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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0124300 |
| Transcript ID | LotjaGi1g1v0124300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Disease resistance protein; TAIR: AT3G14470.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q7XBQ9|RGA2_SOLBU Disease resistance protein RGA2; TrEMBL-Plants: tr|G7K723|G7K723_MEDTR Disease resistance protein RGA4; Found in the gene: LotjaGi1g1v0124300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:19703923..19708993) extracted from Lotus japonicus Gifu genome v1.2.
CTAAGTCATAGCACAGTTTATAAATTTATTGTGCAGATCTGGATCTTAAAATCAAAGAGCCTCCAAACTCTTCATGACTA GATCTAATGTCAACATTGAATGATTTATATTTTGAAAGGTAAGTTCACCAGGTACGCCAACCTAAACAATTACTTGTCAA CTATGAATTGTTTATCGGTTATTGGTTAAGACATCACATGCATGCTTCATGCTTCATGACTGGTTCCAATGGCTGTCCCT ATCTTCCTAGAAGTTTCTTTAAACAAACACTGCATTAATTAATTTAATACTTTATATCTTTTTTCTTTCATTGGTGCCTG TTGACCAGCTATTTGAAGAGTTTTGCTTGCATTGTATCCATACTCATCTTTTGCTCCAGAGCTCATCCTAGCAAACTCAA TCTCTGATATTCTTCCCTTTTCAACTTTTCAATTTCTGAAAATGACTGAGGCCTTACTTGGTGTTGTGTTTGAGAATTTG CTCTCTCTCGTTCAGAATGAATTTGCAACCATTTCAGGAATCAAAGGAAAAGCTGAAAAGCTATCACACGATTTAGATCT GATCAAGGGAGTTCTTGAAGATGCTGAGAAGAAACAATTAACAGATAGAGCTGTCATGGTTTGGCTGCAGCAACTCAAAG ATGCTGTCTACGTGCTTGATGATATTCTTGATGAATGTTCCATAGAATCCCTTCGACTTGGGGGATTGTCCTCTTTCAAA CCAAAGAGCATCATTTTTCGCCGTGAGATTGGCAACAGGCTGAAAGATATTACAAGGAGGTTTGAAGAGATTGCTGAAAG GAAGAAGAACTTTATCCTGCGAGATGTTGATAGGGAAAGGCAAGCTGAAGTGGCTGAGTGGCGCGAAACCAGCTCAATCA TTCCCCAACCAAAAGTATATGGACGACAAGATGATAAGGAGAAGATTGTGGAGTTTCTTCTCAGCCAAGCTCCGGGTTCT GACTTCCTTTCCATATATCCGATCGTTGGCTTGGGTGGAATAGGAAAAACAACACTTGCTCAGATGGTCTACAATGATGA AAGGGTAACAAGCAGTTTTAACACAAAAATTTGGATTTGTGTTTCTGAGAATTTCTCTGTCAAAAGGATTTTGTGTTCCA TTATAGAATCTATTACAAAGGAAAAGGTTGATGCCTTGAACTTAAATGTAATAGAAGGAAAAGTCCAAGAATTGTTGCAA AGTAACAGATATTTGCTGATTTTAGATGATGTGTGGAAACAAAATCAAGAATTGAAGTTCGGATTAAGCCAAGACAAATG GAACAAGTTAAAATCTGTATTGTCATGTGGATACAATGGTGCTTCCATTTTAGTATCCACTCGTGATATGGATGTTGCAG AACTCATGGGAACATGCCAAGCTCATCATTTGGGCGGTCTCTCTGAGGATGAATGCTTGTTGTTATTCAAGCAATATGCA TTTGGAGCTAACAAAGAAGAACGTGCAGAGCTTGTAGCTATAGGCAAGGAGATAGTAAAGAAGTGTGGGGGGTCACCTCT TGCAGCACAAGTATTAGGAGGTCTGTTGCACTCAAGGAGTGAGAAAATTGAATGGCTTGAGGTCAAAGAAAGTAGACTTT