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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0108000 |
| Transcript ID | LotjaGi1g1v0108000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Non-specific serine/threonine protein kinase; TAIR: AT5G58380.1 SOS3-interacting protein 1; Swiss-Prot: sp|Q9C562|CIPKA_ARATH CBL-interacting serine/threonine-protein kinase 10; TrEMBL-Plants: tr|A0A0B2S9N6|A0A0B2S9N6_GLYSO Non-specific serine/threonine protein kinase; Found in the gene: LotjaGi1g1v0108000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:16781148..16784123) extracted from Lotus japonicus Gifu genome v1.2.
TCAGGATTCGACCCTACTCGTGAATGAAAGCATAATGGGCTTACACGTGTTAGGTTCTATTCTTCTCCCCTTTGGGTTGA TAGCAAAATGACCTATCAAAATATATGAATACTAAGGTAATGGTTCTAGTAAATCATTAATATATTCATTTTCAATCATT TCATCTCTCACAATCCTGTATCAAATCTCTACTTCATCTTTTACTCTATGTTGGTGCTTCTAGAATCGCTGTCTTTTCTG TTCACCATCTCAATTCTAAAGGTTAGGTCCCATTATTTATTTATTTTAGTTTATTATTCTGTCAATTTGTCTGCTTCAGT TAGTTGATGTAACATGAACAATACTTTCTGATGATTTTAGCATATAAAATCATCTTGCTATCATACTTGATTTTGAACTT GAAAAACTTTGACTCTGATTTTTTCTTTAGTGAAAGTGTAGCTGAGATGCTGAGTTTTTATAATTCTATCAGTTTCAATC TCTATTTGTGTTATTTGAAACCAATTTATATAGATAAGTAAAATAAATCTGGAATGGTTGTTGTTTGCAGACTTGCAGTC AATTTTGATACAGAATTTTTAAAGGTCATGTATTTTGAGGACAAACCTGGTTACTGCTGGGAGTTCTGTCATGATCATGA ACTCGTGAATTTCTCTGCTGCACTATGATTACTCTTTCATTTTGATTTTTATTTAGTTACTTACCCTCTTAACATAGGTT GTTTATGATGACCTAGCAATCCTGAAGATATATTATGAAATAAAAACAAAACTTTTCTGTGAAACAATTATTGAACTGAG TGTTATTGTTTGTTTGTTTTGCAGACTAGACTCCAAGGAAAGGCATCTTCATAAGTTTTCAGTATACTTCTCAAGTTCCC CTAAAGATTGATCTGTCTCTAAAGATCCATAAGGTTTTGTCCTTGTTAGTAGTGCCTGCTAGGTGCTAGGTAAAATTGGA CCACAAATATCTTCCTCATTCATTCACTACTCCTTGACTCACAGTTAGCACACAAGTTTTTCTTTGTTGTACCTGTTGTG TTCATACATGATCTGTACTAAGAAGGTTGAATTACCTTTCTGCTATTAGATAGTCCTTATGATTGTAAATGATATAGAAA TTTTGACTACCTGAGCAAGTGGTGTTTCATTGCACCCTACTCTGAGGTACCCTATGGAGAATCCATCAAAAATCTTGATG CAAAAATATGAATTAGGAAGATTACTAGGCCAAGGCACATTTGCAAAGGTTTACTATGGAAGAAGCACCATCACTAACCA GAGTGTGGCTGTTAAAGTTGTTGACAAGGATAAAGTTATCAGAACAGGGCAAGTTGATAATATCAAAAGGGAAGTTTCTA TCATGAGACTTGTTAAGCATCCCAACATTATAGAGCTTTTTGAGGTCATGGCCACAAAGGCAAAGATTTACTTTGTTATG GAATATGCCAAAGGTGGAGAACTCTTCAAGAAAGTAGCTAAGGGGAAGCTGAAAGAAGATGTTGCACACAAATATTTCAA GCAGCTAATAAGTGCAGTGGATTTTTGTCACAGTAGAGGTGTGTACCATAGAGACATAAAGCCAGAGAACATTTTGCTTG