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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0095400 |
| Transcript ID | LotjaGi1g1v0095400.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glutamine synthetase; TAIR: AT5G37600.1 hypothetical protein; Swiss-Prot: sp|P32289|GLNA_VIGAC Glutamine synthetase nodule isozyme; TrEMBL-Plants: tr|A0A0S3RZR8|A0A0S3RZR8_PHAAN Glutamine synthetase; Found in the gene: LotjaGi1g1v0095400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:14468932..14475217) extracted from Lotus japonicus Gifu genome v1.2.
CTGCATCATGCAACAAAGCTGGTATCAAACTCGAAGGCGGTTGATTCCAGACACGGCACGAGCCGCCATCTCTCAACGTT TGGCGAGCAAGCATATCTACTACTGTATTATGTTCGCGAGGTAGCTGCACCATGGGCACCGCAATTGTTTGGTTTTATGT AACATGATGAGATGTTAGTGTATGATGCATATATTCACTAATTTCAATTTCAATTTAACTTATCTTAAATTATGGATATG GATGTAACCAAAAAAAAATTATGGATATGGATAGAATTTTAAATTTAAATATTATTTTTGCAATTCTCAGGGACTGCACT ATAAAACTCACACAACGTTGTACCCGAATTCCATTCCATGAACGAAGAAGAAAGGAAGAGAATAATAAATATCACTCCCC TCTGAATTAGAGTCTCTGTTTCAAGCTTTTGATTTTTTTGACGATGTCGCTGCTTTCAGATCTTATCAACCTTAACCTCT CCGAGACCACCGAGAAAGTTATCGCCGAATACATATGGTTTCTCTCTCTCTCTCCCTCTCTCACATTCATGCTCTGTTTT CCTCTGTTTGAAGAAACAAGCATTGAGACATGGAATGCATCTATTTCTTTGTTTTTGAATTAATTCACGTGTTCAGGGAC ACTCCCTTTGATGATTCTCGTAATGGGTGTGATTTGATTTTGTTTATCTTCCATTTGATGTACCACACATTGCACTCTAT TAGTCTCTGCATCTCTCTCTTCCCCTGTTTACTCTGTTTCATCTAGGTGAATGGTGGGTGTCTTTGTTGTGATATGTTAA TAGACCTTTAGATTATGACATTGGTTTGGTTTCGTTCTGTTTTTGTTGCCATCAATTTAACAATATTGAATTGGAGTGAA AAATAGCATTTTCCCTTGTTGTTTATGTGTTTGCTGCTTTTGTGTGGTTTGATTTTGGTTTATACACTCTCTTGTTTTTT CAATATGTTTTTCTATACCTTTTAATCTCATACCTCCTTTTATTTGCATTATGATAGGATTGGTGGATCTGGTTTGGACA TGAGGAGCAAAGCAAGGGTAATTTACTTCACCATTTTACAACCAAAACCACCAAAAGAAAATGAGTGAATGCTCAATTTT GCAAGTGTAGGCCTCTTTTCCTAGAGGAAAGAAATAGTCTTGTGGTTCCTGAAGTGTAAATGTCTATCAAGTTACTCCCA CGTTTGAGATTTAATTTGATTGACATTTGGTGCAATCAACGACTAAATTGTCCAAGAGGCTTTTTCTTGCAAGGACAAAA TTCAGCATTCACTAAAATAATCTTATGGTCTCAATTATTAAAAACATACTTTCAAGAAATTTTTAGTTGAATATATAAAA TGTTTCGATCAGCTTTTCTTTCATCTATTAAGATTCTCAAATCTAGAAGTTACTCAGATAAACATGTAGAAGTGTTTTCA AACATGCATGAGATGATCCTTCCTTCCTTTAGGTCTCTAAACTCGTTAGGATACGGATCAAATAGTACTTGATAGTTTAA CTAATGTTTTGTTAGTAGATAATAGACTCTAATTAGTACTATTTAGTTTGCATCCGAATAAGCTATTACAATAACTTAAT TTATTATTATTTAAAACTACATGGCTCATTAATATAAGAATCTTTTATAAATTCTTAAAAAGTAAGGAAAAGTATGATTT AATTCTAACTAATGCATATACAAAATGATTTTGGATATAGACTCTCGCAGGACCTGTTGATGACCCTTCAAAGCTTCCCA AGTGGAACTATGATGGTTCCAGCACTGGTCAAGCTACTGGAGAAGACAGTGAAGTGATCTTACAGTAAGCCTCTTTTACT