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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0088100 |
| Transcript ID | LotjaGi1g1v0088100.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pumilio, putative; TAIR: AT2G29200.1 pumilio 1; Swiss-Prot: sp|Q9ZW07|PUM1_ARATH Pumilio homolog 1; TrEMBL-Plants: tr|V7B957|V7B957_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0088100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:12777935..12786748) extracted from Lotus japonicus Gifu genome v1.2.
CTGCCCACTGTTTCTGTTTCTCTCCTAACATGGTCGACCCTCCACATTCATCTTCATCACTCTGATCCTCATTTCAATTC CGACCCATTATCTCAATCATCATCCCCATCAATAAAAACTCTGCTTTTTCCAACTTCACTGCTTAATTCTCAACTGGGTC GGTGGAGTTTTTTTCTGGGGTGTGTTTGAAAACTGGTTTTGAAAGCAAAGGTTTGAGGTTTTGTCGTAGTGTGAGTGATT GTTTCGTTTTTGTTTCTGGTTTTTTTGGTTGTTGTGTTCACTGAGTTTTGAGTTTTGAGTGGAGTTTTGTGTAATCTAAT GGTTAGTGATAGCTACTCGTCGAAGAAGATGTCTGATGTGGCGATTCGATCGATGATGAAGAACGGTGATTTCGGCGAGG ATTTGGCGGCGCTGAGGCGGCAGCAGGTGGAGGCGAATGAGAGGGAGAGAGAACTCGCGATGCTGCGAAGTGGGTCGGCG CCTCCTACGGTGGATGGTTCGTTGACGGCGGTTGGAGGGCTGTACGGTGGTTCTGGTGGCGGCGGAAGGTATTTTGGGAA TGAGGATGAGATTCGTGCTGATCCGGGGTATGCTGATTATTACTACTCGAGCGCGAATCTGAACCCGCGGTTGCCGCCGC CTCTGGTGTCGAAGGAGGATTGGCGGTTCGCGCAGCAGATGAAGGGTGGCTCGAAGGTTGGAGGGATCGGGGATCGGAGG ACATTGAGTGGAAGGGTGTATGATGATGGTGGTAATGGAGACATGTCACTGTTTTCTATGCAGCAGCGTGCTGGGTTTAA TAAGGATGATGGTGGTTTGAAGCAGCAGCAGCGGAGGAGCGCCGCCGAGTGGGCCGGCGGCAACGATGGCTTGATCGGCT TGCCGGCATTGGGGCTTGGAAGGAGGCAGAGGAGCATTGCAGAGGTATGTCAGGTGAGAATTAAGCCAATTATTTCTTTG TGTTTTAAATTTGAAATTTTTATGTTTCTATGTTTATAGGTTTATTTCCATTCTTTATAATGATTGATTGTTTGGTGCTG ATTGAAGAGTTTGACGTGCAAGGTTTGGAAGTATATTTATGTGCAGAGTTTTAAATTGTGGCGCGAAATTCCGTTGTGGC GCGAAATTGCAGCGCGGTAACGGTCGTGGTCTTGGTTGCGTTGCGGCCATTTGTATTGCTGAAAATTGTGGCTGTCGCAG CTGAAATCACAATTGCGTTACGATACGATTCAGAAACACGGTCGCGGACCTTGATTTAAAACAATGATTAGGAGTGGCTT TGTTCTCCTAGGATGGAAAATAATGTGTAACATTTTTGTCTACTTTATCTATTCTTCATGGACTATAGCCATGAGATTTC TAGATGATTAATTTATTAATCTTGTTTTCTGACTGATAGATGACCTGTCTATGCACATGTTTTTGTGGATTTTGAAACAA