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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0116800 |
| Transcript ID | LotjaGi1g1v0116800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Exocyst complex component, putative; TAIR: AT5G58430.1 exocyst subunit exo70 family protein B1; Swiss-Prot: sp|Q9FGH9|E70B1_ARATH Exocyst complex component EXO70B1; TrEMBL-Plants: tr|G7JZR6|G7JZR6_MEDTR Exocyst subunit exo70 family protein; Found in the gene: LotjaGi1g1v0116800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:18353112..18360327) extracted from Lotus japonicus Gifu genome v1.2.
CTCTCTTCTCTAACTCTCTCTTACACTATGTTTGGTAGGGTAGAGAGAGATAGAGAAGAGAGAGTAGAGAAGAGAGAGAT TGAGTAGAGAGAAATATGTGAGAAATAGAGTGGATTTAAGAGGTTGTTTGGTATGATAGTGATACAGGAGAGAGAGATGA GAAATAATGAGGTGGAAGAGAGAGAAAAGATTAACTTTAGATTAAAATAATATTTTTTTGAAAAAAAGTAACAAAGTGGG GGTTAAAAACCGCCACTAAGTTGGCTAAAAGTAGAAAAAAAAATAAAAAAATGCAGCCCACGGTTACTGTTCAATTTCTC TCCAAATTGGAGAGACTCCAAAAAGGGGTGGTCCCCACCTCTACAACCCCCTCCTCCCTCCCTCCTCTCTCCCACCAAAC AAGGATGCTTCCCCCATCTCTCTCCTATCTCTCTCTCTTGCATCTCTCTCTCTTCTATCTCTCTCCTAACAAACAAAGCA TTATAGTCTTATACCAAACAAAGTGTAAGTCTCTCCTCTCTAACCCTCCATTTCCAAAATCAATTATACCAAACAATGTG TAAGTGTGGGTGTAAATGTACTGTAAACTAAACTTTTTCCACAATTTTTTGTCAATGGCTCAATGCACTTGACAGCAAGT ATGGTCCACAACAGACGGGTAAAGAAACTATCACTGGAGGGACCGGGCAGGGACAGAAATTAGAGACCGAAGAATTTCCA TCTCTTTTGGGTGATTAAATACATGGGTGTTGGATAGTTTCTTCGAAATTTCATTGAATAGCTCTTGGCCCTTTCTTCGA AAATTCATTTGAAAGTTGAGGAAAGTTTCTCATCCAAATCTATAAAATGGTTGGCCTTTGTATAATTCAGTGTGAAACCA ATTCTTGCTCAGTTCAAAGAGAACATGACACGCTGGCTAATCCAGATTCTGAGTTGGCTGATGCAGCCAAATGTTTGGAG ATTTGTGAGTTTTGCTTCAGCTGTTGTTGGACTGCTCTGTAATGCTCTGAGCTCTTCCTTCAACCATCTATTTGGAGATT GGACTTTCTTTAAGATATCTCTTTATAGTGTTTTCAGCGTTATCATGTCCCTCATGATGTTGTTTGCAAAGAAATGGAGA CATTCTAGAAGTCTGCAGTTCAAAGCTCACTTGGCATTTTTGGTCTTGACCATCACCTCACTCTATTCATTTATCTCTGA TAAAGTGATGAATGGGAAACCAGATGTATACAGCCTGATTTCATGTGCTGCTTTTGCTATCATGTCACTCAGCATATCAA GGCAAATCCAGTGCGGTTTCGAAGTTGATCTTCTGTATTTCTTTCTGGGATGTCTAATGGTACAACTCATGAAAACTAAA TTGGTGTTAGTTATTGTTGGAGCAGGGTTCAGCTATTCACTTATTGTCCTTCGTTCTTCCTTTTCTTCCATTGACGGATT