AGTCTCACATGATCATAAATTCTGAGGAGTACAATATGGATCCTCTGCAGCCATATTTCTCTGCAGCATTCGGCTAAAAG TTCTTGGTCATTGATTTTTATATTAATTGGTCCATATTGACTAATAAACAAATTAAACTAGACAAAACTTTTATACACTT AGTAATTTTGATGCTGCAGAGGCTGCATGGCAGTAAATGATCCAAATTCATTCTTGAGTATACACTTTTTGATATTGTTT CATTTTATTGAAAATTTCCTCTGTTGCATATTTTCAAACTTCTCTCACTAATTTTCTCAATCTTAATCAAATACAACAGC CCACAAGCAATTTTCAAGGATCCATTCAGGAGGGGCAACAATATCCTGGTGTGTTTCTTCTTGCCTACTATGTTATTTTA AGCAAGAGCATTATTCTCCAGTTAAAGTTAACCTTGTTTGCTTGGTGTGATCATCTCATGTTTTTTCAATTGTGATTGAT TAGGTTATGTGTGATTCCTACACTCCTTCTGGGGTGCCACTTCCGACAAACAAGAGACATGCTGCTGCAAAGATTTTCAG CCATCCTGATGTTGTTGCTGAAGAACCTTGGTAATGGTGTTGCTTCATTGTTGATCTTGTGCATGTTCGGAAAACTCGTT TGAAAACTATGCGAAAACAAAAATCAGTGTGGATAGAAACAATTTCCCTTAGCTTTTGCTTCTGTCCACCGTGACATTAG TTTCACCATGAATTTAGTTTCACCATGTTTTTCAAATGAGTTCCTAAACATGCAGGGAATTGACCTTTATCTATGGTTAT CTTCTTTTTATTAACTAAGCATTTCTGCATGATCTCCAAATAGGTATGGCATTGAGCAGGAATACACCTTGTTGCAGAAA GATATCCAATGGCCTCTTGGATGGCCTGTTGGTGGATATCCTGGCTCACAGGTAAAAACGTGTTATGGAATCTTTATAAT TGTTTCATCAGTATATTTTTCTATATACAATTTGTTTGATATGTCATTCATTGATAACTCAATTCACTTAAAAAAATTGT TTTTAATTATGTAAATTTGTTAACAGCAAAATAATAATAATTATATTTCTAACGCGGTTTCACATGGAACTCAGCGTGGC AAAATCACATTTGCATTTGCACCAACGTCAAACCAAACTTACGCTTAGTCTTGTGATTTCTTCTCCTGATTAGTTTTGTC TTGTTTTGATATGGACTATATTAGCATGTTTGGATCAACTTCTGTTTTCTCAGAATTCATTATGGTGCCAGAAGTTACTC ATAGAAGTTTTTTCACTTTAACTTTAGAATCAATTATAGAATGATTTTTTTTTTAAATTATAGAATGTTCCAAACATGCA CTAAATACTGTATTTACATCTTTGCTCAAAAGGGACCATACTATTGTGGCAATGGTGCTGACAAGGCTTTTGGGCGTGAC ATTGTTAACGCACATTACAAAGCATGTCTTTACGCTGGCATTAACATCAGTGGAATCAATGCAGAAGTGATGCCTGGCCA GGTAAGTTGGAACATTGTGTTCTAATTTTCACTTTTTCCACTCTTTACCCTTCATATATCATACATATGATTCAAAAAAT ATGAGTGTAATCTAATTCCTTTTGTCATTATATGTAGTGGGAATTCCAAGTTGGTCCATCTGTTGGCATCTCTGCTGGTG ATGAGATATGGGTTGCTCGTTACCTTTTGGAGGTATGCACCATATCACCATCAGTTTAATTTCTCTCTTTTGAAAGAAAG ACTTGGAATATTATTCTTTTCTTTCTTCTTTTTAAATACTGCAATTAACATCTTTGTTTATGTCTTTACAGAGGATCACT GAGATGGCTGGGGTGGTGCTTTCCTTAGACCCTAAACCAATTAAGGTGGATAATCCTGAACAGGTTTTGGATTTGTTACC TAATATTGTTTTGCTTAAATGAGAGAAATAGAGATGAGAGATTTTAATTAAAGGAAGAAGGTAGAGAAGGAGAGGAAAGT AACCTTTATTGGAGAGGAAAAATAAAAATAAATATACTATTCCCCTGAGCTAGAGTTCTTTGTTTTGCTGTTGTTGTTAA CTTTCCGAAGTGCAAAATAAAGATAGAAGATAGGTAAAGAAGATACTTTGACTAAAATGATTTGAACTAATGGAAAGATC TTCTAGAACTAAGGTTTGTATAATACAAATTACAAATTTAAAGAAGCATGAAGTGTAGCTGTGTAGGAAGTAGCAGAAAA CTGCTAAGAATAATTTATGTCCGAGTGTATGTTTGAATTTCCGTTTGTAAAATTTAAAAGCATTTTTAATGGAAATCTGC ATCTTATGATGAATTGAAATAAAAATGCTTTTAAGTGAATATAATGGAAATCCAACTATACAGTTAGTTTGGAAGTTGAA