TGTTGTTAATCGCGGATCGCAGCGGAAGGCCAGAAATCCGCTATGTCAAGCCCTCAAAGCGGAAAATAGCGGAGAATGGC GGATAGCGGTGAACCCTCAGAGCGCTACGCTATAGCGCCGCGATATCCGCTATTTGACAACACTGCTTTGAAATCACTCG GGCATGATCACCACATTTCTTGTTTAGCTTTTAATATTCAATTTTCCTAACCAGTTTTGATGTTCTAATTTAAGCTAAAT TCGAAGAATTTGCAGACCAAATTTGAAGATACATTTCTCTCTGTTTGAAATTTCTTATTCATGTGTTATTTTTGCAATGA AGTGATGTTATTGTATTTATATTTTTATAGTGATCATGAACTGAGAATTTTGATTACCTTGTCATATTTTCTGTTACTCT TCACTTATCATATTATCATTATATTTAGTTATGTTGCATCTGATGTTTTCTTTGTCATATTTTTGAAGCAGGGCGAGATG AATGGTGCAACATCGGCCTCCCAGCAGCCACATCATCTGCCTGTCGGTAATGTGTTTGATGATATTCCTGGAAAATCGGA GTCCCATTATGCTTATCTGCAGCAAGAATTGGATGCTTTGCAGTCCGGTGGAAATAAGCGGGGCATATCCGGTGCCCAAA ATCTTTTCGGTTCAGCATCTCAATCTTATGCTTCTGCTTTAGGAGCCTCGCTGTCGAGGAGCAGCACCCCTGACACTCAA CTTCTACCTAGAGCTGCTAGTCCTTGCCTTCCACCAATTGGGGATGGGAGGTCCGGCTCCGTAGATAAAAGAAGTTCCAA TGGCCAAAACTCATTTAATGGCATCTCATCTAATTTAAATGAGCCTTCTGATTTGGTATCTGCTTTGGCTGGCATGAATC TGTCCCAAAATGATGTAATAGATGATGAGAAACATCCCCAGTCACCGAGGCACAATGAATCTGACTATACTCATGATGTT AAACAGCATGCATACTTAAACAGGTCTGATTCTTTGCCTTTTCAGCGTTCTGCTGCTACCCAACCCTATTTAAAAGCTAG TAGAAGTAGCGGTTTTGGATTGGATCTGAATAACTCATCGTTGTATGCAAACGAACTGCTAGAATCTCATAGGGTTGGTG GAGTTTCTGTTAACTCACACTTGAAAGGACCTTCTACACCAAATTTTACTAGCAGAGGTAATTCAGCTGCTCACTATCCG AATCTTGATGACTTGAGTATTCCGTATGCTAACTATGGCATGGCTGGGTACGCCAACAATCCGTCATCACCATCCATGAT GGCAGGCCAGCTTGGGAACGGTAACTTGCCTCATTTCTATGAACATGCTGCTGCTTTGCCCGCACTAGGAGTGAATGCCA TGGACTCTAGAGCCTTGGGAAGAGGTGCAACTTTAGGACCTTTGATGGCTGCGTCGGAGTTACAGAATGCGAGAGGGTTT GGAAGTCATGGAGCAGGTAGCACTCATCAGATGCCCTTGATGGATCCTTTGTATCTTCAATACCTGAGATCAGGGGAAGT TTCTTCTGCACAGCTTGCAGCCCTAAATGAATCGGCAATAAATAGGGAATACTTGAATGCTTCATTTAGAGATTTAGCTA GCCTCCAGAAAGCTTATTTGGAGTCTTTAATTGTCCCCCAAAAATCGCACTTTGGTGCCCCCTACCTTGGTAAGTCAGCC AGCTTGAGCCCTAATTCTGGCAGAAATCCATCATATGGTCTCGGTATGACATATCCAGGAAGTCCACTGGCTGGTTCTGT TTACCCAAACTCCTTCTATGGACCCAGTAGTCCTATGAGCCAAAGTGAACGGAATATGCGGTTGTCTGGAATGAGGAATG TGGCTGGCAGTGTCATGGGAGCTTGGCAAGCGAACACTGTTGGAAGTTTGGATGAGAATTTTCCATCTTCCTTGCTCGAT