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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0116500 |
| Transcript ID | LotjaGi1g1v0116500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ethylene-overproduction protein 1; TAIR: AT3G51770.2 tetratricopeptide repeat (TPR)-containing protein; Swiss-Prot: sp|O65020|ETO1_ARATH Ethylene-overproduction protein 1; TrEMBL-Plants: tr|A0A151RT50|A0A151RT50_CAJCA Ethylene-overproduction protein 1; Found in the gene: LotjaGi1g1v0116500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:18331879..18337115) extracted from Lotus japonicus Gifu genome v1.2.
CAAAACCAAACCACATTCATTGGAGTTGTTCTTTGGAAGAGCGTCACTTTTTCTGTTTCTGTGAAAGCACAAATGGAGTT GTTAGTGGCACTGGTTTTGGTCAACTTTTTGGATTTGGCTCCAAACAAACACACACATAAACCTCTCATTCTGTGGTGAG TCTCAATCTTCTATCCAATTTCCTCTAATACAAGTGATATAAAGCCTCAATTTAACACCTTATAAGCAAAATACAAAAAG ACACTAAGTTCAGTTTAATTAGTCTGTTGTCTTGCATCTCCCACAATCTTTCTTTCTCTTCCTTGCAAAGTGCACACAAC TATGTAAAACATTGCTACCACAAAAGACAACTTTTTTTTTGCTATAAGCTCCATTGTACTCTTTCTCTCCTTGTTTGGAA ACTTTTCTATAATAGTTTCTTAAACCAGGATCAACTCTGGTGAAAAGTTTCTGTAACATGTTTAGAAACCCTTCTGCAAT TGATTCTGAAGGCAGAACCAATTAATTCTGGATAGCTTCGAGTTTCAGAATTGATTCTGTTGAAAGAGAAGCTGATTCAA ACATGCTATAATTAGTTTTTGAGCTTCAGAATTGATTCGGCTTACTTTATAGGGATGCTAAATTTCAGCTCTTTAGCACA AAGGCTTGAAAAGTGAAAACAACATGTATATCCATTGAAAGAACAGAAGCAATGCGTGGCCTGAAGGTCAGTGACATCCT CAATTCCTCAGAAACCAATGGCAGAAAAAACAAAGCTACTGGGGGTGCCACCAGAATCAAAACATTGTTTTCAAAGCCCA AATCCAATAACAACAAGGAAAACTCAACCTCAGCAGTTGCAAACCTTGTTGTTCCTCTTCAACTACCTTCTGCTGACACC CTTGAGCCTTCCATTGAAGCTTACCTTAAACCCCCCAACCTCGTAGAGGCCTTGGCAGAACTGTATCGCTGGCTTGAGTG CTGCCCGCAATCCCAGAAAGCATTGCTCTTTGTGGAGCAGTACTCGCTTCTCCGCAGCCTCGGAGACCAGAAGCTTCTCC GGACTTGTCTCAGAACAGCGCGCCGGAATGCGGATGACGTGTTCTCCAAGGTTGTGCTGTCAGCATGGCTGAGGTTCGAG AGGAGGGAGGACGAGCTTGTGGGCGTCTCTTCAATGGACTGTGCTGGTGGCAGCATTCTTGAATGTCCAAAGTTGAATTT GGTTCATGGATTTAGTCCCAGTTCAGTTAATGATAAGTGTCAGTGTTCACAAGAGACTAAACAGGAAACTAGCAATGAAA GTGTGTGTTTACTAAATGAGGAAAAGGATGTTTCTTTTTGCATTGGAAATGTGGAAATCAAATGTGTTAGGTGGAGAATT GCATCACTATCAGACCCTTTTAAGGCTATGCTCTATGGTGGTTTTGCAGAGTCCAAAATGAGGAAGATTGATTTCACCCA AAATGGGATATGCCCAAAGGGTATGAGAGCAGTGGAATTATACAGCAGGGTAAAAAGATTGGAACTTTTCTGCCCCATGA CTGTTTTGGAGCTTCTTTCATTTGCCAATAGGTTCTGTTGTGAGGAGATGAAGTCTGCTTGTGAGGCCCATTTGGCTTCA