GGAATTTATATGGTGAAAATTCTATTTTTCCTGCCTTGAGGTTGAGCTTCTTTTATTTAACACCAACTTTAAAGCGATGT TTTTCTTTCTGTGCAATATTTCCTAAAGATATGGAAATTGAAAAGGAAGATCTGATCCATCTTTGGATAGCCAATGGGTT TATCTCATCAAGGGAAAACATGGAAGCAGAAGATGTTGGTAATATGATTTGGAATGAATTGTACCAAAAATCATTCTTCC AAGATATAGAGTTGGATGATAATTCAAGTGTCATTTGTTTCAAGATGCATGATCTTGTTCATGATCTTGCTCAATCAGTA ATGGGACAAGAGTGTGTGATATTGGAGAATGCAAACCTGACAAATTTGTCAACAAGCACACACCATGTTGTTTTTTTGTC TAGTGAAGATGGATTATCATTCAAGGGAACCTTCGAGAGAGTTGAATCCTTGCGAACATTATATGAGTTGGTACTCGGCC TCACAAAAATTTATGGTAACCTTCCAATACATCGCTCTCTTCGAGTATTACGCACAAGTTCTTTCAATTTATCATCACTG GGGAGTTTAATTCATTTGAGGTACTTGGGGCTTTATAACCTTCAAATAAAAACATTGCCCAAGTCAATTTATAGCTTGCG AAAATTGGAAATCTTGAAATTGCAATTTTTGGCCAACCTAATCTCTCTACCAAAACACTTGACTCGCTTACAGAATTTGA GACATCTTGTCATTGAAGGTTGTGATTCATTGTCTTGTATGTTCCCTAACATAGGAAAATTGTCCTGCCTGAGAACATTA AGCATATACATTGTCAGTTCAAAGATTGGGCATAGCTTGGCAGAATTACATAATTTAAAACTCGGAGGACATCTGCACAT CAAAGGCCTTGAAAATGTTGGCAGTTTATCTGAAGCCCAAGAGGCCAATTTGAAGGCTAAAAGAGATCTTCACGAATTAT TCTTGTCATGGGGTAGCAGTGAGGAAACCAAGTCACATGCTACTAACCCTGATCAAGTACTTGAAACGCTTCAACCTCAC TCAAATCTCAAGAAATTGAGAATATATGGCTATGCAGGATTAAAATCCCCAAGTTGGATTGGAATGCTCAGCAGTTTAGT TGATCTTCAACTTCATCATTGCAATGAGTGCATCCAACTTCCATCCCTTGGTAAATTGCCATCTTTAAGAAAACTTAGAT TATGGCATTTGAATAATATACAGTGCTTGAATGATGATGAATGTAACGATGGTGTGGAGGGGAGAGCTTTCCCATCTTTG GAGGAACTCTCATTAGATGAGTTGCCAAAGTTAGAGATGTTGTTGAAAACGAAAAGAGGAGAAATGTTCCCCAGTCTTTC CCATTTGTACATTAACAGTTGTCCTAAACTTGAGTTGACATGCATTCCATCACTTCAAAGTCTTGAGTTAGTGGGTTATA CCAATGAGTTACTGAGATCCGTCTCTAGTTTCACTAATCTTACCTCCCTTAAACTTTGTTTGGGCAAAGAAGGCCTGCTA TCATTCCCAGTGGGAACATTGACTTGTCTTCGAACTTTGAAGATATTTTATTTCAGGAGATTGACGGAATTACCAGATGA ATTCTTCAATAACCTCAATACTTTGGAGCATCTGGAAATCAGTAGTTGTTTTGAGTTGGAGTGTTTACCGGAACAAGGCT GGGAAGGTCTTCACTCCCTTCGAACTCTGGAGTTTGATGACTGCAGACAATTGAGATCCTTGCCGGATGGCGTTCGACAC CTCACTTCACTTGAGTGTCTGACTATTACGGGATGCCCAACATTAGAGGAGCAGTGTAAGGAGGGAACCGGAAAGGATTG GGACAAAATACAACATGTTCCACGAGTGATAATTGAATGATGAAGATGCAGAAGAGTGAGTGATGATTCAACTTATTTAT TCTTTTCTTATCTGCCTCTTCATTCCCATTTGCTCCTCGATTGCACCCAATGCAGTCTAGCTAGGCAGATTAATAATCTC TTGTATGTGTGTTGCAGGATATATATGCCACTCTCGGCCCGGGTTTTGACTCTTCAATAGGTCAGTGTTGAGTTGAGATA CCTCTCGCATTTGGATCAGTGTGAATTTTGTAAATTGTGATTACATCTAAGTTTTTGCTTCAACCACATGATTATAAAAT GAATGTTGTTGAACTATTTGTAAAATTTCGTTTCCTTGTTTCCAATTTTCCCTTGCTTGGTCAGTACAATATTGTCACGT