GAGTTCAAAAGCAACAAAACCAAATGCTTTGAACTTGCAGAAATTGCTGGCCATGTTGTTGACTTCAGGTGCATAATGCT TGTCATACACTCATACTATGTTTTGCTTTTTGACTCTGAACATTTAGCTAACTCATGTTTGTATATTACAGTTCTGACCA GTATGGAAGCCGTTTTATCCAACAGAAACTTGAGACAGCCACAATGGACGAGAAAAATATGGTTTTCCATGAAATCATGC CACAGGCTCTTTCTCTGATGACTGATGTCTTTGGTAATTATGTGATTCAGAAGGTATTTATGTTCTTGACTTTGGACTTG TATCACATTTTTGTGGTTAGTATGTTCAAGTGGGTAGCGAAGCGAATTCATTACATAAAGCTAAAAAATTCTATCTTGTT CTATACATGCCTAACTTATTCGGTATCATGTTTAGTTTTTTGAGCATGGAACGCCGGCGCAGATAAGAGAACTGGCTGAC CAACTTACCAGTCATGTGCTGACCCTAAGTCTTCAAATGTATGGCTGCCGAGTTATCCAGAAGGTCTGCTCATCACTTTT TCCTACCTTATGATTGTTATTTGTTACCATACCATAATCGTACCCTGTTTATGTGTGTTTTACAATTTTTTACTGTTCTT TATGGAGCATTGTAGTTTATTAACAGAGTAGTGTGTCAATGTTGTGGCCTCTGGTCACTAAGGTCGGCATAGCATTACAT TTTTCCATCATGGCAATAGCGGCTAAGATTGCAGTCAGTCATGTAGCGGCTGTGAGCCTGTGACAGCCATGGCAATGGAC AGGCCCCTCTCTTCTGACCAAATCCTGGCAGTTTCAATGCCAGCTTTTGGAGGGGCCTCTTTTGTACTGAGCTAATGTCC GTTTTCCAAATCTGTATTTTTTTTAAATGGCCTAGCTGATTAGTGCTCTGAATGCCCTGGTTTATGTGCATTTAATTGAT TAATTCCTGCTATTAAATGTTTTGGATTGCTCAATGAAGAAACTCAAGAAAGCACAAGTTTTTTTTTTTTTGAAATATCA ATGTAATTAATATATTGTTTTTCATAATAACTTTTATTTGTTTCCTTAACACGTTTAGGACACTCATCATGAAGCACGGA AACCTGTCTTGAAAGGAGTGTCCCGGTGTTGATACGACTTGTCGACCTCGACACCCGTACTTCACGTGTCAAACACCTTT TCGCAGTGTTTGAGCAAATTTTTCTTTTTCTTTTTCTTTTTGAAAAGGTGGATATACACACACACACACGGTGTCCCAAT GTCCTACTTTTGGGATGTTAGTCGTATCACGGTGTCCATGTCGTGTCCGGGTTGGTGTCAAAGTCGGTGCTTCATAGCTC TTCGACAATTCCTTATTTTAAAAACATTTTGTTCATAGAGTACAACATATTCAGCGAAAAAGGACATTAACCATCCTACT CTTTTGGTAATTCCAGTCATTGTCCCTCTTTATCATTGTTTCTTTTTTCTTTTATTTATGTATATTTGGGTGTGCTTTCA ATACTTGTTGTTAGCAACTCAAAATTTTCATGATTACTAATATGAATGGTGCTTTTTTAAAATATTATTATTAAAAAAAT TGGAAGTGTTGATTATGAGACACGGTACACATTTTAAAACGACCAGTGTTATTAGTTGAGTATATGTCTTATTTTTTATT ACTTTTTGAGTTTTGAGCATTTATTTGTACTATAAATTATTTGTAATGTATAAGCTACCTTTTGTATAGTGGTAGTTCTT TCATGTGCTACAAGTTTCTGCCTTTCCAGCATTAACTACTATGGTATGCCATGTAAAAATTAGGTGTGTAAAGCAATTCT TTTCATTTTATTTTTGTCTACGTGGAAAGGTGAGGAACATATCGCACCAAAATTCCACAAAAGTGTGTCTACATGTGTGT