Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0146800 |
| Transcript ID | LotjaGi1g1v0146800.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Transporter-related family protein; TAIR: AT1G78130.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q9GQQ0|SPIN_DROME Protein spinster; TrEMBL-Plants: tr|I1MAS9|I1MAS9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0146800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:24956505..24960413) extracted from Lotus japonicus Gifu genome v1.2.
AAAAAGACTACCTTGTTGGCACCCTATACCCTCTCAAATCAACCCATCTGGCATCTTACATCAACTCCAGTCCCACCCAT CAAAGACTAAAATAGCAAACACAAACCGCCACAAAAATAAACTAACGAACGCCAAACTGGACTCACTGCCACCGTCTCAC GAATCAATCAAACCAACAACAAAGGATTCCAAGATCCACATCACCCACCACCAACCACATTTAGCAGCTAAAATACCGTG TCTGAAACTCCAACTGTAATAATAATCAAGAAGAAGAAGAAGAAGATGGTGAAGATGAAGATGAAGATGAAGATGAAGGC GGAGATGGTGACACTGGTGCTGGTGAACCTGGCGGGGATCATGGAGAGAGCCGACGAGTCACTCCTTCCCGGCGTGTACA AGGAAGTCGGCACAGCGCTTCACACTGACCCCACTGGACTTGGTTCTCTGACTCTGTTTCGCTCCATCGTGCAATCTGCG TGCTACCCTGTTGCTGCGTACCTCGCCACGCGCCATAACCGGGCCCACGTCATCGCGCTCGGTGCTTTTCTCTGGGCTGC CGCCACTTTCCTTGTCGGCTTCTCCTCCACCTTCTTTCAGGTCACCGCTCAATTCTCTCTTCTTCTTGTTCTTGTTGCTG CCCAATACGGCGTCGTTTAGGGATCGGAAGTTCTTCATAGCTAAAATGAAAATGATCATATCGGAAATTCTTAACAGAAT TGCAAATTGCGTTGAATCATGTCATTCAAATTGCATTCTCAATTTTTTTTTAGTAGACGAAAAATGAATATCCCTTTGAA TCGAAGGAAAAATTCTGGGGTTTACATAATTAGACCATTGCTGTTATTTAGACATTTATAGTTTCTATTAAATATAGAAA CATTCATTTATCCCTTACCCAACAACTTAGTGTCTGTTTAGTTTTCAGTTAAGTGATTTCATCCAACGGAGGTCCAAAGC TTCTTTCACGTTTGAGGCATTGGAATATTGGAATGTGTGATCTCAAATTTCAATGCTCCTAACAGACTTCGAAACTGAAA ATCAAACACAGCCTTAAGCTTTTGGGATAATTGGTTGTCTGATAGTTTAAATATGGTTGAATGTTAATGGAGGAAGGGAA AGGCAAAGAACTGTGTTCACCAGCTTTCAAAGAATGCGCGGTACAAGGTTTCGTAACACGCGAAACGTGAAAGAAACTCG GTTGAGGTTTAGTTTGGTTCAACTTAAAACCAAACATGCACGCCTATAGGTGTGAAAAGAATGTCTCTAAATTATAGCCT CAATTGACCTATACATGTTACAAAATAAAAGGCGTAAAACATTAGGCTTGATTCATTTACATGAAAGTGTTCAGAAATGT ATAAGAAATTAGTGTTCAAGACTCAAGACCACTGGAATTTCGAAATAACATGTTGGCATTTTTTTGCTTTTGGATTTGGC AGTAGGCACATATATGAAGTTCTTAAAGTAGTTTCTGTGTAACTGCTACCCTTTTGTAGATATACAGCTGATTGAATTCA CTTTGAACTTTGAAGTCATTGTATTATAGGTAGCTGTATCGCGAGGTTTAAATGGAATTGGCCTGGCACTAGTCACACCT GCAATTCAATCCCTTGTTGCTGACTCAACTGATGATAACAATCGCGGCATGGCTTTCGGATGGCTTCAACTAACAGGCAA TCTTGGCTCAATTATTGGTGGCCTCTTCTCAGTGTTGATAGCTCCATATACAGTGTTTGGTATCGCTGGTTGGAGAATTT CCTTTCATATTGTTGGAGTAATAAGCATTATAGTTGGTGCTTTAGTGTACCTCTTTGCCAACGATCCACACTTTTCGGAT AACGGTACAGATAATCGCAATCAAGCTCCGAACAAAACATTTTGGTCAGAAGTAAGAGATCTGGTCCAGGAAGCCAAGTC AGTATCGAAGATTTCATCTTTCCAGATCATTGTCGCACAAGGTGTCACTGGCTCATTTCCGTGGTCTGCTTTGTCATTTG