ACTGTAGTGAATGTGGATGATGCATTGGCACTTGTTGAGTATGGATTGGAAGAGAAAGCACCTCTTCTTGTAGCTTCATG CTTACAAGTGCTTCTCAGGGAGCTGCCAAATTCTTTGTATAACTCAAAAGTGATAAAAATCTTCTGTAGTCCCGAGGGAA AGAAAAGGTTAGAAACTATGGGGTATGATTCTTTCTTACTCTACTATTTCCTGAGCCAGGTTTCTATGGAGGAAAACATG GTATCTAAGACTACAATGATGTTACTAGAAAGACTTGGGGAGTGTGCAGCTGAAAATTGGCAGAAAGCACTTGCATTCCA TCAATTGGGGTGTGTGAATCTTGAAAGGAAAGAATACCAAGATGCTAGACATTATTTTGAAGTTGCAGCTGAAGCAGGTC ATGTGTATTCTTTGGCTGGTATAGCCAGAACAAAGTATAAACAAAATCAACCATGTTCAGCCTATAAGTTAATCAGTTCT CTCATATTTGAGCATAAACCTGCTGGGTGGATGTACCAGGAGCGTGCTCTTTACAATACCGGATGGGAAAAAAGTTTCGA TTTAGACGTTGCAACTGAACTAGACCCTTCCCTTTCATTTCCTTATAAATATAGAGCATTGGCAAAGGTGGAAGAGAAGC AGATAAAGGCTGGAATCTTAGAGCTTGATAAGATTATTGGATTTAAGCTCTCTCCGGATTGCCTAGAATTGCGAGCTTGG TTGTTTCTTTCACTTGAGGAATATGAGAGTGCCTTGAGAGATGTTCGCGCATTGTTAACTTTGGAACCAAGTTATGTAAC TTCACATGGGAAGATCACAGGGAAATACTTGGTTTATCTACTTAGTCATGTGGTAAGGCAGAAGAGCCAGGCTGAATGCT GGATGCAATTATATGAAGAATGGTCTTCTGTAGATGATGTTGGTTCCTTGGCTATTATACATCAGATGTTAGAGAATGAG CCTGCAAAGAGCCTGCTAGAGTTTCGTCAGTCTCTACTCCTTTTAAGGTAAGCATCTATAAATCCAACCTATCGGTAGTA ACTAGTTTAGAACCCGTTTGGATGCATACCAAAGGGCACTTATTGGAGCAGTACTTTTTTTAGTAGATAAACTTCAATAA ATGCTCTTTAGTCCTTATCCAAACAGGCTCTGAGTATCTCTTCTCTTCAACTTTCAATTTTTATGGTGTTTATTGCACAT TAAAAGGTTATGGTTGGTATTATAATATTTTATTTGTGGAGAGTGTAAGCGCTTCCTGATCTATCTGCACTAGGGTTTTA AATTGCGGCTGCGGTCGCAGTTACCGCTGCATTGAAGAATTGCATACGAATTTCGGTCAAAACAACTGCAATTGCGGTCG CAATGCCATTGTGGGGTGGCCACAATTGTGGTTACTGACCGCAATTTAAAACCCTGTACAATTCAATCCAGTTAAGAAAA TATGATATCAAGAGAATTCCTTACCGTTATGAATTTCATAGGTTAAACTGTCAAAAGGCTGCAATGCGCAGTTTGAGGAT GGCAAGAAACCATTCCAGCTCAATGCAAGAAAGGTTAATATATGAAGGGTGGATTCTATATGATACTGGATACCGGGATG AAGCTCTATCCAGAGCTGATAAGTCCATTGCAATTCAGAGATCATTTGAAGCTTTGTTTCTAAAAGCATATATGTTGGCA GATACAAGTTTGAATCCTGAATCTTCTTCTTATGTAATCCAACTTCTGGAAACAGCACTTAAATGTCCTTCAGATGGTCT TCGCAAAGGACAAGTGAGTTATTTCTACTGCTACTATCCCCCTTACTGATCAAGTTTGTTTTCTGCAGTAATTTGATTGT GTGCTGCAAAATTTTGCAGGCACTGAATAACATGGGGAGCATTTATGTGGATTGTGGAAAGCTTGATCTAGCAAAAGCAT GCTACAAGAATGCCCTGGAAATTAGGCACACAAGAGCTCATCAAGGTCTAGCGCGCGTTTATCATCAGAAAAATCAACGA AAAGCCGCGTATGATGAGATGACGAAGCTAATTGAGAAGGCTGAGAGCAATGCCTCAGCGTATGAGAAACGATCTGAATA CTGTGACCGCGAGATGGCGAAGGCTGATCTTGATTTAGCAACACAACTTGATCCTTTAAGGACATATCCATATAGATTCA