GCGCATTTGTTCATTTATTTTGAGACTGATATTTTGACATATTATTATGGTGTGAGTGATAAGTGCTGCTCTGATTAGTG TGGGTTGATGGTAAACTTAACAGTTATTCATCTTGTTTTTTGTTCTAAATTGTCCAGGCAATAGAAGTTGTTGGTTTAGA TCAGCAGACTCAAATGGTTGCAGAACTGGATGGTCATATCATGCGTTGTGTTCGTGATCAAAATGGGAACCATGTCATCC AGAAGTGTATTGAATGTGTACCTGAGGATTCAATCCAATTCATTGTGTCGACTTTTTATGACCAAGTTGTGACACTGTCA ACTCATCCATATGGTTGCCGAGTTATACAGGTCACAAATGCATCTTTTGCTTTAATTTGTGTAAACACGTATTTGCTTGA TTAGTAGCTTGCGAGATAGACATTATAATTCTAAAATTGACGTTTCTATAAGCAGAGAGTCTTGGAGTACTGCCATGATC CCAAAACGCAGCAGATTATGATGGATGAGATTTTGCAGTCTGTCTGCATGTTAGCACAAGACCAATATGGGAATTATGTT GTACAGGTTTGTTATATCTCATTTCGTTTTTTTTGCTTTTTACAAGTTGTGATTTTATTTTCTACATGTTGGCAGTAGTC CCATGCTCTTTTGCTAAGTATTATCGTGATCAATTATGGCCAATCGGTATCATAAATCATTGAGTATGTGAAACATTGAA TTAATTGTGAAATCCCTTGATTTAAAAGCTAATGATAGTAACATTTTGTCTGTACTGGAATTGAGCAAGGTTGATATTGA AATGCTTGAGGTACGGTGGCTCTAACTGTGTTCTATTTTGCAATTCTGATAGTCTAATATTTTATAAAATGGATGGTAAA TATACCTGCGTGGCTTTGTGGCTTAACTGCTGGCACTTCATAGGTTCTTTACTTTTTCTAGCCTTAGTTTTCGCAATTGA GATACTAGTGAGCTTATGTGGTGTTAATTCGTAACTTGTGTTGTGCTTTGAGTTTTTTTGTTGGATGATTTTTTTATTGC CTCTTTAGATTTAGCGCATTTGCGTTAGTCAGTGATCATTGTTTAAACATTTCAGCATGTGCTGGAGCATGGCAAGCCAC ATGAGCGTTCGGCTATAATAAAAGAATTAACTGGGCAAATAGTGCAGATGAGCCAGCAGAAGTTTGCCTCCAATGTCATA GAGAAGTGTCTATCATTTGGAACACCTGCAGAGCGTCAATTCCTTGTAAATGAGATGCTTGGTTCTACTGATGAAAATGA GCCCCTACAGGTTTGTGCATGACCTATTTAGAATCTACAATGACAAAACAATTTATAAGATGATGGTTTCTTCAGTTTTG TTATCACAGCTCAATCGTATTGTTGAAAATTATTTGGCTTATCTTTTCACATCATTGTTTTCCTTCTTGGAATCTAATCT TGGCTTGCTGTATGCACAAAGATTAGAAGATACGACTATACATGGGCAAAACTTGACTAAGTTTTCTAAATCCATTATTA AGTTCTCCTTTCAAATAATGACACATGGATAATTTTTTAAACTCAGCAACATATTCTTGATGGAGGCCATTTCATGTTGG AAATAAAAACCATTGTGTCATTGTTTGGGTGGAAAACTTGATAGCAAAGATACACGGAATTTATGTAAGTTTTTTCCACT ATATTACAGATTGTAGGGAGATATCCATTTAATGCTCTTCATGTTTATTTCTAGAGTTTGAAGATGGTTGAAATTTTTTA TAATAATTAAATTTGCTTTTAGTTGTTAGAACTTACAAGTTAAGCCATTCATATTGTATCAGTTAATGTCCGGTAGGGGT ATAAATAGGTTAGGCCACTCATCGGGTGCCTATAGGCTATATAGCCTACTAAACAACTCAGCTCAAGGTTTTTTTAAAAG