCTTGATGACTTGAGTATTCCGTATGCTAACTATGGCATGGCTGGGTACGCCAACAATCCGTCATCACCATC CATGATGGCAGGCCAGCTTGGGAACGGTAACTTGCCTCATTTCTATGAACATGCTGCTGCTTTGCCCGCACTAGGAGTGA ATGCCATGGACTCTAGAGCCTTGGGAAGAGGTGCAACTTTAGGACCTTTGATGGCTGCGTCGGAGTTACAGAATGCGAGA GGGTTTGGAAGTCATGGAGCAGGTAGCACTCATCAGATGCCCTTGATGGATCCTTTGTATCTTCAATACCTGAGATCAGG GGAAGTTTCTTCTGCACAGCTTGCAGCCCTAAATGAATCGGCAATAAATAGGGAATACTTGAATGCTTCATTTAGAGATT TAGCTAGCCTCCAGAAAGCTTATTTGGAGTCTTTAATTGTCCCCCAAAAATCGCACTTTGGTGCCCCCTACCTTGGTAAG TCAGCCAGCTTGAGCCCTAATTCTGGCAGAAATCCATCATATGGTCTCGGTATGACATATCCAGGAAGTCCACTGGCTGG TTCTGTTTACCCAAACTCCTTCTATGGACCCAGTAGTCCTATGAGCCAAAGTGAACGGAATATGCGGTTGTCTGGAATGA GGAATGTGGCTGGCAGTGTCATGGGAGCTTGGCAAGCGAACACTGTTGGAAGTTTGGATGAGAATTTTCCATCTTCCTTG CTCGATGAGTTCAAAAGCAACAAAACCAAATGCTTTGAACTTGCAGAAATTGCTGGCCATGTTGTTGACTTCAGGTGCAT AATGCTTGTCATACACTCATACTATGTTTTGCTTTTTGACTCTGAACATTTAGCTAACTCATGTTTGTATATTACAGTTC TGACCAGTATGGAAGCCGTTTTATCCAACAGAAACTTGAGACAGCCACAATGGACGAGAAAAATATGGTTTTCCATGAAA TCATGCCACAGGCTCTTTCTCTGATGACTGATGTCTTTGGTAATTATGTGATTCAGAAGGTATTTATGTTCTTGACTTTG GACTTGTATCACATTTTTGTGGTTAGTATGTTCAAGTGGGTAGCGAAGCGAATTCATTACATAAAGCTAAAAAATTCTAT CTTGTTCTATACATGCCTAACTTATTCGGTATCATGTTTAGTTTTTTGAGCATGGAACGCCGGCGCAGATAAGAGAACTG GCTGACCAACTTACCAGTCATGTGCTGACCCTAAGTCTTCAAATGTATGGCTGCCGAGTTATCCAGAAGGTCTGCTCATC ACTTTTTCCTACCTTATGATTGTTATTTGTTACCATACCATAATCGTACCCTGTTTATGTGTGTTTTACAATTTTTTACT GTTCTTTATGGAGCATTGTAGTTTATTAACAGAGTAGTGTGTCAATGTTGTGGCCTCTGGTCACTAAGGTCGGCATAGCA TTACATTTTTCCATCATGGCAATAGCGGCTAAGATTGCAGTCAGTCATGTAGCGGCTGTGAGCCTGTGACAGCCATGGCA ATGGACAGGCCCCTCTCTTCTGACCAAATCCTGGCAGTTTCAATGCCAGCTTTTGGAGGGGCCTCTTTTGTACTGAGCTA ATGTCCGTTTTCCAAATCTGTATTTTTTTTAAATGGCCTAGCTGATTAGTGCTCTGAATGCCCTGGTTTATGTGCATTTA ATTGATTAATTCCTGCTATTAAATGTTTTGGATTGCTCAATGAAGAAACTCAAGAAAGCACAAGTTTTTTTTTTTTTGAA ATATCAATGTAATTAATATATTGTTTTTCATAATAACTTTTATTTGTTTCCTTAACACGTTTAGGACACTCATCATGAAG CACGGAAACCTGTCTTGAAAGGAGTGTCCCGGTGTTGATACGACTTGTCGACCTCGACACCCGTACTTCACGTGTCAAAC ACCTTTTCGCAGTGTTTGAGCAAATTTTTCTTTTTCTTTTTCTTTTTGAAAAGGTGGATATACACACACACACACGGTGT CCCAATGTCCTACTTTTGGGATGTTAGTCGTATCACGGTGTCCATGTCGTGTCCGGGTTGGTGTCAAAGTCGGTGCTTCA