AAGTAACCAAAATGGTTATTTTAGTCAAGAAAATTCATAATCATTAATAATTTTCACCCCTGTCTGAATCTCCAACTTTA GATTTTAAGCAAAACTTGGAAAGGGATCATGTTCACTCCCTCCTCCTTGCTTCATTTTGTTCCATTCCCACAAAAATGTT AAGGCCATTTGATGTGTGTGCACAAGGAGATTGTCTAACTCATCCCAAGCCAAGTGTTGATTAGCCTCGTCTTTAGTGTG GATCAGTATAATTAGATAAGTTGATTAGAATTTACTCTCACTTCTTTATTTAGATTTGAATACACAATTTCTAGTTAATT GAGTTATTTAACAATTTGATAAGTTAGATAGATGTGTACAACTATTGAATTTTGTTTGATGATATTGACTCATGTCATTT GAATTGTGTTCCCATTAACCAGGGTGATTGGAATGGTGCTGGTGCTCACGCAAATTACAGGTAGTGATGGTGCAAATTAC AATTAATAATGGTATCTTAAACTTAATATCACTTTGCTCCAGTTCTTATTGACAAGTTGATGATAATGTTGCAGCACCAA GTCCATGAGAAATGATGGTGGTTATGAAGTGATAAAAAGTGCAATTGCCAAGTTAGAGAAGAAGCACAAGGAGCACATTG CTGCTTATGGAGAAGGCAATGAGCGTCGTCTCACAGGAAAGCATGAGACAGCTGACATCAACACCTTCTTATGGGTAACT AAAAAACATCCCTTATCAAAACATGTTCATTAAAAGATTTTTTTTCATATATCAGAATCCTCTCATATGGACACTTCACA TGATACTCTCTGTCTCCTATTAAATAAGTGAGACTAGCTCTTGATATTAATGAAGAGAGAGGTAGATACAAAACTTTACA TGACATTGTCATGTAACATTAGAGTATCCTACTCTCGCCTTTTATGTGCCAAATAGATTTTCATGGTTGAGAAGAGTTTC GAAGTGTGTGTGTGTTTGATTCCACGTTTGGGAGTTTTAGGACCAATTCTCATTGACCAGAATCATTTTTAGGAGGTTAT ATAAACATTTGACAATTGACTTAGAGAACTGATTTTAGTCCCAAAATAATTTCAGCTAGGGAGAGTAGTTTTTGGGTTGA CATAATCAATTGTGAGGTTTCTTAACTAGATTTCACAACATTAACCAATAGAAATCCTTTTTCCAGAAAACTTATTAAAC ATAAATCACTTCATTTGCAATTGATTTTAACTCACTTTTACTTAAATCAATTTTATTAAAATCAATTTCATCCGAAATCA ATTCTAACAATTCTGACTTCATTTGCATTATGGATTGCTGTGTTGTGTGTATGCAGGGTGTTGCAAACCGTGGTGCTTCT GTGAGGGTAGGCAGGGAGACTGAAAAAGCAGGGAAAGGGTATTTTGAGGACAGGAGGCCAGCTTCTAACATGGATCCTTA TGTGGTCACTTCCATGATTGCAGAGACAACCATTCTCTGGAAGCCATGAACACCACCCTTGAATCACTCCATCACTGATG ATTCTACTTATAATAGTGCTTCTGTGTTTCAGTTAGAATTTAGTCTCTTGTTTTGTCTCATGTGATGATGTTTAAGGACT TCTTTGTTGGTGCTACCTGCTTCTATCAGTCAAGTGTGTTGCTTTATTAGTGTCCTGTGTTTACTATAATGTAATGGCCA TGAAGTAATAACAATGTTAGACTGGAATTGTCCCCAAATTTGAGTTTCCTGACAACTTATTCCAACTCTTTAGCGTGATT CATAAAGTGCCTTAATTTATGTTTTATACTTAGAATTTCAAAATCAAATTATGGAATCGAAATCATTTTATAACAGTCAA GTTGTGATCTCCTCTGCCCAGTAGCTTTAGAAATGGACCCTGGTCAAAGAAAATTGTGTTCACCACTACTCTAGAGGGTT ATCTTAAGAGCTGTGTATTAGTGTGTGTTTGGATTTCAGTTTGCAAAACAGAGATTGAGTCAATGTGGGTTTGTAAAACA TAGTTTGGATGAATGTGAGTTTGTTGTAATGTGATTTATGTTGGGA