CTTTATTTAGCTAAGAAGGTTAGACTTGGCCATTCAAAAATCCTTTTCGGCTGAACAGACTAGCCTATTTAAGTTAGGAG TTAGCTCTTATTTCCAATAAAAAAACTAGATCTGGCTTAAGTTAGGTACTGTCATTCCTTTTGTTTTATTACTTGACGTT TTCTTACAATTTGCTTGTGTTTTCTTGGTTTTAGGCTATGATGAAGGATCAGTTTGCAAATTATGTTGTACAGAAAGTGT TGGAAACCTGTGATGACCAGCAGCTGGAGCTAATCCTTAATCGAATTAAGGTTCACCTGAATGCCTTGAAGAAGTATACT TATGGGAAGCACATTGTTGCTCGTGTAGAGAAATTGGTTGCTGCTGGAGGTACTTTCAATCTCATAAATTTACTCTTCCA TTTGACTCGTAGGTTACATTTCTTACAATTTTCTCAACATGGATTTTTTATAGTGTATTCATGAAATCAGTATGCAATGA TTTGGTTTCCATTCTTAAAGTGCTGTATGTTCAACTTTAATTTAATAGCTGAGTTCCCTTTAAATTCATCCATGGTCTCA CTTGACATTTTTCACAAATTATTTGTGTACATCGAAAAACAAAAATTGAAAAAAAGGTTTCCTTTCCATTGAACCATGAA ATTTGATTATTTGCTATTTTATTCACAACTAGCATCATGATGTAGAATTATCTGTCAGTCTGGTAATGTTTAGCAAATGA AGAGTCATTCTCATTACTGCTGTGCATGATGAATGATTTTAATTTTTCATGCCATGCCAAAGGATGCGTCTAAACTCTAA ATCTCTTTAGTTACCAGTTTGTAGAATAGTTTAGTTCATAAAAGCAGAAAACTAAGAAAACTCGTTTGATATCTTTTAGT TTTTAAAATCTGTTCTTATTGCATTTTTAAAACTGAAATCACAAAACATCATCCCGCAGATGTTTTATGTTTCCATTTAG AGTTCAAGACACATGTCTGTCAACTTTGAAAAACATATCGCTCAAACAGTTTTGCTCTCTTTCTTCTTCTGAAAAACATG TTTTTAAAAATTGTTTCTGAAAATAGTTTTTAAATTTAGAAAACTGAGAAGAGAATCAAACAAGCTTTTAAGGTTTTGTT TAAGCTGGATGATGAAGTTTCATGAAGTGACTTATAGAGTTTCTTTGAATGTTTCATTATGTGTATATAACTAATAAAAT GCTTGATTTCATGTTATGCAGAGAGGAGGATTAGCTTTCTGACCCTAAATCCTGCACAGGTGGTATAGGAAATGAAGTTA TGTACAGCTAACTGAGGGTAATAAGCAACTGCTTGCTTTTTCTTCTCTCCTTGATTGGAATTAATTAATAAATTGTTAGT TGTACTTGAAACTGTACATTTGTTAGTTTGAGGATATACCTAGAATCAGTTTAGCTGAGGAGGCGAAGGCTCAGGTTCAG TCGGTAAATTATGCCTGATGCGCTTGCGGCATAGATATATTTATGAGCTAGTTTTAATGTTGTACAGAGAGGTCTTGACT GTACAAATTTCCCTAGGTTGGTTATGGGAGCACTTGTATTCCGGATGCAAACATGTTTTTGAGGATTTTCTTTATGAGGA TGCTCTTTGGATAA