TAGCTCTTCGACAATTCCTTATTTTAAAAACATTTTGTTCATAGAGTACAACATATTCAGCGAAAAAGGACATTAACCAT CCTACTCTTTTGGTAATTCCAGTCATTGTCCCTCTTTATCATTGTTTCTTTTTTCTTTTATTTATGTATATTTGGGTGTG CTTTCAATACTTGTTGTTAGCAACTCAAAATTTTCATGATTACTAATATGAATGGTGCTTTTTTAAAATATTATTATTAA AAAAATTGGAAGTGTTGATTATGAGACACGGTACACATTTTAAAACGACCAGTGTTATTAGTTGAGTATATGTCTTATTT TTTATTACTTTTTGAGTTTTGAGCATTTATTTGTACTATAAATTATTTGTAATGTATAAGCTACCTTTTGTATAGTGGTA GTTCTTTCATGTGCTACAAGTTTCTGCCTTTCCAGCATTAACTACTATGGTATGCCATGTAAAAATTAGGTGTGTAAAGC AATTCTTTTCATTTTATTTTTGTCTACGTGGAAAGGTGAGGAACATATCGCACCAAAATTCCACAAAAGTGTGTCTACAT GTGTGTGCGCATTTGTTCATTTATTTTGAGACTGATATTTTGACATATTATTATGGTGTGAGTGATAAGTGCTGCTCTGA TTAGTGTGGGTTGATGGTAAACTTAACAGTTATTCATCTTGTTTTTTGTTCTAAATTGTCCAGGCAATAGAAGTTGTTGG TTTAGATCAGCAGACTCAAATGGTTGCAGAACTGGATGGTCATATCATGCGTTGTGTTCGTGATCAAAATGGGAACCATG TCATCCAGAAGTGTATTGAATGTGTACCTGAGGATTCAATCCAATTCATTGTGTCGACTTTTTATGACCAAGTTGTGACA CTGTCAACTCATCCATATGGTTGCCGAGTTATACAGGTCACAAATGCATCTTTTGCTTTAATTTGTGTAAACACGTATTT GCTTGATTAGTAGCTTGCGAGATAGACATTATAATTCTAAAATTGACGTTTCTATAAGCAGAGAGTCTTGGAGTACTGCC ATGATCCCAAAACGCAGCAGATTATGATGGATGAGATTTTGCAGTCTGTCTGCATGTTAGCACAAGACCAATATGGGAAT TATGTTGTACAGGTTTGTTATATCTCATTTCGTTTTTTTTGCTTTTTACAAGTTGTGATTTTATTTTCTACATGTTGGCA GTAGTCCCATGCTCTTTTGCTAAGTATTATCGTGATCAATTATGGCCAATCGGTATCATAAATCATTGAGTATGTGAAAC ATTGAATTAATTGTGAAATCCCTTGATTTAAAAGCTAATGATAGTAACATTTTGTCTGTACTGGAATTGAGCAAGGTTGA TATTGAAATGCTTGAGGTACGGTGGCTCTAACTGTGTTCTATTTTGCAATTCTGATAGTCTAATATTTTATAAAATGGAT GGTAAATATACCTGCGTGGCTTTGTGGCTTAACTGCTGGCACTTCATAGGTTCTTTACTTTTTCTAGCCTTAGTTTTCGC AATTGAGATACTAGTGAGCTTATGTGGTGTTAATTCGTAACTTGTGTTGTGCTTTGAGTTTTTTTGTTGGATGATTTTTT TATTGCCTCTTTAGATTTAGCGCATTTGCGTTAGTCAGTGATCATTGTTTAAACATTTCAGCATGTGCTGGAGCATGGCA AGCCACATGAGCGTTCGGCTATAATAAAAGAATTAACTGGGCAAATAGTGCAGATGAGCCAGCAGAAGTTTGCCTCCAAT GTCATAGAGAAGTGTCTATCATTTGGAACACCTGCAGAGCGTCAATTCCTTGTAAATGAGATGCTTGGTTCTACTGATGA AAATGAGCCCCTACAGGTTTGTGCATGACCTATTTAGAATCTACAATGACAAAACAATTTATAAGATGATGGTTTCTTCA GTTTTGTTATCACAGCTCAATCGTATTGTTGAAAATTATTTGGCTTATCTTTTCACATCATTGTTTTCCTTCTTGGAATC TAATCTTGGCTTGCTGTATGCACAAAGATTAGAAGATACGACTATACATGGGCAAAACTTGACTAAGTTTTCTAAATCCA TTATTAAGTTCTCCTTTCAAATAATGACACATGGATAATTTTTTAAACTCAGCAACATATTCTTGATGGAGGCCATTTCA