GGGCAGCAGGTACTTCACTTATATTTCATTCTTTACCATTTTTCCATTAGGTGAAAACATTACTTGTTAAATCAGGGATT TTACTTACATAAAATGGTCATACATAACCAGTGCTGATGGATGAGCAAAAAGAAACTGAAGCTGTGGAAGAGATCACCAA GGCCATAAACTTCAAGCTTGACATGAAAATACTTCATCTACGAGCAGCGTTTTACGAGTCAATGGGGGACATATCCTCTT CTCTTCAAGACTGTCAGGCAGCTCTATGCTTAGATCCTAACCATACAGAAACACTTGATTTGTATCAAAGGGCACAAAAA CTGAGCTTTTAATCATATACCAATGTGCATAAGAAGGCTGAATGTGTGTTTGGATACCAATCGAGTGCAACGTGAACGGA CTTTCATCTCAATCCAATAGGAAGAGTTTCATTCACTTTTTACCTCGAAGTGAGTGCTAACATCTGATTGCACTGGTGGC AACATATATCCAAACATAGTCATGTAGAGATATCGGTTAGGAAATTGTTGGGGCATCCCAAATTTTTTAAGTTCCAATGG GAGGACATGGATTTTGCAGCTATTGAAACAAAGCCAAAATCCAAGAAGTAGTACTTGGATGATTGGAGAAAAGGGATAAA AAGAAATATGTGCTTCAATTGATCAAATAGGAGAACAATTAAGGTGTACATCAGATTTTCAAAGTACCTACACTGATATG ATACAGATTCTTGTGAGCCATGTGCACATAATTTGTCTCACACTATTTGCAAGTCTCTTGTACAGTTACAGAGTTGTAAT TTATAGAGAGAAAACTCACTTTTTGTTTCCTGCAATGTATGATTTATTATTCTTCTTGATAAGAAGTTTTATCTTTTCTG CATCTTTGGTCCATTCCATAAAGATTCGACAAAGTTGTAAGTTGGTTCTCAACAGCTCAACACAACTCCAATCTTTCCTC CTTATTTAAGCATTTTGCCAAAGAGAAAACAAATAACAAATACTCATAAGGAGCATTTTCCATGCCTAGCATTATAGAAA AAGGAAACACTCATAGATATGGATGTTAGTAAATTTCACTAAGTCTGCTTGAGGAGTTTATACATTTGGAACATCCTCAA AAACCATTATTCTTGTTAATGGCTTCTCAACAGTATCCAGTAAGATTCACAAAATTCTTGTTGTTGACTCTGAGAAATGT TCATATCTGGAAACCTGAAAAGCTAAGTATTAGAACCAAGATGAAAAAGGAGGAGCATTTGCTACACTTGTCGCCATCAA ACCTTCTTTCAGAATTGAGTTTCCATACGTTTTTTTTTACCAGTTTTCAGATTTGGTCACTGCAGAAGAAACCACCGCTA TCTCGGTTCCAACAGAAAAAAGGGCAAGGGCAGCCCGGTGCACAAAACTCCTACGTACGAATGGTCCAAGAACAAGAAGG GGTCCCCTTCTCTCATAAATGAGAATGTGAATGTTGA
CDS sequence (LotjaGi1g1v0116500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCGTGGCCTGAAGGTCAGTGACATCCTCAATTCCTCAGAAACCAATGGCAGAAAAAACAAAGCTACTGGGGGTGCCAC CAGAATCAAAACATTGTTTTCAAAGCCCAAATCCAATAACAACAAGGAAAACTCAACCTCAGCAGTTGCAAACCTTGTTG TTCCTCTTCAACTACCTTCTGCTGACACCCTTGAGCCTTCCATTGAAGCTTACCTTAAACCCCCCAACCTCGTAGAGGCC TTGGCAGAACTGTATCGCTGGCTTGAGTGCTGCCCGCAATCCCAGAAAGCATTGCTCTTTGTGGAGCAGTACTCGCTTCT CCGCAGCCTCGGAGACCAGAAGCTTCTCCGGACTTGTCTCAGAACAGCGCGCCGGAATGCGGATGACGTGTTCTCCAAGG TTGTGCTGTCAGCATGGCTGAGGTTCGAGAGGAGGGAGGACGAGCTTGTGGGCGTCTCTTCAATGGACTGTGCTGGTGGC AGCATTCTTGAATGTCCAAAGTTGAATTTGGTTCATGGATTTAGTCCCAGTTCAGTTAATGATAAGTGTCAGTGTTCACA AGAGACTAAACAGGAAACTAGCAATGAAAGTGTGTGTTTACTAAATGAGGAAAAGGATGTTTCTTTTTGCATTGGAAATG