CGCCGATGTGGTTAGAGCTCACCGGATTCTCCCACAAGACAACGGCATTCCTCATAGCTTTATTTGTTATCGCCAGTTCT ATTGGGGGTTTGTTTGGAGGTAAGATGGGGGATATCCTCTCCAGGCGTTTTCCGAATTCTGGGAGGATTATTCTTTCACA GATAAGCTCTGGATCAGCAATCCCCCTAGCAGCACTTCTTCTGCTGGGTTTACCGGATGATCCGTCTACAGCAATACCTC ATGGTTTGATTCTAATCATTATGGGGCTCTTCATATCTTGGAATGCTCCAGCTACAAACAAGTATGTGTTTCAAACTAGC CACTTTTATGTTTGCTTCATCATTTTGCCTTTCATTTATCCTTATTTCGTATAGTATTTGCCACAAACATTCTGAAAATA TGCGTCACACCTTCCAACTTTTGTTAAAATAAAAATTATTAAGCTTACATATTATTCAGTATGTTGCAACAAGTTGGTGG TCTCTCATTGGTCAAACATGTGTGAGTACCAATATAAAGTCCTCTTTAGGCTTGTGGCTCTTGACCTTGGAATGGGACTT GCAACCTAAAAAATTAGAGTTGAATAGAGAAAAATGATATGAATAGGTATCCTCAATTAGCTCTGAACAGTCCAAATAAG TTCAACTTTTCAAGTTACTTTTTTAACACAGTTTTTAAATTAGTACTAATTTGCATGGTTTTTGAACATCTTTATCAATA GTTTGTGTTTACTTTGTGGCTTTATGCAAACCATTCTGTGTATGAAATAGTGCATAGGATACCTTGTTTCTTTTATTGTG ATTTAGAACTGGAAAAAGAGCTCTGTGTGATTCTAGTAAAGCTTATTCAAGTTATGTGTTGATGCATAGGCTAATTTGTC AACTGTCTGGGCATTAGTCCAATTTTCGCAGAGATAGTTCCAGAGAGAGCGCGAACAAGTGTATATGCCTTGGACCGATC TTTTGAGTCTATACTATCATCATTTGCTCCCCCCACAGTGGGGATTTTGGCTCAGCATGTTTATGGGTATAAGCCTATTC CTGAAGGATCCAGTGAATCTCTCGAGATTTCAACAGATAGAGAGAATGCTGCATCATTGGCCAAGTCTCTTTACACAGCA ATAGGAATTCCAATGGCTCTGTGCTGTTTAATCTACTCATTTCTTTATAAGACCTATCCAAGAGACCGGGAACGAGCGAG GATGGAGGTTTTAATAGAATCAGAGATGCAGCAAATTGAATCAGATGGGTTAGCCATTGATAAAGAGATTGCCTCAGAAG AACTGTCTATTAGGGATTATGATGGTGATGGTGTTGATCTTGATCTTGATGATGAAGAGAACATATTGCTCTATAGGCAG TTAACATTCTCCAACTTAGGTGACTAGTTAACTCAAAAGATATTGACAAAATTTAGAGGGTCTTTTTCCAACTTTGGATG AGCTTATTTTTCATGGAATCAATTCTTGCACTTAAAAGTTACTCACAGTAATTTCTCCCCAGAATTGATTTTACATGCAA AATCCATCATAGAATGATTTTCAAATATGCTTTCACTGGTGGAGAATTTTTCAGAACTACATTTTGATCAATTTTTTGCA TAAATCAAACTCGGACACTAATAGAAGAAACGGTACACACCATCATAGTTTTATCTTCCACTTCTTGGGGGAAGATTTTC TTTTGTTCTATGTATTTTGATTATGTAAAATGTAAAACCTTGGATAGCAATGAATGTACATTTCTCGGTTTTGGCTTATG TAATTGACATTTTGATTTGTTAAATATCAAGTATAGTGCAAAAATTGTTTAATAATCCCAGTGCATAAATCATTGACATT TGTTGAAGGGTAAGGTATTTCTACCTGTGCTCATCCTGGTTCCTAGACCTAATTATCAAATTTATGTTT
CDS sequence (LotjaGi1g1v0146800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGAAGATGAAGATGAAGATGAAGATGAAGGCGGAGATGGTGACACTGGTGCTGGTGAACCTGGCGGGGATCATGGA GAGAGCCGACGAGTCACTCCTTCCCGGCGTGTACAAGGAAGTCGGCACAGCGCTTCACACTGACCCCACTGGACTTGGTT CTCTGACTCTGTTTCGCTCCATCGTGCAATCTGCGTGCTACCCTGTTGCTGCGTACCTCGCCACGCGCCATAACCGGGCC CACGTCATCGCGCTCGGTGCTTTTCTCTGGGCTGCCGCCACTTTCCTTGTCGGCTTCTCCTCCACCTTCTTTCAGGTAGC TGTATCGCGAGGTTTAAATGGAATTGGCCTGGCACTAGTCACACCTGCAATTCAATCCCTTGTTGCTGACTCAACTGATG ATAACAATCGCGGCATGGCTTTCGGATGGCTTCAACTAACAGGCAATCTTGGCTCAATTATTGGTGGCCTCTTCTCAGTG