CDS sequence (LotjaGi1g1v0088100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTGATGTGGCGATTCGATCGATGATGAAGAACGGTGATTTCGGCGAGGATTTGGCGGCGCTGAGGCGGCAGCAGGT GGAGGCGAATGAGAGGGAGAGAGAACTCGCGATGCTGCGAAGTGGGTCGGCGCCTCCTACGGTGGATGGTTCGTTGACGG CGGTTGGAGGGCTGTACGGTGGTTCTGGTGGCGGCGGAAGGTATTTTGGGAATGAGGATGAGATTCGTGCTGATCCGGGG TATGCTGATTATTACTACTCGAGCGCGAATCTGAACCCGCGGTTGCCGCCGCCTCTGGTGTCGAAGGAGGATTGGCGGTT CGCGCAGCAGATGAAGGGTGGCTCGAAGGTTGGAGGGATCGGGGATCGGAGGACATTGAGTGGAAGGGTGTATGATGATG GTGGTAATGGAGACATGTCACTGTTTTCTATGCAGCAGCGTGCTGGGTTTAATAAGGATGATGGTGGTTTGAAGCAGCAG CAGCGGAGGAGCGCCGCCGAGTGGGCCGGCGGCAACGATGGCTTGATCGGCTTGCCGGCATTGGGGCTTGGAAGGAGGCA GAGGAGCATTGCAGAGGGCGAGATGAATGGTGCAACATCGGCCTCCCAGCAGCCACATCATCTGCCTGTCGGTAATGTGT TTGATGATATTCCTGGAAAATCGGAGTCCCATTATGCTTATCTGCAGCAAGAATTGGATGCTTTGCAGTCCGGTGGAAAT AAGCGGGGCATATCCGGTGCCCAAAATCTTTTCGGTTCAGCATCTCAATCTTATGCTTCTGCTTTAGGAGCCTCGCTGTC GAGGAGCAGCACCCCTGACACTCAACTTCTACCTAGAGCTGCTAGTCCTTGCCTTCCACCAATTGGGGATGGGAGGTCCG GCTCCGTAGATAAAAGAAGTTCCAATGGCCAAAACTCATTTAATGGCATCTCATCTAATTTAAATGAGCCTTCTGATTTG GTATCTGCTTTGGCTGGCATGAATCTGTCCCAAAATGATGTAATAGATGATGAGAAACATCCCCAGTCACCGAGGCACAA TGAATCTGACTATACTCATGATGTTAAACAGCATGCATACTTAAACAGGTCTGATTCTTTGCCTTTTCAGCGTTCTGCTG CTACCCAACCCTATTTAAAAGCTAGTAGAAGTAGCGGTTTTGGATTGGATCTGAATAACTCATCGTTGTATGCAAACGAA CTGCTAGAATCTCATAGGGTTGGTGGAGTTTCTGTTAACTCACACTTGAAAGGACCTTCTACACCAAATTTTACTAGCAG AGGTAATTCAGCTGCTCACTATCCGAATCTTGATGACTTGAGTATTCCGTATGCTAACTATGGCATGGCTGGGTACGCCA ACAATCCGTCATCACCATCCATGATGGCAGGCCAGCTTGGGAACGGTAACTTGCCTCATTTCTATGAACATGCTGCTGCT TTGCCCGCACTAGGAGTGAATGCCATGGACTCTAGAGCCTTGGGAAGAGGTGCAACTTTAGGACCTTTGATGGCTGCGTC GGAGTTACAGAATGCGAGAGGGTTTGGAAGTCATGGAGCAGGTAGCACTCATCAGATGCCCTTGATGGATCCTTTGTATC TTCAATACCTGAGATCAGGGGAAGTTTCTTCTGCACAGCTTGCAGCCCTAAATGAATCGGCAATAAATAGGGAATACTTG AATGCTTCATTTAGAGATTTAGCTAGCCTCCAGAAAGCTTATTTGGAGTCTTTAATTGTCCCCCAAAAATCGCACTTTGG TGCCCCCTACCTTGGTAAGTCAGCCAGCTTGAGCCCTAATTCTGGCAGAAATCCATCATATGGTCTCGGTATGACATATC CAGGAAGTCCACTGGCTGGTTCTGTTTACCCAAACTCCTTCTATGGACCCAGTAGTCCTATGAGCCAAAGTGAACGGAAT ATGCGGTTGTCTGGAATGAGGAATGTGGCTGGCAGTGTCATGGGAGCTTGGCAAGCGAACACTGTTGGAAGTTTGGATGA GAATTTTCCATCTTCCTTGCTCGATGAGTTCAAAAGCAACAAAACCAAATGCTTTGAACTTGCAGAAATTGCTGGCCATG TTGTTGACTTCAGTTCTGACCAGTATGGAAGCCGTTTTATCCAACAGAAACTTGAGACAGCCACAATGGACGAGAAAAAT