ACCCAAAATTGATCACATTCCTGCACCTCAAGAAGAGCCTTCCATAGACATTTTAGTCGATTCACAACATCTTGCCCGTA CTGATATTGCTAGTGTCACGCAGCAGCTCTCTACTCATTTGAAGGACCTTCAACAACATGATTCAAATCTCCGGAAATTG CTTTTGGAGCGGGTGAAGGAATACCTTGAACATAACTCTGAACTGGTGGCGACGGACCACAACTTCATCATCGATGCACT GCCATCAGAGACTTTGAATAAATTTCACAAAACTGCCAAGTTGATGGTGGAAGCGGGATTTGAGAAGGTGTTCTTCGCCG TGTACAGCAGCTGGCGGGAGGAATGGTTGAAGAATCTATTGGGGGACACTCACAAGATGGCATGGCAGGACCTCAAAGAC GAGACTGGATTTGGAAGATGGGTTAAGGCATCCAACGTAGCTCTCAAGATACTGTTCCCCAACGAGCGGCAACTTTGTGA CCGTATCTTATTGGGATTCTCATCTGCTGCCGATTTCTCCTTCACAGAAGTTTGCAGGGGATCGGTCATTCAGCTACTAA ATTTTGCTGATGTTGTCGCCATCGGTAAACGCTCACTGCAGCGGTTGTCAAGAATCCTAGAGGTGTTCGAGACGTTGACT GAACTGATTCCTGAGTACGAGTCTTTGTTTTGTGATCAGTACAGTTTGTCACTCAGGAACAAAGCAATCACGATTTGGAA GAGATTGGGAGAAGCAATCAGGGGCATTCTCAATGTGTTGGAGAGTTTGGTCTGGCGTGATCCAGCAAAGGAAGCTGCTC CCGGTGGCGCAGTTCATCCATTTACCCGCTACGTGATGTACTACCTCCAAGAAACTTGCCGGTCCTGGCAGACCCTAGAA AAGGTATTTGAAAACTACTCACTCTCCGCGCAGATGCATTGGATTATAGAGCTATTAGAGAGCAATCTAGAAGCAAAGTC CACGTTCTACAAAGACCCTGCTGTAGGCTTTGTTTTCTTGATGAATAACGGTGATTATATAGTTCAGAAGGCCAAAGATA GTGAATTGGGAACGCTTTTGGGGGATGATTGGATACAAAAGCATACTACTAAAGTTCGACAATACCTTTTGCAATTTCGA AGAACCATGACAAAGCAAAGTGCTGCAACTTCAGTGCAGGATTTGCCTGGCAGGTAACAGCCTCTCAATAGGTGCTAATG ATTAACACATCCTCACGATTCAAGTTCCGTTGAATACTTCCTGTTAATTACACTGCTCTTAAATCATATCATTTTGTAGA TCTTACTACAACCCCGATGCTTAATACAATTCTATTAAAGAATAGTAAATTCTTCGACACTGACCACATTAATTAGCAGA ACGAAGAATGCTCCGGAAAGAACAGTGAGGTTTCCCGCACCACAGGTTGGAGACCTAGGGATGCCACCCGAAGATGGTTT TACTTGGAGAAAATATGGCCAGAAAGTAATACATGCCTCCAAGTACCCCAGGTATATTACTAATTGAAACATAAACTGAA ACACTGTCTTGGTAACATAAATTGAAACACCACTAATAAGTAATAACAGCCGTCCACAAAATATTCCAACAATCATAAGG TAGTAGCATGTAGAATTTAAGAGTCTCAATTCAAAGTGACCTTTGTATTAAATTTGCACATTCCAAATCTAAAAATCTGT AACAAGTCTCAGAAATGTCAAATTCATGCTCACGTTATGAATATATTGGTGCCCCTTCACATTAAATTGACTACTTAATG ACAAATTGATAGCAGAAGACTAATAGCCCATTTTCAATTATATATTTCCTTTCATGGTTTGAAATGTTTCTTCCTTTCCA GAAATTACTACCGGTGCACCCGTCAGAAGTGCCTAGCCAAGAAGCGAGTACAACGACTTGATGACACTCCGGAAATATAT GAAGTAACATACCGAAATGAACATACCTGCTACATGTCCTTAGCAGAACCATCGTTGCTTCTACCATCACAACAAGTGGA