ATGAGAATGAGAACCTGAAAGTCTCAGATTTTGGGTTGAGTGCTTTAGCTGAAACCAAAAGACAAGATCGTTTGCTTCAT ACAACTTGTGGAACACCTTCATATGTTGCTCCTGAAATCATCAAAAGGAAAGGCTATGATGGCGCCAAAGCTGATATTTG GTCTTGTGGGGTGGTTCTGTTTGTTTTACTTGCAGGTTATGCACCTTTCCATGACCCAAATTTGATGGAGATGTATAGGA AGATAAGCAAAGCAGAGTTTACTTTTCCTCATTGGTTCCCAAAAGATGTGAGGAGATTATTGTGCAAGATGTTGGATCCA AATCCTGACACTAGGATTTCTATAGCTAAGATAATGCAGTGTTCTTGGTTTAAGAAGGGACCAAAATCAAATTGTAGACA GAAAAAACATGAAGGGGGAAACAAGACAGTGGAAACAAATCATTCTGATCAAAGGGATGAGAGTGAGGATGGTGTAGCAG TTGAAGAAACGAGGCAAGAGTCGATTGTTCCTGTGAGTATAAATGCCTTTGATATCATTTCCCTTTCATCTGGTTTTAAT CTATGTGGATTCTTTGAAGACAGCATTCAGAAAAGGGAAGCAAGGTTCACTTCAAGACAACCTGCATCAGTGATCATTTC AAGGCTTGAAGAAATGGCCAAGAGGCTGAAGCTGAAGATAAACAAAAGGGCTTCTGGGTTGTTGAAATTAGAGGGTTCTG ATGAAGGTAGGAAGGGGGTTTTGTCCATTGATGCTGAGATCTTTGAGGTGACTCCATCTTTCCATTTGGTGGAAGTGAAA AAATCAAATGGGGATACATTGGAGTATCAGAGGATATTGAAAGAGGAGGTAAGGCCTGCTCTCAAAGACATTGTTTGGGT TTGGCAAGGTGATCATCAACAAGAGCAATATCAACATTCATTGCAGCAGCAGATACATGAAGAGCAGCAACATCAATCAC AGTGATGGCAGACTCTCAGTTTTGGATATCTCATGCTTTTTGTTAATACATTTCATGGTATGCCAATTTTTCAAAATGTT GCTGTTTCTGGCATATCTTTCAGGTGCACCAATGCAATGAGGTAGCATATCTTGTGTCTCAAATCTGGATGTAGATGGTT AGGTTGAACTTTAATGTATAGTTTTATGGTTAACAACAGTTTCTAGTTGCTTGCCATGTTTTAAATACATGAAGACTGAG TAGTCAAGACTCAAGAGGCATGCTGGCCAAAAAGAACCATATAATAAGTAGATTAATTTCTGTTAATTTTCTCTGGCTAA CAGTTTTTCGTAGTTTCCCTCCTATTCTACTTTGATAGTCATTTCTTCCTTTTTAATAAGAACCTCAAAATTATTATAAA TCAAAATAAAAAAAAT
CDS sequence (LotjaGi1g1v0108000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAATCCATCAAAAATCTTGATGCAAAAATATGAATTAGGAAGATTACTAGGCCAAGGCACATTTGCAAAGGTTTA CTATGGAAGAAGCACCATCACTAACCAGAGTGTGGCTGTTAAAGTTGTTGACAAGGATAAAGTTATCAGAACAGGGCAAG TTGATAATATCAAAAGGGAAGTTTCTATCATGAGACTTGTTAAGCATCCCAACATTATAGAGCTTTTTGAGGTCATGGCC ACAAAGGCAAAGATTTACTTTGTTATGGAATATGCCAAAGGTGGAGAACTCTTCAAGAAAGTAGCTAAGGGGAAGCTGAA AGAAGATGTTGCACACAAATATTTCAAGCAGCTAATAAGTGCAGTGGATTTTTGTCACAGTAGAGGTGTGTACCATAGAG ACATAAAGCCAGAGAACATTTTGCTTGATGAGAATGAGAACCTGAAAGTCTCAGATTTTGGGTTGAGTGCTTTAGCTGAA ACCAAAAGACAAGATCGTTTGCTTCATACAACTTGTGGAACACCTTCATATGTTGCTCCTGAAATCATCAAAAGGAAAGG CTATGATGGCGCCAAAGCTGATATTTGGTCTTGTGGGGTGGTTCTGTTTGTTTTACTTGCAGGTTATGCACCTTTCCATG ACCCAAATTTGATGGAGATGTATAGGAAGATAAGCAAAGCAGAGTTTACTTTTCCTCATTGGTTCCCAAAAGATGTGAGG AGATTATTGTGCAAGATGTTGGATCCAAATCCTGACACTAGGATTTCTATAGCTAAGATAATGCAGTGTTCTTGGTTTAA