GAATAAGATGAATGTTGTAGATGGTCTATATTGGGCAGTAATACGTAGTGAGAGTATCTTGTACGTGTTTGCATTCTTGT GAGTGAGCATTTCATCCACTTCAGTGGTTGCCTTGACTTAAGTATGCATTCAAAACAGTATATATGTTGCCAATGAATTA AGAGCTTTTTTTTATTACTTTGAGATTGTGTTTGTTTAAGAGAAGGGTTGAAATGCCTCAAACAAACAAAGGCTAAGGAA TTTTATCCCTAATTTTTTTAGGCTTAATACATCAGAAGGCCCCTGGAATTGTAAAGGGAATCAAATCCAGGGCCTAGAAA AATTTTGCATCAAATTGGGTCCCTCGAAATTTTTTTTTAATTCAATTAAGTACAAAGTGTGCCAGCCTTCAATTTTATCC CAGTCATCAATTCCACGTGGCATTTATTATTATTTTTTAATTAAAAAAACAAAAAAAATAATTTTTAATTCCAACTCAAT TATTAAGTCAGAAAAAAAATTTACAAAAATTAATAAAAACCTAATCTAATAATCCCTAACCTAAATAAAAACCTAATCTA AAACACAAAAACTAAATCTATTCACCATTATCTTTATCATTCTCTCATCATCTTCATCCTCTTACAACAACAAAAATCCA AAATAACAAATATCATCATCTTCATCACACAAGGATGGTTCACGCAAATTACATCATCATCTTCAACCGATGCACCACCG CGCTCCTCCTTCGTTTCCGAGCTCCACGCCGCTGCTGCGTTTCTCTGCTTCAAAGCCTCCATCCCAGAATCTTCTTCCTC TCTCAGAGCTTCAATCTGGGTTTTTTTTCCTCAGTAGCATTACAGGGTAGGGGAAAGGGACACAAGGGGTTTTGGGTCAG AAACCAGAGTTACGAACAAAGTGGCTCTGTTCCACTAGATGCAGAAACACAAGACCCAAAACCTGCACCAGGCCCAGCAA AATTGAACATGAGAAAATCCAGCAGCTGCTACCACCAACATGACCTAATCCCCCGCCGCCATCTCCTTCCCTCAACCCTG GTCCCTAACCATACCCATGTCAGATCCGTCACACACCACCATCTCCTTCCCTCAACAAATCCGCCGCCGCCTCCATCTCC TCTCTTTCTGGATCAATCACCGCTCCATGGGTCACCGGTCACCGTCGCAGGAGATGTAATCCCAAAGCGGGGTGCCATAT GGGTCACCACCTTGTTCCGGCCACAGGAGAA
CDS sequence (LotjaGi1g1v0124300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACTGAGGCCTTACTTGGTGTTGTGTTTGAGAATTTGCTCTCTCTCGTTCAGAATGAATTTGCAACCATTTCAGGAAT CAAAGGAAAAGCTGAAAAGCTATCACACGATTTAGATCTGATCAAGGGAGTTCTTGAAGATGCTGAGAAGAAACAATTAA CAGATAGAGCTGTCATGGTTTGGCTGCAGCAACTCAAAGATGCTGTCTACGTGCTTGATGATATTCTTGATGAATGTTCC ATAGAATCCCTTCGACTTGGGGGATTGTCCTCTTTCAAACCAAAGAGCATCATTTTTCGCCGTGAGATTGGCAACAGGCT GAAAGATATTACAAGGAGGTTTGAAGAGATTGCTGAAAGGAAGAAGAACTTTATCCTGCGAGATGTTGATAGGGAAAGGC AAGCTGAAGTGGCTGAGTGGCGCGAAACCAGCTCAATCATTCCCCAACCAAAAGTATATGGACGACAAGATGATAAGGAG AAGATTGTGGAGTTTCTTCTCAGCCAAGCTCCGGGTTCTGACTTCCTTTCCATATATCCGATCGTTGGCTTGGGTGGAAT AGGAAAAACAACACTTGCTCAGATGGTCTACAATGATGAAAGGGTAACAAGCAGTTTTAACACAAAAATTTGGATTTGTG TTTCTGAGAATTTCTCTGTCAAAAGGATTTTGTGTTCCATTATAGAATCTATTACAAAGGAAAAGGTTGATGCCTTGAAC TTAAATGTAATAGAAGGAAAAGTCCAAGAATTGTTGCAAAGTAACAGATATTTGCTGATTTTAGATGATGTGTGGAAACA AAATCAAGAATTGAAGTTCGGATTAAGCCAAGACAAATGGAACAAGTTAAAATCTGTATTGTCATGTGGATACAATGGTG