TATCTCAAAATACATGACTCAACCCACCATGTCCCTCCAGTTTTCTCCATCATCATCTTCAGTTTCAGGGCAATCTTTCA AGAACCTTGTCCAGCAGCTTAGCGGTTCTGGTAGCACTGGTGGCGGTGTTGGGCCCTCTACTTCAGAATATAGTACTGAT TATCCGATAGCAGATATGGTTGATGCTATGTTCACCTCTAGTTGTAGCAATGTCAGCAGTGTTGCATCTTTTGTTCCATT TGCTGAAGATAAATGGGAACCAGGTTAGAAGAAAAGCTTAACAATGTAGCAGTTAATTTTATCTTGAATCCCGTTAGAAG TCCTGCATTGGCTAGAGATATTTGTGTTGAGTTAGGTCTCCCAAATTCTTATTTATTGTGGAGACCTCCCATATTTGGAC CACCAGTTGATGTTCATTTCAAGCTCCAGATGCCTAGCTCTAAAGTTTAGAGCAACCCTCAACTCTTTAGCTAGCTTTTG GGTTGAACCTCCCTAATTTTAATAAATCCATTTACCTAAAATTTTCTATTAATTTACAGACATCATTCTTTAGCAAAGTA ACAACGTAGTTTCATGCATACGGTAAATTGTTATATCTCATTGTTTTGGCCTGAAAAACAAAAAGGTTGCGCGCATGGAT GCAAGCATTTGGTGATAAATATCAGAGTGATTTTTGTGTTAGCCACCACACACAAAATAACTTTATTGGCATTTTCTTAT AATTGAGGTCGATTGAAATCCGTACATGTTTTAACTAGTTTAGAAGTTCTACTTATAAAATGTAAATGCTTCAGATAAAA AATATGTATTGCAAACTTATATACAATATTTTATAGGAAAACTAAACTACTTTGTGTTATTCTGTGATAAAATTTTATTT TGAGTAAAATAAGCAACTTTGTTCATAATTACATCTTAAAAACGGTATATGTCTGTGAAAGCAATTCTTACTCAGCAGAT TTGAAGATCAACTTATTGTTGGAGCATGTTTATAAATTAAATAAAAGTTACTTATTGTTGGAGCATGTTTATATATTCCT TCTTCATTCTCTCTTCTTTTACACAGATGGTGCACCTGAAAATGAACATTCTGAAGTCATTGAAGTCGATTCACCACAAT TGGTCAGTACTGATATTGCTGGCATGATGCAACAACTCTCAAATTGTATGAAGGGGCTTCAGCAGCACGATTGTAAACTC ACCAACATACTTTTGATGCCAAAGGAACACGTCGACGATAAGTCTATGCTACTTAGGACCGACATTAACTTCGTGATCGA TGCACTGCCATCGGAACGTATCAACAGCCTCCACAAAACAGTGAAACTGATGGTGGCCTCAGGGTTTGAGGAAGAATGCT CCAAGGTGTACAGTAGTTGGCGAAGGAGATGGTTGGAAGAGTGCTTGATAAATAAATTATTAGAGTTGCAAGAGAATGAG ATAGAGAATGAACATGAAAAGAAGACATGTTTGGATAAAAGGGTTGAGAGATGGATTGAAGCTTCCCAGGTTGCTCTATT GATACTATTTCGTGAATGGCGACTCTGCAATCGTATCTTCTCAGGGTTCTCCTCTGCTGCTGATAGTTGTTTCACACAAG TTTGTCAAGGGCCCATGATTCAGATGCTGAATTTTGCTGCTGCAGTTGCAGACGGAAGTCCTTCGGCATATCGTTTGTTC AAAATCCTTGACATGTTTATGACATTAAATGCTCTGATTCCAGAGTTCCAATCCTTATTGTTTCCTAATCCGTTGGTGAA TGAAGCAATAGCAGTCCAAAACAGATTAGGAGAAGCAAGCCGGGACCTTTTCATGGAATTTGAGATTCTGGTTTTCGATA TTCCAGAGGTCAAGCTACTTGCACCGCCCAATGGTGGGCATCATCCCATGATGAACAACATCGTGGCCTACCTTAATTCT GCTTACAGGTCACAACAGATCCTGGAGCAAATTCTACAACAATACCCCAAGGTAGCTACAGGAGCTGAAACATCTTCCTT CATGACGCAGATGAAGCGGACATTGAAGCTGCTAGAGAAAACACTGGTAGAGAAATCCGAAAACTACAAGGACCCTGCTT