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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR008147
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We have found 15 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.853s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0335159.1
n.a. RecName: Full=Glutamine synthetase nodule isozyme; Short=GS; AltName: Full=Glutamate--ammonia ligasegi|170637|gb|AAA34239.1| glutamine synthetase [Vigna aconitifolia] gi|417060|sp|P32289.1|GLNA_VIGAC chr0 175471462 175475167 -
3 domain predictions
3 GO terms
Lj2g3v0658180.1
n.a. cytosolic glutamine synthetase [Securigera parviflora] gi|30692028|gb|AAP33169.1| chr2 10529644 10533381 +
4 domain predictions
3 GO terms
Lj5g3v0670760.1
n.a. PREDICTED: protein fluG-like isoform X1 [Cicer arietinum] gi|502122093|ref|XP_004497575.1| chr5 9821081 9832793 +
3 domain predictions
3 GO terms
Lj5g3v0670760.2
n.a. PREDICTED: protein fluG-like isoform X1 [Cicer arietinum] gi|502122093|ref|XP_004497575.1| chr5 9824320 9832793 +
3 domain predictions
3 GO terms
Lj6g3v1887790.1
n.a. glutamine synthetase [Lotus japonicus] gi|26892201|gb|AAN84563.1| chr6 20971741 20976794 +
3 domain predictions
3 GO terms
Lj6g3v1887800.1
n.a. glutamine synthetase [Lotus japonicus] gi|26892201|gb|AAN84563.1| chr6 20971932 20976580 +
3 domain predictions
3 GO terms
Lj6g3v1953860.1
n.a. glutamine synthetase [Lotus japonicus] gi|26892201|gb|AAN84563.1| chr6 22428085 22432710 +
3 domain predictions
3 GO terms
LotjaGi1g1v0095400.1
n.a. Glutamine synthetase; TAIR: AT5G37600.1 hypothetical protein; Swiss-Prot: sp|P32289|GLNA_VIGAC Glutamine synthetase nodule isozyme; TrEMBL-Plants: tr|A0A0S3RZR8|A0A0S3RZR8_PHAAN Glutamine synthetase; Found in the gene: LotjaGi1g1v0095400 LjG1.1_chr1 14468932 14475217 +
2 domain predictions
3 GO terms
LotjaGi1g1v0095400.2
n.a. Glutamine synthetase; TAIR: AT5G37600.1 hypothetical protein; Swiss-Prot: sp|P32289|GLNA_VIGAC Glutamine synthetase nodule isozyme; TrEMBL-Plants: tr|A0A0S3RZR8|A0A0S3RZR8_PHAAN Glutamine synthetase; Found in the gene: LotjaGi1g1v0095400 LjG1.1_chr1 14469372 14474660 +
2 domain predictions
3 GO terms
LotjaGi2g1v0192900.1
n.a. Glutamine synthetase; TAIR: AT5G37600.1 hypothetical protein; Swiss-Prot: sp|Q43785|GLNA3_MEDSA Glutamine synthetase nodule isozyme; TrEMBL-Plants: tr|I3T8A0|I3T8A0_LOTJA Glutamine synthetase; Found in the gene: LotjaGi2g1v0192900 LjG1.1_chr2 62494125 62498732 +
2 domain predictions
3 GO terms
LotjaGi6g1v0055300.1
n.a. Glutamine synthetase; TAIR: AT5G37600.1 hypothetical protein; Swiss-Prot: sp|Q42899|GLNA1_LOTJA Glutamine synthetase cytosolic isozyme; TrEMBL-Plants: tr|Q84L17|Q84L17_9FABA Glutamine synthetase; Found in the gene: LotjaGi6g1v0055300 LjG1.1_chr6 9966908 9972553 -
2 domain predictions
3 GO terms
LotjaGi6g1v0055300.2
n.a. Glutamine synthetase; TAIR: AT5G37600.1 hypothetical protein; Swiss-Prot: sp|Q42899|GLNA1_LOTJA Glutamine synthetase cytosolic isozyme; TrEMBL-Plants: tr|Q84L17|Q84L17_9FABA Glutamine synthetase; Found in the gene: LotjaGi6g1v0055300 LjG1.1_chr6 9968134 9972503 -
2 domain predictions
3 GO terms
LotjaGi6g1v0300700.1
n.a. Glutamine synthetase; TAIR: AT5G35630.1 glutamine synthetase 2; Swiss-Prot: sp|Q9XQ94|GLNA2_MEDSA Glutamine synthetase leaf isozyme, chloroplastic; TrEMBL-Plants: tr|Q8GT61|Q8GT61_LOTJA Glutamine synthetase; Found in the gene: LotjaGi6g1v0300700 LjG1.1_chr6 61825877 61831138 +
2 domain predictions
3 GO terms
LotjaGi6g1v0300700.2
n.a. Glutamine synthetase; TAIR: AT5G35630.1 glutamine synthetase 2; Swiss-Prot: sp|Q9XQ94|GLNA2_MEDSA Glutamine synthetase leaf isozyme, chloroplastic; TrEMBL-Plants: tr|Q8GT61|Q8GT61_LOTJA Glutamine synthetase; Found in the gene: LotjaGi6g1v0300700 LjG1.1_chr6 61826911 61830573 +
2 domain predictions
3 GO terms
LotjaGi6g1v0300700.4
n.a. Glutamine synthetase; TAIR: AT5G35630.1 glutamine synthetase 2; Swiss-Prot: sp|Q9XQ94|GLNA2_MEDSA Glutamine synthetase leaf isozyme, chloroplastic; TrEMBL-Plants: tr|Q8GT61|Q8GT61_LOTJA Glutamine synthetase; Found in the gene: LotjaGi6g1v0300700 LjG1.1_chr6 61826911 61830867 +
2 domain predictions
3 GO terms