ATGGTTTTCCATGAAATCATGCCACAGGCTCTTTCTCTGATGACTGATGTCTTTGGTAATTATGTGATTCAGAAGTTTTT TGAGCATGGAACGCCGGCGCAGATAAGAGAACTGGCTGACCAACTTACCAGTCATGTGCTGACCCTAAGTCTTCAAATGT ATGGCTGCCGAGTTATCCAGAAGGCAATAGAAGTTGTTGGTTTAGATCAGCAGACTCAAATGGTTGCAGAACTGGATGGT CATATCATGCGTTGTGTTCGTGATCAAAATGGGAACCATGTCATCCAGAAGTGTATTGAATGTGTACCTGAGGATTCAAT CCAATTCATTGTGTCGACTTTTTATGACCAAGTTGTGACACTGTCAACTCATCCATATGGTTGCCGAGTTATACAGAGAG TCTTGGAGTACTGCCATGATCCCAAAACGCAGCAGATTATGATGGATGAGATTTTGCAGTCTGTCTGCATGTTAGCACAA GACCAATATGGGAATTATGTTGTACAGCATGTGCTGGAGCATGGCAAGCCACATGAGCGTTCGGCTATAATAAAAGAATT AACTGGGCAAATAGTGCAGATGAGCCAGCAGAAGTTTGCCTCCAATGTCATAGAGAAGTGTCTATCATTTGGAACACCTG CAGAGCGTCAATTCCTTGTAAATGAGATGCTTGGTTCTACTGATGAAAATGAGCCCCTACAGGCTATGATGAAGGATCAG TTTGCAAATTATGTTGTACAGAAAGTGTTGGAAACCTGTGATGACCAGCAGCTGGAGCTAATCCTTAATCGAATTAAGGT TCACCTGAATGCCTTGAAGAAGTATACTTATGGGAAGCACATTGTTGCTCGTGTAGAGAAATTGGTTGCTGCTGGAGAGA GGAGGATTAGCTTTCTGACCCTAAATCCTGCACAGGTGGTATAG
Protein sequence (LotjaGi1g1v0088100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSDVAIRSMMKNGDFGEDLAALRRQQVEANERERELAMLRSGSAPPTVDGSLTAVGGLYGGSGGGGRYFGNEDEIRADPG YADYYYSSANLNPRLPPPLVSKEDWRFAQQMKGGSKVGGIGDRRTLSGRVYDDGGNGDMSLFSMQQRAGFNKDDGGLKQQ QRRSAAEWAGGNDGLIGLPALGLGRRQRSIAEGEMNGATSASQQPHHLPVGNVFDDIPGKSESHYAYLQQELDALQSGGN KRGISGAQNLFGSASQSYASALGASLSRSSTPDTQLLPRAASPCLPPIGDGRSGSVDKRSSNGQNSFNGISSNLNEPSDL VSALAGMNLSQNDVIDDEKHPQSPRHNESDYTHDVKQHAYLNRSDSLPFQRSAATQPYLKASRSSGFGLDLNNSSLYANE LLESHRVGGVSVNSHLKGPSTPNFTSRGNSAAHYPNLDDLSIPYANYGMAGYANNPSSPSMMAGQLGNGNLPHFYEHAAA LPALGVNAMDSRALGRGATLGPLMAASELQNARGFGSHGAGSTHQMPLMDPLYLQYLRSGEVSSAQLAALNESAINREYL NASFRDLASLQKAYLESLIVPQKSHFGAPYLGKSASLSPNSGRNPSYGLGMTYPGSPLAGSVYPNSFYGPSSPMSQSERN MRLSGMRNVAGSVMGAWQANTVGSLDENFPSSLLDEFKSNKTKCFELAEIAGHVVDFSSDQYGSRFIQQKLETATMDEKN MVFHEIMPQALSLMTDVFGNYVIQKFFEHGTPAQIRELADQLTSHVLTLSLQMYGCRVIQKAIEVVGLDQQTQMVAELDG HIMRCVRDQNGNHVIQKCIECVPEDSIQFIVSTFYDQVVTLSTHPYGCRVIQRVLEYCHDPKTQQIMMDEILQSVCMLAQ DQYGNYVVQHVLEHGKPHERSAIIKELTGQIVQMSQQKFASNVIEKCLSFGTPAERQFLVNEMLGSTDENEPLQAMMKDQ FANYVVQKVLETCDDQQLELILNRIKVHLNALKKYTYGKHIVARVEKLVAAGERRISFLTLNPAQVV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 24 | 1017 | 994 | 0.0 | – | |