TGTTGGAAATAAAAACCATTGTGTCATTGTTTGGGTGGAAAACTTGATAGCAAAGATACACGGAATTTATGTAAGTTTTT TCCACTATATTACAGATTGTAGGGAGATATCCATTTAATGCTCTTCATGTTTATTTCTAGAGTTTGAAGATGGTTGAAAT TTTTTATAATAATTAAATTTGCTTTTAGTTGTTAGAACTTACAAGTTAAGCCATTCATATTGTATCAGTTAATGTCCGGT AGGGGTATAAATAGGTTAGGCCACTCATCGGGTGCCTATAGGCTATATAGCCTACTAAACAACTCAGCTCAAGGTTTTTT TAAAAGCTTTATTTAGCTAAGAAGGTTAGACTTGGCCATTCAAAAATCCTTTTCGGCTGAACAGACTAGCCTATTTAAGT TAGGAGTTAGCTCTTATTTCCAATAAAAAAACTAGATCTGGCTTAAGTTAGGTACTGTCATTCCTTTTGTTTTATTACTT GACGTTTTCTTACAATTTGCTTGTGTTTTCTTGGTTTTAGGCTATGATGAAGGATCAGTTTGCAAATTATGTTGTACAGA AAGTGTTGGAAACCTGTGATGACCAGCAGCTGGAGCTAATCCTTAATCGAATTAAGGTTCACCTGAATGCCTTGAAGAAG TATACTTATGGGAAGCACATTGTTGCTCGTGTAGAGAAATTGGTTGCTGCTGGAGGTACTTTCAATCTCATAAATTTACT CTTCCATTTGACTCGTAGGTTACATTTCTTACAATTTTCTCAACATGGATTTTTTATAGTGTATTCATGAAATCAGTATG CAATGATTTGGTTTCCATTCTTAAAGTGCTGTATGTTCAACTTTAATTTAATAGCTGAGTTCCCTTTAAATTCATCCATG GTCTCACTTGACATTTTTCACAAATTATTTGTGTACATCGAAAAACAAAAATTGAAAAAAAGGTTTCCTTTCCATTGAAC CATGAAATTTGATTATTTGCTATTTTATTCACAACTAGCATCATGATGTAGAATTATCTGTCAGTCTGGTAATGTTTAGC AAATGAAGAGTCATTCTCATTACTGCTGTGCATGATGAATGATTTTAATTTTTCATGCCATGCCAAAGGATGCGTCTAAA CTCTAAATCTCTTTAGTTACCAGTTTGTAGAATAGTTTAGTTCATAAAAGCAGAAAACTAAGAAAACTCGTTTGATATCT TTTAGTTTTTAAAATCTGTTCTTATTGCATTTTTAAAACTGAAATCACAAAACATCATCCCGCAGATGTTTTATGTTTCC ATTTAGAGTTCAAGACACATGTCTGTCAACTTTGAAAAACATATCGCTCAAACAGTTTTGCTCTCTTTCTTCTTCTGAAA AACATGTTTTTAAAAATTGTTTCTGAAAATAGTTTTTAAATTTAGAAAACTGAGAAGAGAATCAAACAAGCTTTTAAGGT TTTGTTTAAGCTGGATGATGAAGTTTCATGAAGTGACTTATAGAGTTTCTTTGAATGTTTCATTATGTGTATATAACTAA TAAAATGCTTGATTTCATGTTATGCAGAGAGGAGGATTAGCTTTCTGACCCTAAATCCTGCACAGGTGGTATAGGAAATG AAGTTATGTACAGCTAACTGAGGGTAATAAGCAACTGCTTGCTTTTTCTTCTCTCCTTGATTGGAATTAATTAATAAATT GTTAGTTGTACTTGAAACTGTACATTTGTTAGTTTGAGGATATACCTAGAATCAGTTTAGCTGAGGAGGCGAAGGCTCAG GTTCAGTCGGTAAATTATGCCTGATGCGCTTGCGGCATAGATATATTTATGAGCTAGTTTTAATGTTGTACAGAGAGGTC TTGACTGTACAAATTTCCCTAGGTTGGTTATGGGAGCACTTGTATTCCGGATGCAAACATGTTTTTGAGGATTTTCTTTA TGAGGATGCTCTTTGGATAATCTTTGTTGTTGTTTTGTTTCCCGCATTTTTGCCTCTTGCTTGAAAAAATCGCTATGCTT GATGCATGTTTGAAAATTCGGTTACAATTGATTCTAAAGTCGGAATCAATTTTCAAGTGAAGCTTCTATTTTCGGGAGAA GCTTTGTTAGTAGCTCTTGTATAAGCTCTTTAGTAGTCAGAATCAATGTTTTGAAACTTCATAGTCGGGAAAAATAAGCT GAAAAAAGGGAGTTTTCTATCGTGGCTTATAAAATTTGTTTACGTTTTTCTAAATCACTTTTGAAAATTT