TACCCTACTTCTTCATGATGAATAATTGGAGGCTCATAGAAGTGGCACTAGGAACCATGTATGGCCATGATTTGTTCCAA AATAACAGAGCAAAAGTCCAAAAAAATCTTGAACAATATCGAGGAAGCTCATGGAATAAGATGCTGGACATTTTGAAGGT TGAAAGCAATGAATCAGAGGCACCCAATGTTGCAGCAGATTTAATGAAAGACAAGCTCAATTTGTTCAACATGCACTTCG AGGAGATATGCAGAGTTCAGTCTACATGGTCTGTCATTGATGAGCAGCTCAGGGAAGAAATAAGGATATCTGTGAACGAT ATTTTGTTGCCTGCATATGGGAACTTCATTGGGAGATTTCAGGATGTTCTTGGTAAGCATGCTTATGAGTATATTGAGTA TGGATTGTTTGACATTGAAGATAGCCTCAACTATTTATTTGTTGGAGCCAAGCCGATGAAATCAATAGCTGAAACAGAAG GAAAGGACTGAAAGGCTACCCAAATCTGATGCGAAGAATGCAAGTATTTTTCAGGGTTTAGGATTTTATTGATTGGTGTT TTTCTTTTCAGAACAAAGAAATTTTATTTATCTGATTCTGATGAAATCTAGTACATCCTACTCAGATAGCAAGGAACCTC TATAACTCTGATAAAAACTGTAAACTGCTATAGAATATCACCTAAATAACCTCCATAAACCAGTGATGGTTTACTATCCC TTAAAAGTTTTTAAAAAAAAAACTACTATTATAAATCACCTATATATTAATGACCATCAGAAAACAAGTTTTTATTCCTT AAATACTGAATTTTACTAGTTAAAGAAGACAAAATCTTCAATGTCAAACAAGATATGATGAAGATCCAATAAGCATACCT CCAGGCTGCACATGCTTTCCTGCAGAAGAATATCCAGGAAGCATTAGATTTCGGTGAATAGACATTGGAGAAGTATGTTT CTATCTAACATTAAATTGCAATTTGCAAAAGTATGTGCAATGAATCACCATTCAAATAGAAAAAATTGTATCACCAATCA CCCTGATAAAATAAATCAAAGTAAGTAAAACAGAAACATTTTCAAATTCGGACGAATTATAATAGTCTACAATCTACATA ATCTAATAAATATGAGGGATTATAAATTGTGAGACCTCATTCCTGAATCTAGGTCAATACCACTGAGCTGGTTTTGACCA TTGCTACTCAAAATCATTAAGCTCAGCAAGTTTCTATCTCATAACTAAACTAAACCCTGTAATAATTGGAGATTGGGGAA CTGAATTCATTCAACAAAAGAAAAGACAAGAGGATGGGAAAATCAGAGAATGTATACTTAATGGATCCAACTGGAAAGGT AAGAATGGGGAAAATGCGAGTTTTTTTAGCAGAAGGCAGTGAAATTGGTGAGTGAAGAGAGGTACACCTACCTATCAGCG TAGCGTGAGTGTTGAGCGTCGCTTTGTGGAGGTGGTGGATGAATTTGACAATCCAATATTCAATTAGTTAAGCGCCATAA ACGTTTTAGAGAATTTAAGGGTTCGTTAGGAGATTGTTAGGGAAGATATGAGAATGTGAGAGGGAGTTTCCCGAGATGAC GATCATAGTGATTATGTTTGGGTTCTTCCATTGTTGAGTGAGTTTCCATCTTGTTGATGGCTCTTTTGACTAGTAGTCAC GTTCAAATGAGACATC