CDS sequence (LotjaGi1g1v0095400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCGCTGCTTTCAGATCTTATCAACCTTAACCTCTCCGAGACCACCGAGAAAGTTATCGCCGAATACATATGGATTGG TGGATCTGGTTTGGACATGAGGAGCAAAGCAAGGACTCTCGCAGGACCTGTTGATGACCCTTCAAAGCTTCCCAAGTGGA ACTATGATGGTTCCAGCACTGGTCAAGCTACTGGAGAAGACAGTGAAGTGATCTTACACCCACAAGCAATTTTCAAGGAT CCATTCAGGAGGGGCAACAATATCCTGGTTATGTGTGATTCCTACACTCCTTCTGGGGTGCCACTTCCGACAAACAAGAG ACATGCTGCTGCAAAGATTTTCAGCCATCCTGATGTTGTTGCTGAAGAACCTTGGTATGGCATTGAGCAGGAATACACCT TGTTGCAGAAAGATATCCAATGGCCTCTTGGATGGCCTGTTGGTGGATATCCTGGCTCACAGGGACCATACTATTGTGGC AATGGTGCTGACAAGGCTTTTGGGCGTGACATTGTTAACGCACATTACAAAGCATGTCTTTACGCTGGCATTAACATCAG TGGAATCAATGCAGAAGTGATGCCTGGCCAGTGGGAATTCCAAGTTGGTCCATCTGTTGGCATCTCTGCTGGTGATGAGA TATGGGTTGCTCGTTACCTTTTGGAGAGGATCACTGAGATGGCTGGGGTGGTGCTTTCCTTAGACCCTAAACCAATTAAG GGTGATTGGAATGGTGCTGGTGCTCACGCAAATTACAGCACCAAGTCCATGAGAAATGATGGTGGTTATGAAGTGATAAA AAGTGCAATTGCCAAGTTAGAGAAGAAGCACAAGGAGCACATTGCTGCTTATGGAGAAGGCAATGAGCGTCGTCTCACAG GAAAGCATGAGACAGCTGACATCAACACCTTCTTATGGGGTGTTGCAAACCGTGGTGCTTCTGTGAGGGTAGGCAGGGAG ACTGAAAAAGCAGGGAAAGGGTATTTTGAGGACAGGAGGCCAGCTTCTAACATGGATCCTTATGTGGTCACTTCCATGAT TGCAGAGACAACCATTCTCTGGAAGCCATGA
Protein sequence (LotjaGi1g1v0095400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSLLSDLINLNLSETTEKVIAEYIWIGGSGLDMRSKARTLAGPVDDPSKLPKWNYDGSSTGQATGEDSEVILHPQAIFKD PFRRGNNILVMCDSYTPSGVPLPTNKRHAAAKIFSHPDVVAEEPWYGIEQEYTLLQKDIQWPLGWPVGGYPGSQGPYYCG NGADKAFGRDIVNAHYKACLYAGINISGINAEVMPGQWEFQVGPSVGISAGDEIWVARYLLERITEMAGVVLSLDPKPIK GDWNGAGAHANYSTKSMRNDGGYEVIKSAIAKLEKKHKEHIAAYGEGNERRLTGKHETADINTFLWGVANRGASVRVGRE TEKAGKGYFEDRRPASNMDPYVVTSMIAETTILWKP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 103 | 103 | 2.0E-45 | ||
| PANTHER | 1 | 356 | 356 | 2.4E-236 | – | |
| PANTHER | 1 | 356 | 356 | 2.4E-236 | – | |
| SUPERFAMILY | 13 | 102 | 90 | 8.89E-17 | ||
| Pfam | 22 | 97 | 76 | 2.2E-10 | ||
| ProSitePatterns | 55 | 72 | 18 | - | ||
| SUPERFAMILY | 103 | 352 | 250 | 1.18E-67 | ||
| SMART | 103 | 351 | 249 | 1.5E-61 | ||
| Gene3D | 104 | 356 | 253 | 4.3E-132 | – | |
| Pfam | 125 | 347 | 223 | 1.8E-15 | ||
| ProSitePatterns | 237 | 253 | 17 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Glutamate-ammonia ligase activity | Catalysis of the reaction: L-glutamate + ATP + NH(3) = L-glutamine + ADP + 2 H(+) + phosphate. | ||
| Biological process | Glutamine biosynthetic process | The chemical reactions and pathways resulting in the formation of glutamine, 2-amino-4-carbamoylbutanoic acid. | ||
| Biological process | Nitrogen compound metabolic process | The chemical reactions and pathways involving organic or inorganic compounds that contain nitrogen. |
Expression pattern of LotjaGi1g1v0095400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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