CDS sequence (LotjaGi1g1v0088100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTAGTGATAGCTACTCGTCGAAGAAGATGTCTGATGTGGCGATTCGATCGATGATGAAGAACGGTGATTTCGGCGA GGATTTGGCGGCGCTGAGGCGGCAGCAGGTGGAGGCGAATGAGAGGGAGAGAGAACTCGCGATGCTGCGAAGTGGGTCGG CGCCTCCTACGGTGGATGGTTCGTTGACGGCGGTTGGAGGGCTGTACGGTGGTTCTGGTGGCGGCGGAAGGTATTTTGGG AATGAGGATGAGATTCGTGCTGATCCGGGGTATGCTGATTATTACTACTCGAGCGCGAATCTGAACCCGCGGTTGCCGCC GCCTCTGGTGTCGAAGGAGGATTGGCGGTTCGCGCAGCAGATGAAGGGTGGCTCGAAGGTTGGAGGGATCGGGGATCGGA GGACATTGAGTGGAAGGGTGTATGATGATGGTGGTAATGGAGACATGTCACTGTTTTCTATGCAGCAGCGTGCTGGGTTT AATAAGGATGATGGTGGTTTGAAGCAGCAGCAGCGGAGGAGCGCCGCCGAGTGGGCCGGCGGCAACGATGGCTTGATCGG CTTGCCGGCATTGGGGCTTGGAAGGAGGCAGAGGAGCATTGCAGAGGTATGTCAGGGCGAGATGAATGGTGCAACATCGG CCTCCCAGCAGCCACATCATCTGCCTGTCGGTAATGTGTTTGATGATATTCCTGGAAAATCGGAGTCCCATTATGCTTAT CTGCAGCAAGAATTGGATGCTTTGCAGTCCGGTGGAAATAAGCGGGGCATATCCGGTGCCCAAAATCTTTTCGGTTCAGC ATCTCAATCTTATGCTTCTGCTTTAGGAGCCTCGCTGTCGAGGAGCAGCACCCCTGACACTCAACTTCTACCTAGAGCTG CTAGTCCTTGCCTTCCACCAATTGGGGATGGGAGGTCCGGCTCCGTAGATAAAAGAAGTTCCAATGGCCAAAACTCATTT AATGGCATCTCATCTAATTTAAATGAGCCTTCTGATTTGGTATCTGCTTTGGCTGGCATGAATCTGTCCCAAAATGATGT AATAGATGATGAGAAACATCCCCAGTCACCGAGGCACAATGAATCTGACTATACTCATGATGTTAAACAGCATGCATACT TAAACAGGTCTGATTCTTTGCCTTTTCAGCGTTCTGCTGCTACCCAACCCTATTTAAAAGCTAGTAGAAGTAGCGGTTTT GGATTGGATCTGAATAACTCATCGTTGTATGCAAACGAACTGCTAGAATCTCATAGGGTTGGTGGAGTTTCTGTTAACTC ACACTTGAAAGGACCTTCTACACCAAATTTTACTAGCAGAGGTAATTCAGCTGCTCACTATCCGAATCTTGATGACTTGA GTATTCCGTATGCTAACTATGGCATGGCTGGGTACGCCAACAATCCGTCATCACCATCCATGATGGCAGGCCAGCTTGGG AACGGTAACTTGCCTCATTTCTATGAACATGCTGCTGCTTTGCCCGCACTAGGAGTGAATGCCATGGACTCTAGAGCCTT GGGAAGAGGTGCAACTTTAGGACCTTTGATGGCTGCGTCGGAGTTACAGAATGCGAGAGGGTTTGGAAGTCATGGAGCAG GTAGCACTCATCAGATGCCCTTGATGGATCCTTTGTATCTTCAATACCTGAGATCAGGGGAAGTTTCTTCTGCACAGCTT GCAGCCCTAAATGAATCGGCAATAAATAGGGAATACTTGAATGCTTCATTTAGAGATTTAGCTAGCCTCCAGAAAGCTTA TTTGGAGTCTTTAATTGTCCCCCAAAAATCGCACTTTGGTGCCCCCTACCTTGGTAAGTCAGCCAGCTTGAGCCCTAATT