CTTCCATTTTAGTATCCACTCGTGATATGGATGTTGCAGAACTCATGGGAACATGCCAAGCTCATCATTTGGGCGGTCTC TCTGAGGATGAATGCTTGTTGTTATTCAAGCAATATGCATTTGGAGCTAACAAAGAAGAACGTGCAGAGCTTGTAGCTAT AGGCAAGGAGATAGTAAAGAAGTGTGGGGGGTCACCTCTTGCAGCACAAGTATTAGGAGGTCTGTTGCACTCAAGGAGTG AGAAAATTGAATGGCTTGAGGTCAAAGAAAGTAGACTTTGGAATTTATATGGTGAAAATTCTATTTTTCCTGCCTTGAGG TTGAGCTTCTTTTATTTAACACCAACTTTAAAGCGATGTTTTTCTTTCTGTGCAATATTTCCTAAAGATATGGAAATTGA AAAGGAAGATCTGATCCATCTTTGGATAGCCAATGGGTTTATCTCATCAAGGGAAAACATGGAAGCAGAAGATGTTGGTA ATATGATTTGGAATGAATTGTACCAAAAATCATTCTTCCAAGATATAGAGTTGGATGATAATTCAAGTGTCATTTGTTTC AAGATGCATGATCTTGTTCATGATCTTGCTCAATCAGTAATGGGACAAGAGTGTGTGATATTGGAGAATGCAAACCTGAC AAATTTGTCAACAAGCACACACCATGTTGTTTTTTTGTCTAGTGAAGATGGATTATCATTCAAGGGAACCTTCGAGAGAG TTGAATCCTTGCGAACATTATATGAGTTGGTACTCGGCCTCACAAAAATTTATGGTAACCTTCCAATACATCGCTCTCTT CGAGTATTACGCACAAGTTCTTTCAATTTATCATCACTGGGGAGTTTAATTCATTTGAGGTACTTGGGGCTTTATAACCT TCAAATAAAAACATTGCCCAAGTCAATTTATAGCTTGCGAAAATTGGAAATCTTGAAATTGCAATTTTTGGCCAACCTAA TCTCTCTACCAAAACACTTGACTCGCTTACAGAATTTGAGACATCTTGTCATTGAAGGTTGTGATTCATTGTCTTGTATG TTCCCTAACATAGGAAAATTGTCCTGCCTGAGAACATTAAGCATATACATTGTCAGTTCAAAGATTGGGCATAGCTTGGC AGAATTACATAATTTAAAACTCGGAGGACATCTGCACATCAAAGGCCTTGAAAATGTTGGCAGTTTATCTGAAGCCCAAG AGGCCAATTTGAAGGCTAAAAGAGATCTTCACGAATTATTCTTGTCATGGGGTAGCAGTGAGGAAACCAAGTCACATGCT ACTAACCCTGATCAAGTACTTGAAACGCTTCAACCTCACTCAAATCTCAAGAAATTGAGAATATATGGCTATGCAGGATT AAAATCCCCAAGTTGGATTGGAATGCTCAGCAGTTTAGTTGATCTTCAACTTCATCATTGCAATGAGTGCATCCAACTTC CATCCCTTGGTAAATTGCCATCTTTAAGAAAACTTAGATTATGGCATTTGAATAATATACAGTGCTTGAATGATGATGAA TGTAACGATGGTGTGGAGGGGAGAGCTTTCCCATCTTTGGAGGAACTCTCATTAGATGAGTTGCCAAAGTTAGAGATGTT GTTGAAAACGAAAAGAGGAGAAATGTTCCCCAGTCTTTCCCATTTGTACATTAACAGTTGTCCTAAACTTGAGTTGACAT GCATTCCATCACTTCAAAGTCTTGAGTTAGTGGGTTATACCAATGAGTTACTGAGATCCGTCTCTAGTTTCACTAATCTT ACCTCCCTTAAACTTTGTTTGGGCAAAGAAGGCCTGCTATCATTCCCAGTGGGAACATTGACTTGTCTTCGAACTTTGAA GATATTTTATTTCAGGAGATTGACGGAATTACCAGATGAATTCTTCAATAACCTCAATACTTTGGAGCATCTGGAAATCA GTAGTTGTTTTGAGTTGGAGTGTTTACCGGAACAAGGCTGGGAAGGTCTTCACTCCCTTCGAACTCTGGAGTTTGATGAC TGCAGACAATTGAGATCCTTGCCGGATGGCGTTCGACACCTCACTTCACTTGAGTGTCTGACTATTACGGGATGCCCAAC ATTAGAGGAGCAGTGTAAGGAGGGAACCGGAAAGGATTGGGACAAAATACAACATGTTCCACGAGTGATAATTGAATGA