CDS sequence (LotjaGi1g1v0116800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACACGCTGGCTAATCCAGATTCTGAGTTGGCTGATGCAGCCAAATGTTTGGAGATTTGTGAGTTTTGCTTCAGCTGT TGTTGGACTGCTCTGTAATGCTCTGAGCTCTTCCTTCAACCATCTATTTGGAGATTGGACTTTCTTTAAGATATCTCTTT ATAGTGTTTTCAGCGTTATCATGTCCCTCATGATGTTGTTTGCAAAGAAATGGAGACATTCTAGAAGTCTGCAGTTCAAA GCTCACTTGGCATTTTTGGTCTTGACCATCACCTCACTCTATTCATTTATCTCTGATAAAGTGATGAATGGGAAACCAGA TGTATACAGCCTGATTTCATGTGCTGCTTTTGCTATCATGTCACTCAGCATATCAAGGCAAATCCAGTGCGGTTTCGAAG TTGATCTTCTGTATTTCTTTCTGGGATGTCTAATGGTACAACTCATGAAAACTAAATTGGTGTTAGTTATTGTTGGAGCA GGGTTCAGCTATTCACTTATTGTCCTTCGTTCTTCCTTTTCTTCCATTGACGGATTACCCAAAATTGATCACATTCCTGC ACCTCAAGAAGAGCCTTCCATAGACATTTTAGTCGATTCACAACATCTTGCCCGTACTGATATTGCTAGTGTCACGCAGC AGCTCTCTACTCATTTGAAGGACCTTCAACAACATGATTCAAATCTCCGGAAATTGCTTTTGGAGCGGGTGAAGGAATAC CTTGAACATAACTCTGAACTGGTGGCGACGGACCACAACTTCATCATCGATGCACTGCCATCAGAGACTTTGAATAAATT TCACAAAACTGCCAAGTTGATGGTGGAAGCGGGATTTGAGAAGGTGTTCTTCGCCGTGTACAGCAGCTGGCGGGAGGAAT GGTTGAAGAATCTATTGGGGGACACTCACAAGATGGCATGGCAGGACCTCAAAGACGAGACTGGATTTGGAAGATGGGTT AAGGCATCCAACGTAGCTCTCAAGATACTGTTCCCCAACGAGCGGCAACTTTGTGACCGTATCTTATTGGGATTCTCATC TGCTGCCGATTTCTCCTTCACAGAAGTTTGCAGGGGATCGGTCATTCAGCTACTAAATTTTGCTGATGTTGTCGCCATCG GTAAACGCTCACTGCAGCGGTTGTCAAGAATCCTAGAGGTGTTCGAGACGTTGACTGAACTGATTCCTGAGTACGAGTCT TTGTTTTGTGATCAGTACAGTTTGTCACTCAGGAACAAAGCAATCACGATTTGGAAGAGATTGGGAGAAGCAATCAGGGG CATTCTCAATGTGTTGGAGAGTTTGGTCTGGCGTGATCCAGCAAAGGAAGCTGCTCCCGGTGGCGCAGTTCATCCATTTA CCCGCTACGTGATGTACTACCTCCAAGAAACTTGCCGGTCCTGGCAGACCCTAGAAAAGGTATTTGAAAACTACTCACTC TCCGCGCAGATGCATTGGATTATAGAGCTATTAGAGAGCAATCTAGAAGCAAAGTCCACGTTCTACAAAGACCCTGCTGT AGGCTTTGTTTTCTTGATGAATAACGGTGATTATATAGTTCAGAAGGCCAAAGATAGTGAATTGGGAACGCTTTTGGGGG ATGATTGGATACAAAAGCATACTACTAAAGTTCGACAATACCTTTTGCAATTTCGAAGAACCATGACAAAGCAAAGTGCT GCAACTTCAGTGCAGGATTTGCCTGGCAGGTAA
Protein sequence (LotjaGi1g1v0116800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTRWLIQILSWLMQPNVWRFVSFASAVVGLLCNALSSSFNHLFGDWTFFKISLYSVFSVIMSLMMLFAKKWRHSRSLQFK AHLAFLVLTITSLYSFISDKVMNGKPDVYSLISCAAFAIMSLSISRQIQCGFEVDLLYFFLGCLMVQLMKTKLVLVIVGA GFSYSLIVLRSSFSSIDGLPKIDHIPAPQEEPSIDILVDSQHLARTDIASVTQQLSTHLKDLQQHDSNLRKLLLERVKEY LEHNSELVATDHNFIIDALPSETLNKFHKTAKLMVEAGFEKVFFAVYSSWREEWLKNLLGDTHKMAWQDLKDETGFGRWV KASNVALKILFPNERQLCDRILLGFSSAADFSFTEVCRGSVIQLLNFADVVAIGKRSLQRLSRILEVFETLTELIPEYES LFCDQYSLSLRNKAITIWKRLGEAIRGILNVLESLVWRDPAKEAAPGGAVHPFTRYVMYYLQETCRSWQTLEKVFENYSL SAQMHWIIELLESNLEAKSTFYKDPAVGFVFLMNNGDYIVQKAKDSELGTLLGDDWIQKHTTKVRQYLLQFRRTMTKQSA ATSVQDLPGR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 36 | 36 | - | – | |