CTGGCAGAAATCCATCATATGGTCTCGGTATGACATATCCAGGAAGTCCACTGGCTGGTTCTGTTTACCCAAACTCCTTC TATGGACCCAGTAGTCCTATGAGCCAAAGTGAACGGAATATGCGGTTGTCTGGAATGAGGAATGTGGCTGGCAGTGTCAT GGGAGCTTGGCAAGCGAACACTGTTGGAAGTTTGGATGAGAATTTTCCATCTTCCTTGCTCGATGAGTTCAAAAGCAACA AAACCAAATGCTTTGAACTTGCAGAAATTGCTGGCCATGTTGTTGACTTCAGTTCTGACCAGTATGGAAGCCGTTTTATC CAACAGAAACTTGAGACAGCCACAATGGACGAGAAAAATATGGTTTTCCATGAAATCATGCCACAGGCTCTTTCTCTGAT GACTGATGTCTTTGGTAATTATGTGATTCAGAAGTTTTTTGAGCATGGAACGCCGGCGCAGATAAGAGAACTGGCTGACC AACTTACCAGTCATGTGCTGACCCTAAGTCTTCAAATGTATGGCTGCCGAGTTATCCAGAAGGCAATAGAAGTTGTTGGT TTAGATCAGCAGACTCAAATGGTTGCAGAACTGGATGGTCATATCATGCGTTGTGTTCGTGATCAAAATGGGAACCATGT CATCCAGAAGTGTATTGAATGTGTACCTGAGGATTCAATCCAATTCATTGTGTCGACTTTTTATGACCAAGTTGTGACAC TGTCAACTCATCCATATGGTTGCCGAGTTATACAGAGAGTCTTGGAGTACTGCCATGATCCCAAAACGCAGCAGATTATG ATGGATGAGATTTTGCAGTCTGTCTGCATGTTAGCACAAGACCAATATGGGAATTATGTTGTACAGCATGTGCTGGAGCA TGGCAAGCCACATGAGCGTTCGGCTATAATAAAAGAATTAACTGGGCAAATAGTGCAGATGAGCCAGCAGAAGTTTGCCT CCAATGTCATAGAGAAGTGTCTATCATTTGGAACACCTGCAGAGCGTCAATTCCTTGTAAATGAGATGCTTGGTTCTACT GATGAAAATGAGCCCCTACAGGCTATGATGAAGGATCAGTTTGCAAATTATGTTGTACAGAAAGTGTTGGAAACCTGTGA TGACCAGCAGCTGGAGCTAATCCTTAATCGAATTAAGGTTCACCTGAATGCCTTGAAGAAGTATACTTATGGGAAGCACA TTGTTGCTCGTGTAGAGAAATTGGTTGCTGCTGGAGAGAGGAGGATTAGCTTTCTGACCCTAAATCCTGCACAGGTGGTA TAG
Protein sequence (LotjaGi1g1v0088100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVSDSYSSKKMSDVAIRSMMKNGDFGEDLAALRRQQVEANERERELAMLRSGSAPPTVDGSLTAVGGLYGGSGGGGRYFG NEDEIRADPGYADYYYSSANLNPRLPPPLVSKEDWRFAQQMKGGSKVGGIGDRRTLSGRVYDDGGNGDMSLFSMQQRAGF NKDDGGLKQQQRRSAAEWAGGNDGLIGLPALGLGRRQRSIAEVCQGEMNGATSASQQPHHLPVGNVFDDIPGKSESHYAY LQQELDALQSGGNKRGISGAQNLFGSASQSYASALGASLSRSSTPDTQLLPRAASPCLPPIGDGRSGSVDKRSSNGQNSF NGISSNLNEPSDLVSALAGMNLSQNDVIDDEKHPQSPRHNESDYTHDVKQHAYLNRSDSLPFQRSAATQPYLKASRSSGF GLDLNNSSLYANELLESHRVGGVSVNSHLKGPSTPNFTSRGNSAAHYPNLDDLSIPYANYGMAGYANNPSSPSMMAGQLG NGNLPHFYEHAAALPALGVNAMDSRALGRGATLGPLMAASELQNARGFGSHGAGSTHQMPLMDPLYLQYLRSGEVSSAQL AALNESAINREYLNASFRDLASLQKAYLESLIVPQKSHFGAPYLGKSASLSPNSGRNPSYGLGMTYPGSPLAGSVYPNSF YGPSSPMSQSERNMRLSGMRNVAGSVMGAWQANTVGSLDENFPSSLLDEFKSNKTKCFELAEIAGHVVDFSSDQYGSRFI