GAAGGGACCAAAATCAAATTGTAGACAGAAAAAACATGAAGGGGGAAACAAGACAGTGGAAACAAATCATTCTGATCAAA GGGATGAGAGTGAGGATGGTGTAGCAGTTGAAGAAACGAGGCAAGAGTCGATTGTTCCTGTGAGTATAAATGCCTTTGAT ATCATTTCCCTTTCATCTGGTTTTAATCTATGTGGATTCTTTGAAGACAGCATTCAGAAAAGGGAAGCAAGGTTCACTTC AAGACAACCTGCATCAGTGATCATTTCAAGGCTTGAAGAAATGGCCAAGAGGCTGAAGCTGAAGATAAACAAAAGGGCTT CTGGGTTGTTGAAATTAGAGGGTTCTGATGAAGGTAGGAAGGGGGTTTTGTCCATTGATGCTGAGATCTTTGAGGTGACT CCATCTTTCCATTTGGTGGAAGTGAAAAAATCAAATGGGGATACATTGGAGTATCAGAGGATATTGAAAGAGGAGGTAAG GCCTGCTCTCAAAGACATTGTTTGGGTTTGGCAAGGTGATCATCAACAAGAGCAATATCAACATTCATTGCAGCAGCAGA TACATGAAGAGCAGCAACATCAATCACAGTGA
Protein sequence (LotjaGi1g1v0108000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MENPSKILMQKYELGRLLGQGTFAKVYYGRSTITNQSVAVKVVDKDKVIRTGQVDNIKREVSIMRLVKHPNIIELFEVMA TKAKIYFVMEYAKGGELFKKVAKGKLKEDVAHKYFKQLISAVDFCHSRGVYHRDIKPENILLDENENLKVSDFGLSALAE TKRQDRLLHTTCGTPSYVAPEIIKRKGYDGAKADIWSCGVVLFVLLAGYAPFHDPNLMEMYRKISKAEFTFPHWFPKDVR RLLCKMLDPNPDTRISIAKIMQCSWFKKGPKSNCRQKKHEGGNKTVETNHSDQRDESEDGVAVEETRQESIVPVSINAFD IISLSSGFNLCGFFEDSIQKREARFTSRQPASVIISRLEEMAKRLKLKINKRASGLLKLEGSDEGRKGVLSIDAEIFEVT PSFHLVEVKKSNGDTLEYQRILKEEVRPALKDIVWVWQGDHQQEQYQHSLQQQIHEEQQHQSQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 448 | 448 | 1.7E-267 | – | |
| PANTHER | 1 | 448 | 448 | 1.7E-267 | – | |
| Phobius | 1 | 192 | 192 | - | – | |
| Gene3D | 4 | 315 | 312 | 1.5E-102 | – | |
| SUPERFAMILY | 8 | 284 | 277 | 1.62E-91 | ||
| SMART | 12 | 266 | 255 | 7.4E-102 | ||
| Pfam | 12 | 266 | 255 | 3.0E-74 | ||
| ProSiteProfiles | 12 | 266 | 255 | 51.34 | ||
| ProSitePatterns | 18 | 41 | 24 | - | ||
| ProSitePatterns | 130 | 142 | 13 | - | ||
| Phobius | 193 | 212 | 20 | - | – | |
| Phobius | 213 | 463 | 251 | - | – | |
| MobiDBLite | 269 | 304 | 36 | - | – | |
| MobiDBLite | 275 | 304 | 30 | - | – | |
| ProSiteProfiles | 311 | 335 | 25 | 12.552 | ||
| Pfam | 313 | 371 | 59 | 2.9E-22 | ||
| Gene3D | 316 | 436 | 121 | 1.9E-45 | – | |
| CDD | 317 | 431 | 115 | 3.27036E-51 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. | ||
| Biological process | Signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. |
Expression pattern of LotjaGi1g1v0108000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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