| Phobius | 1 | 19 | 19 | - | – | |
| PANTHER | 12 | 554 | 543 | 8.3E-172 | – | |
| PANTHER | 12 | 554 | 543 | 8.3E-172 | ||
| TMHMM | 20 | 42 | 23 | - | – | |
| Phobius | 20 | 31 | 12 | - | – | |
| Phobius | 32 | 36 | 5 | - | – | |
| Phobius | 37 | 45 | 9 | - | – | |
| Phobius | 46 | 67 | 22 | - | – | |
| TMHMM | 46 | 68 | 23 | - | – | |
| Phobius | 68 | 78 | 11 | - | – | |
| Phobius | 79 | 96 | 18 | - | – | |
| TMHMM | 81 | 98 | 18 | - | – | |
| Phobius | 97 | 107 | 11 | - | – | |
| TMHMM | 108 | 125 | 18 | - | – | |
| Phobius | 108 | 124 | 17 | - | – | |
| Phobius | 125 | 135 | 11 | - | – | |
| Phobius | 136 | 164 | 29 | - | – | |
| TMHMM | 137 | 159 | 23 | - | – | |
| Phobius | 165 | 570 | 406 | - | – | |
| Gene3D | 197 | 569 | 373 | 1.1E-96 | – | |
| SUPERFAMILY | 231 | 553 | 323 | 1.31E-69 | ||
| Pfam | 318 | 554 | 237 | 2.0E-60 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Exocyst | A protein complex peripherally associated with the plasma membrane that determines where vesicles dock and fuse. At least eight complex components are conserved between yeast and mammals. | ||
| Biological process | Exocytosis | A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle. Exocytosis can occur either by full fusion, when the vesicle collapses into the plasma membrane, or by a kiss-and-run mechanism that involves the formation of a transient contact, a pore, between a granule (for exemple of chromaffin cells) and the plasma membrane. The latter process most of the time leads to only partial secretion of the granule content. Exocytosis begins with steps that prepare vesicles for fusion with the membrane (tethering and docking) and ends when molecules are secreted from the cell. |
Expression pattern of LotjaGi1g1v0116800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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