QQKLETATMDEKNMVFHEIMPQALSLMTDVFGNYVIQKFFEHGTPAQIRELADQLTSHVLTLSLQMYGCRVIQKAIEVVG LDQQTQMVAELDGHIMRCVRDQNGNHVIQKCIECVPEDSIQFIVSTFYDQVVTLSTHPYGCRVIQRVLEYCHDPKTQQIM MDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSAIIKELTGQIVQMSQQKFASNVIEKCLSFGTPAERQFLVNEMLGST DENEPLQAMMKDQFANYVVQKVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEKLVAAGERRISFLTLNPAQVV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 32 | 1030 | 999 | 0.0 | – | |
| PANTHER | 32 | 1030 | 999 | 0.0 | – | |
| MobiDBLite | 279 | 327 | 49 | - | – | |
| Pfam | 292 | 700 | 409 | 4.9E-108 | ||
| MobiDBLite | 308 | 327 | 20 | - | – | |
| ProSiteProfiles | 682 | 1022 | 341 | 131.577 | ||
| Gene3D | 682 | 1027 | 346 | 4.4E-141 | ||
| SUPERFAMILY | 685 | 1019 | 335 | 4.17E-118 | ||
| ProSiteProfiles | 702 | 737 | 36 | 10.997 | ||
| SMART | 702 | 737 | 36 | 9.8E-6 | ||
| CDD | 703 | 1018 | 316 | 8.44743E-175 | ||
| Pfam | 703 | 729 | 27 | 1.8E-5 | ||
| ProSiteProfiles | 738 | 773 | 36 | 10.46 | ||
| SMART | 738 | 773 | 36 | 6.6E-7 | ||
| Pfam | 741 | 770 | 30 | 8.8E-8 | ||
| ProSiteProfiles | 774 | 809 | 36 | 10.39 | ||
| SMART | 774 | 809 | 36 | 2.4E-6 | ||
| Pfam | 776 | 807 | 32 | 1.6E-5 | ||
| SMART | 810 | 845 | 36 | 1.3E-7 | ||
| ProSiteProfiles | 810 | 845 | 36 | 10.157 | ||
| Pfam | 812 | 842 | 31 | 1.0E-5 | ||
| ProSiteProfiles | 846 | 882 | 37 | 10.764 | ||
| SMART | 846 | 882 | 37 | 5.9E-7 | ||
| Pfam | 848 | 880 | 33 | 2.5E-8 | ||
| SMART | 883 | 918 | 36 | 1.3E-6 | ||
| ProSiteProfiles | 883 | 918 | 36 | 12.0 | ||
| Pfam | 884 | 914 | 31 | 4.5E-7 | ||
| SMART | 919 | 954 | 36 | 6.5E-8 | ||
| ProSiteProfiles | 919 | 954 | 36 | 10.04 | ||
| Pfam | 920 | 952 | 33 | 3.9E-5 | ||
| ProSiteProfiles | 955 | 996 | 42 | 9.807 | ||
| SMART | 961 | 996 | 36 | 8.6E-7 | ||
| Pfam | 969 | 995 | 27 | 8.5E-7 | ||
| ProSiteProfiles | 997 | 1033 | 37 | 4.674 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | RNA binding | Interacting selectively and non-covalently with an RNA molecule or a portion thereof. |
Expression pattern of LotjaGi1g1v0088100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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