Protein sequence (LotjaGi1g1v0124300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTEALLGVVFENLLSLVQNEFATISGIKGKAEKLSHDLDLIKGVLEDAEKKQLTDRAVMVWLQQLKDAVYVLDDILDECS IESLRLGGLSSFKPKSIIFRREIGNRLKDITRRFEEIAERKKNFILRDVDRERQAEVAEWRETSSIIPQPKVYGRQDDKE KIVEFLLSQAPGSDFLSIYPIVGLGGIGKTTLAQMVYNDERVTSSFNTKIWICVSENFSVKRILCSIIESITKEKVDALN LNVIEGKVQELLQSNRYLLILDDVWKQNQELKFGLSQDKWNKLKSVLSCGYNGASILVSTRDMDVAELMGTCQAHHLGGL SEDECLLLFKQYAFGANKEERAELVAIGKEIVKKCGGSPLAAQVLGGLLHSRSEKIEWLEVKESRLWNLYGENSIFPALR LSFFYLTPTLKRCFSFCAIFPKDMEIEKEDLIHLWIANGFISSRENMEAEDVGNMIWNELYQKSFFQDIELDDNSSVICF KMHDLVHDLAQSVMGQECVILENANLTNLSTSTHHVVFLSSEDGLSFKGTFERVESLRTLYELVLGLTKIYGNLPIHRSL RVLRTSSFNLSSLGSLIHLRYLGLYNLQIKTLPKSIYSLRKLEILKLQFLANLISLPKHLTRLQNLRHLVIEGCDSLSCM FPNIGKLSCLRTLSIYIVSSKIGHSLAELHNLKLGGHLHIKGLENVGSLSEAQEANLKAKRDLHELFLSWGSSEETKSHA TNPDQVLETLQPHSNLKKLRIYGYAGLKSPSWIGMLSSLVDLQLHHCNECIQLPSLGKLPSLRKLRLWHLNNIQCLNDDE CNDGVEGRAFPSLEELSLDELPKLEMLLKTKRGEMFPSLSHLYINSCPKLELTCIPSLQSLELVGYTNELLRSVSSFTNL TSLKLCLGKEGLLSFPVGTLTCLRTLKIFYFRRLTELPDEFFNNLNTLEHLEISSCFELECLPEQGWEGLHSLRTLEFDD CRQLRSLPDGVRHLTSLECLTITGCPTLEEQCKEGTGKDWDKIQHVPRVIIE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | 3 | 119 | 117 | 2.52234E-14 | ||
| Pfam | 6 | 97 | 92 | 4.2E-21 | ||
| PANTHER | 22 | 794 | 773 | 6.8E-176 | – | |
| PANTHER | 22 | 794 | 773 | 6.8E-176 | – | |
| Coils | 31 | 51 | 21 | - | – | |
| Gene3D | 133 | 314 | 182 | 3.8E-36 | – | |
| SUPERFAMILY | 138 | 417 | 280 | 4.86E-66 | ||
| Pfam | 156 | 383 | 228 | 8.8E-50 | ||
| PRINTS | 178 | 193 | 16 | 9.3E-18 | – | |
| PRINTS | 251 | 265 | 15 | 9.3E-18 | – | |
| PRINTS | 355 | 369 | 15 | 9.3E-18 | – | |
| Gene3D | 397 | 492 | 96 | 5.1E-6 | ||
| SUPERFAMILY | 481 | 850 | 370 | 9.18E-30 | – | |
| Gene3D | 493 | 697 | 205 | 1.1E-15 | ||
| Gene3D | 698 | 862 | 165 | 1.5E-18 | ||
| SUPERFAMILY | 811 | 1005 | 195 | 1.36E-17 | – | |
| PANTHER | 856 | 982 | 127 | 6.8E-176 | – | |
| PANTHER | 856 | 982 | 127 | 6.8E-176 | – | |
| Gene3D | 867 | 1006 | 140 | 6.7E-14 | ||
| PRINTS | 923 | 939 | 17 | 9.3E-18 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of LotjaGi1g1v0124300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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