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IPR008146 is a Glutamine synthetase, catalytic domain.
<p>This entry represents the C-terminal catalytic domain of GS enzymes.</p> <p>Glutamine synthetase ([ec:6.3.1.2]) (GS) [[cite:PUB00000993]] plays an essential role in the metabolism of nitrogen by catalysing the condensation of glutamate and ammonia to form glutamine.</p> <p>There seem to be three different classes of GS [[cite:PUB00004813], [cite:PUB00003408], [cite:PUB00003430]]:</p> <ul> <li>Class I enzymes (GSI) are specific to prokaryotes, and are oligomers of 12 identical subunits. The activity of GSI-type enzyme is controlled by the adenylation of a tyrosine residue. The adenylated enzyme is inactive (see [interpro:IPR001637]).</li> <li>Class II enzymes (GSII) are found in eukaryotes and in bacteria belonging to the Rhizobiaceae, Frankiaceae, and Streptomycetaceae families (these bacteria have also a class-I GS). GSII are octamer of identical subunits. Plants have two or more isozymes of GSII, one of the isozymes is translocated into the chloroplast.</li> <li>Class III enzymes (GSIII) have been found in Bacteroides fragilis. in Butyrivibrio fibrisolvens. It is a hexamer of identical chains and in some protozoa. It is much larger (about 700 amino acids) than the GSI (450 to 470 amino acids) or GSII (350 to 420 amino acids) enzymes.</li> </ul> <p>While the three classes of GS's are clearly structurally related, the sequence similarities are not so extensive.</p>
This description is obtained from EB-eye REST.
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Glutamate-ammonia ligase activity | Catalysis of the reaction: L-glutamate + ATP + NH(3) = L-glutamine + ADP + 2 H(+) + phosphate. | ||
Biological process | Nitrogen compound metabolic process | The chemical reactions and pathways involving organic or inorganic compounds that contain nitrogen. |
Transcript | Name | Description | Predicted domains | Domain count |
---|---|---|---|---|
– | RecName: Full=Glutamine synthetase nodule isozyme; Short=GS; AltName: Full=Glutamate--ammonia ligasegi|170637|gb|AAA34239.1| glutamine synthetase [Vigna aconitifolia] gi|417060|sp|P32289.1|GLNA_VIGAC | 13 | ||
– | Cytosolic glutamine synthetase [Securigera parviflora] gi|30692028|gb|AAP33169.1| | 16 | ||
– | PREDICTED: protein fluG-like isoform X1 [Cicer arietinum] gi|502122093|ref|XP_004497575.1| | 16 | ||
– | PREDICTED: protein fluG-like isoform X1 [Cicer arietinum] gi|502122093|ref|XP_004497575.1| | 14 | ||
– | Glutamine synthetase [Lotus japonicus] gi|2073448|emb|CAA73366.1| | 8 | ||
– | Glutamine synthetase [Lotus japonicus] gi|2073448|emb|CAA73366.1| | 8 | ||
– | Glutamine synthetase [Lotus japonicus] gi|26892201|gb|AAN84563.1| | 15 | ||
– | Glutamine synthetase [Lotus japonicus] gi|26892201|gb|AAN84563.1| | 15 | ||
– | Glutamine synthetase [Lotus japonicus] gi|26892201|gb|AAN84563.1| | 15 | ||