TGGAAATCAAATGTGTTAGGTGGAGAATTGCATCACTATCAGACCCTTTTAAGGCTATGCTCTATGGTGGTTTTGCAGAG TCCAAAATGAGGAAGATTGATTTCACCCAAAATGGGATATGCCCAAAGGGTATGAGAGCAGTGGAATTATACAGCAGGGT AAAAAGATTGGAACTTTTCTGCCCCATGACTGTTTTGGAGCTTCTTTCATTTGCCAATAGGTTCTGTTGTGAGGAGATGA AGTCTGCTTGTGAGGCCCATTTGGCTTCAACTGTAGTGAATGTGGATGATGCATTGGCACTTGTTGAGTATGGATTGGAA GAGAAAGCACCTCTTCTTGTAGCTTCATGCTTACAAGTGCTTCTCAGGGAGCTGCCAAATTCTTTGTATAACTCAAAAGT GATAAAAATCTTCTGTAGTCCCGAGGGAAAGAAAAGGTTAGAAACTATGGGGTATGATTCTTTCTTACTCTACTATTTCC TGAGCCAGGTTTCTATGGAGGAAAACATGGTATCTAAGACTACAATGATGTTACTAGAAAGACTTGGGGAGTGTGCAGCT GAAAATTGGCAGAAAGCACTTGCATTCCATCAATTGGGGTGTGTGAATCTTGAAAGGAAAGAATACCAAGATGCTAGACA TTATTTTGAAGTTGCAGCTGAAGCAGGTCATGTGTATTCTTTGGCTGGTATAGCCAGAACAAAGTATAAACAAAATCAAC CATGTTCAGCCTATAAGTTAATCAGTTCTCTCATATTTGAGCATAAACCTGCTGGGTGGATGTACCAGGAGCGTGCTCTT TACAATACCGGATGGGAAAAAAGTTTCGATTTAGACGTTGCAACTGAACTAGACCCTTCCCTTTCATTTCCTTATAAATA TAGAGCATTGGCAAAGGTGGAAGAGAAGCAGATAAAGGCTGGAATCTTAGAGCTTGATAAGATTATTGGATTTAAGCTCT CTCCGGATTGCCTAGAATTGCGAGCTTGGTTGTTTCTTTCACTTGAGGAATATGAGAGTGCCTTGAGAGATGTTCGCGCA TTGTTAACTTTGGAACCAAGTTATGTAACTTCACATGGGAAGATCACAGGGAAATACTTGGTTTATCTACTTAGTCATGT GGTAAGGCAGAAGAGCCAGGCTGAATGCTGGATGCAATTATATGAAGAATGGTCTTCTGTAGATGATGTTGGTTCCTTGG CTATTATACATCAGATGTTAGAGAATGAGCCTGCAAAGAGCCTGCTAGAGTTTCGTCAGTCTCTACTCCTTTTAAGGTTA AACTGTCAAAAGGCTGCAATGCGCAGTTTGAGGATGGCAAGAAACCATTCCAGCTCAATGCAAGAAAGGTTAATATATGA AGGGTGGATTCTATATGATACTGGATACCGGGATGAAGCTCTATCCAGAGCTGATAAGTCCATTGCAATTCAGAGATCAT TTGAAGCTTTGTTTCTAAAAGCATATATGTTGGCAGATACAAGTTTGAATCCTGAATCTTCTTCTTATGTAATCCAACTT CTGGAAACAGCACTTAAATGTCCTTCAGATGGTCTTCGCAAAGGACAAGCACTGAATAACATGGGGAGCATTTATGTGGA TTGTGGAAAGCTTGATCTAGCAAAAGCATGCTACAAGAATGCCCTGGAAATTAGGCACACAAGAGCTCATCAAGGTCTAG CGCGCGTTTATCATCAGAAAAATCAACGAAAAGCCGCGTATGATGAGATGACGAAGCTAATTGAGAAGGCTGAGAGCAAT GCCTCAGCGTATGAGAAACGATCTGAATACTGTGACCGCGAGATGGCGAAGGCTGATCTTGATTTAGCAACACAACTTGA TCCTTTAAGGACATATCCATATAGATTCAGGGCAGCAGTGCTGATGGATGAGCAAAAAGAAACTGAAGCTGTGGAAGAGA TCACCAAGGCCATAAACTTCAAGCTTGACATGAAAATACTTCATCTACGAGCAGCGTTTTACGAGTCAATGGGGGACATA TCCTCTTCTCTTCAAGACTGTCAGGCAGCTCTATGCTTAGATCCTAACCATACAGAAACACTTGATTTGTATCAAAGGGC ACAAAAACTGAGCTTTTAA