| PANTHER | 24 | 1017 | 994 | 0.0 | – | |
| MobiDBLite | 266 | 314 | 49 | - | – | |
| Pfam | 279 | 687 | 409 | 4.8E-108 | ||
| MobiDBLite | 295 | 314 | 20 | - | – | |
| ProSiteProfiles | 669 | 1009 | 341 | 131.577 | ||
| Gene3D | 669 | 1014 | 346 | 4.3E-141 | ||
| SUPERFAMILY | 672 | 1006 | 335 | 4.03E-118 | ||
| ProSiteProfiles | 689 | 724 | 36 | 10.997 | ||
| SMART | 689 | 724 | 36 | 9.8E-6 | ||
| Pfam | 690 | 716 | 27 | 1.8E-5 | ||
| CDD | 690 | 1005 | 316 | 3.48043E-175 | ||
| ProSiteProfiles | 725 | 760 | 36 | 10.46 | ||
| SMART | 725 | 760 | 36 | 6.6E-7 | ||
| Pfam | 728 | 757 | 30 | 8.7E-8 | ||
| SMART | 761 | 796 | 36 | 2.4E-6 | ||
| ProSiteProfiles | 761 | 796 | 36 | 10.39 | ||
| Pfam | 763 | 794 | 32 | 1.6E-5 | ||
| ProSiteProfiles | 797 | 832 | 36 | 10.157 | ||
| SMART | 797 | 832 | 36 | 1.3E-7 | ||
| Pfam | 799 | 829 | 31 | 9.9E-6 | ||
| SMART | 833 | 869 | 37 | 5.9E-7 | ||
| ProSiteProfiles | 833 | 869 | 37 | 10.764 | ||
| Pfam | 835 | 867 | 33 | 2.5E-8 | ||
| ProSiteProfiles | 870 | 905 | 36 | 12.0 | ||
| SMART | 870 | 905 | 36 | 1.3E-6 | ||
| Pfam | 871 | 901 | 31 | 4.4E-7 | ||
| ProSiteProfiles | 906 | 941 | 36 | 10.04 | ||
| SMART | 906 | 941 | 36 | 6.5E-8 | ||
| Pfam | 907 | 939 | 33 | 3.9E-5 | ||
| ProSiteProfiles | 942 | 983 | 42 | 9.807 | ||
| SMART | 948 | 983 | 36 | 8.6E-7 | ||
| Pfam | 956 | 982 | 27 | 8.4E-7 | ||
| ProSiteProfiles | 984 | 1020 | 37 | 4.674 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | RNA binding | Interacting selectively and non-covalently with an RNA molecule or a portion thereof. |
Expression pattern of LotjaGi1g1v0088100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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