– | Glutamine synthetase; TAIR: AT5G37600.1 hypothetical protein; Swiss-Prot: sp|P32289|GLNA_VIGAC Glutamine synthetase nodule isozyme; TrEMBL-Plants: tr|A0A0S3RZR8|A0A0S3RZR8_PHAAN Glutamine synthetase; Found in the gene: LotjaGi1g1v0095400 | 17 | ||
– | Glutamine synthetase; TAIR: AT5G37600.1 hypothetical protein; Swiss-Prot: sp|P32289|GLNA_VIGAC Glutamine synthetase nodule isozyme; TrEMBL-Plants: tr|A0A0S3RZR8|A0A0S3RZR8_PHAAN Glutamine synthetase; Found in the gene: LotjaGi1g1v0095400 | 17 | ||
– | Glutamine synthetase; TAIR: AT5G37600.1 hypothetical protein; Swiss-Prot: sp|Q43785|GLNA3_MEDSA Glutamine synthetase nodule isozyme; TrEMBL-Plants: tr|I3T8A0|I3T8A0_LOTJA Glutamine synthetase; Found in the gene: LotjaGi2g1v0192900 | 17 | ||
– | Glutamine synthetase; TAIR: AT3G53180.1 nodulin/glutamine synthase-like protein; Swiss-Prot: sp|P38094|FLUG_EMENI Protein fluG; TrEMBL-Plants: tr|A0A072VVL5|A0A072VVL5_MEDTR Glutamate-ammonia ligase-like protein; Found in the gene: LotjaGi5g1v0085200 | 14 | ||
– | Glutamine synthetase; TAIR: AT3G53180.1 nodulin/glutamine synthase-like protein; Swiss-Prot: sp|P38094|FLUG_EMENI Protein fluG; TrEMBL-Plants: tr|I1L922|I1L922_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0085200 | 16 | ||
– | Glutamine synthetase; TAIR: AT5G37600.1 hypothetical protein; Swiss-Prot: sp|Q42899|GLNA1_LOTJA Glutamine synthetase cytosolic isozyme; TrEMBL-Plants: tr|Q84L17|Q84L17_9FABA Glutamine synthetase; Found in the gene: LotjaGi6g1v0055300 | 18 | ||
– | Glutamine synthetase; TAIR: AT5G37600.1 hypothetical protein; Swiss-Prot: sp|Q42899|GLNA1_LOTJA Glutamine synthetase cytosolic isozyme; TrEMBL-Plants: tr|Q84L17|Q84L17_9FABA Glutamine synthetase; Found in the gene: LotjaGi6g1v0055300 | 18 | ||
– | Glutamine synthetase; TAIR: AT5G35630.1 glutamine synthetase 2; Swiss-Prot: sp|Q9XQ94|GLNA2_MEDSA Glutamine synthetase leaf isozyme, chloroplastic; TrEMBL-Plants: tr|Q8GT61|Q8GT61_LOTJA Glutamine synthetase; Found in the gene: LotjaGi6g1v0300700 | 17 | ||
– | Glutamine synthetase; TAIR: AT5G35630.1 glutamine synthetase 2; Swiss-Prot: sp|Q9XQ94|GLNA2_MEDSA Glutamine synthetase leaf isozyme, chloroplastic; TrEMBL-Plants: tr|Q8GT61|Q8GT61_LOTJA Glutamine synthetase; Found in the gene: LotjaGi6g1v0300700 | 17 | ||
– | Glutamine synthetase; TAIR: AT5G35630.1 glutamine synthetase 2; Swiss-Prot: sp|Q9XQ94|GLNA2_MEDSA Glutamine synthetase leaf isozyme, chloroplastic; TrEMBL-Plants: tr|Q8GT61|Q8GT61_LOTJA Glutamine synthetase; Found in the gene: LotjaGi6g1v0300700 | 13 | ||
– | Glutamine synthetase; TAIR: AT5G35630.1 glutamine synthetase 2; Swiss-Prot: sp|Q9XQ94|GLNA2_MEDSA Glutamine synthetase leaf isozyme, chloroplastic; TrEMBL-Plants: tr|Q8GT61|Q8GT61_LOTJA Glutamine synthetase; Found in the gene: LotjaGi6g1v0300700 | 17 |
A list of co-occurring predicted domains within the L. japonicus gene space:
Predicted domain | Source | Observations | Saturation (%) |
---|---|---|---|
SSF55931 | SUPERFAMILY | 1 | 5.00 |