Protein sequence (LotjaGi1g1v0116500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRGLKVSDILNSSETNGRKNKATGGATRIKTLFSKPKSNNNKENSTSAVANLVVPLQLPSADTLEPSIEAYLKPPNLVEA LAELYRWLECCPQSQKALLFVEQYSLLRSLGDQKLLRTCLRTARRNADDVFSKVVLSAWLRFERREDELVGVSSMDCAGG SILECPKLNLVHGFSPSSVNDKCQCSQETKQETSNESVCLLNEEKDVSFCIGNVEIKCVRWRIASLSDPFKAMLYGGFAE SKMRKIDFTQNGICPKGMRAVELYSRVKRLELFCPMTVLELLSFANRFCCEEMKSACEAHLASTVVNVDDALALVEYGLE EKAPLLVASCLQVLLRELPNSLYNSKVIKIFCSPEGKKRLETMGYDSFLLYYFLSQVSMEENMVSKTTMMLLERLGECAA ENWQKALAFHQLGCVNLERKEYQDARHYFEVAAEAGHVYSLAGIARTKYKQNQPCSAYKLISSLIFEHKPAGWMYQERAL YNTGWEKSFDLDVATELDPSLSFPYKYRALAKVEEKQIKAGILELDKIIGFKLSPDCLELRAWLFLSLEEYESALRDVRA LLTLEPSYVTSHGKITGKYLVYLLSHVVRQKSQAECWMQLYEEWSSVDDVGSLAIIHQMLENEPAKSLLEFRQSLLLLRL NCQKAAMRSLRMARNHSSSMQERLIYEGWILYDTGYRDEALSRADKSIAIQRSFEALFLKAYMLADTSLNPESSSYVIQL LETALKCPSDGLRKGQALNNMGSIYVDCGKLDLAKACYKNALEIRHTRAHQGLARVYHQKNQRKAAYDEMTKLIEKAESN ASAYEKRSEYCDREMAKADLDLATQLDPLRTYPYRFRAAVLMDEQKETEAVEEITKAINFKLDMKILHLRAAFYESMGDI SSSLQDCQAALCLDPNHTETLDLYQRAQKLSF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 25 | 25 | - | – | |
| MobiDBLite | 8 | 22 | 15 | - | – | |
| PANTHER | 20 | 910 | 891 | 0.0 | – | |
| PANTHER | 20 | 910 | 891 | 0.0 | – | |
| Gene3D | 199 | 343 | 145 | 3.2E-14 | – | |
| SUPERFAMILY | 203 | 302 | 100 | 2.12E-9 | ||
| CDD | 206 | 288 | 83 | 8.91509E-30 | – | |
| SUPERFAMILY | 402 | 572 | 171 | 2.92E-8 | ||
| SMART | 406 | 439 | 34 | 130.0 | ||
| ProSiteProfiles | 406 | 439 | 34 | 6.018 | ||
| ProSiteProfiles | 535 | 568 | 34 | 6.992 | ||
| ProSiteProfiles | 535 | 568 | 34 | 7.239 | ||
| SMART | 535 | 568 | 34 | 5.1 | ||
| Gene3D | 628 | 800 | 173 | 2.2E-15 | ||
| SUPERFAMILY | 663 | 861 | 199 | 1.29E-15 | ||
| ProSiteProfiles | 735 | 768 | 34 | 8.789 | ||
| SMART | 735 | 768 | 34 | 0.0016 | ||
| ProSiteProfiles | 735 | 768 | 34 | 8.231 | ||
| Pfam | 736 | 764 | 29 | 7.4E-5 | ||
| Coils | 780 | 807 | 28 | - | – | |
| Gene3D | 811 | 911 | 101 | 6.8E-10 | ||
| ProSiteProfiles | 864 | 897 | 34 | 7.523 | ||
| ProSiteProfiles | 864 | 897 | 34 | 7.947 | ||
| SMART | 864 | 897 | 34 | 0.25 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0116500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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