TTGATAGCTCCATATACAGTGTTTGGTATCGCTGGTTGGAGAATTTCCTTTCATATTGTTGGAGTAATAAGCATTATAGT TGGTGCTTTAGTGTACCTCTTTGCCAACGATCCACACTTTTCGGATAACGGTACAGATAATCGCAATCAAGCTCCGAACA AAACATTTTGGTCAGAAGTAAGAGATCTGGTCCAGGAAGCCAAGTCAGTATCGAAGATTTCATCTTTCCAGATCATTGTC GCACAAGGTGTCACTGGCTCATTTCCGTGGTCTGCTTTGTCATTTGCGCCGATGTGGTTAGAGCTCACCGGATTCTCCCA CAAGACAACGGCATTCCTCATAGCTTTATTTGTTATCGCCAGTTCTATTGGGGGTTTGTTTGGAGGTAAGATGGGGGATA TCCTCTCCAGGCGTTTTCCGAATTCTGGGAGGATTATTCTTTCACAGATAAGCTCTGGATCAGCAATCCCCCTAGCAGCA CTTCTTCTGCTGGGTTTACCGGATGATCCGTCTACAGCAATACCTCATGGTTTGATTCTAATCATTATGGGGCTCTTCAT ATCTTGGAATGCTCCAGCTACAAACAATCCAATTTTCGCAGAGATAGTTCCAGAGAGAGCGCGAACAAGTGTATATGCCT TGGACCGATCTTTTGAGTCTATACTATCATCATTTGCTCCCCCCACAGTGGGGATTTTGGCTCAGCATGTTTATGGGTAT AAGCCTATTCCTGAAGGATCCAGTGAATCTCTCGAGATTTCAACAGATAGAGAGAATGCTGCATCATTGGCCAAGTCTCT TTACACAGCAATAGGAATTCCAATGGCTCTGTGCTGTTTAATCTACTCATTTCTTTATAAGACCTATCCAAGAGACCGGG AACGAGCGAGGATGGAGGTTTTAATAGAATCAGAGATGCAGCAAATTGAATCAGATGGGTTAGCCATTGATAAAGAGATT GCCTCAGAAGAACTGTCTATTAGGGATTATGATGGTGATGGTGTTGATCTTGATCTTGATGATGAAGAGAACATATTGCT CTATAGGCAGTTAACATTCTCCAACTTAGGTGACTAG
Protein sequence (LotjaGi1g1v0146800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVKMKMKMKMKAEMVTLVLVNLAGIMERADESLLPGVYKEVGTALHTDPTGLGSLTLFRSIVQSACYPVAAYLATRHNRA HVIALGAFLWAAATFLVGFSSTFFQVAVSRGLNGIGLALVTPAIQSLVADSTDDNNRGMAFGWLQLTGNLGSIIGGLFSV LIAPYTVFGIAGWRISFHIVGVISIIVGALVYLFANDPHFSDNGTDNRNQAPNKTFWSEVRDLVQEAKSVSKISSFQIIV AQGVTGSFPWSALSFAPMWLELTGFSHKTTAFLIALFVIASSIGGLFGGKMGDILSRRFPNSGRIILSQISSGSAIPLAA LLLLGLPDDPSTAIPHGLILIIMGLFISWNAPATNNPIFAEIVPERARTSVYALDRSFESILSSFAPPTVGILAQHVYGY KPIPEGSSESLEISTDRENAASLAKSLYTAIGIPMALCCLIYSFLYKTYPRDRERARMEVLIESEMQQIESDGLAIDKEI ASEELSIRDYDGDGVDLDLDDEENILLYRQLTFSNLGD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 29 | 29 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 11 | 11 | - | – | |
| Phobius | 1 | 14 | 14 | - | – | |
| Gene3D | 7 | 201 | 195 | 4.6E-31 | – | |
| PANTHER | 9 | 514 | 506 | 3.7E-269 | – | |
| PANTHER | 9 | 514 | 506 | 3.7E-269 | – | |
| SUPERFAMILY | 14 | 454 | 441 | 4.45E-52 | ||
| Phobius | 15 | 25 | 11 | - | – | |
| ProSiteProfiles | 16 | 450 | 435 | 21.501 | ||
| CDD | 17 | 442 | 426 | 1.43746E-81 | – | |
| Pfam | 22 | 387 | 366 | 4.5E-41 | ||
| Phobius | 26 | 29 | 4 | - | – | |
| Phobius | 30 | 52 | 23 | - | – | |
| Phobius | 53 | 75 | 23 | - | – | |
| Phobius | 76 | 81 | 6 | - | – | |
| TMHMM | 80 | 102 | 23 | - | – | |
| Phobius | 82 | 104 | 23 | - | – | |
| Phobius | 105 | 109 | 5 | - | – | |
| TMHMM | 106 | 128 | 23 | - | – | |
| Phobius | 110 | 129 | 20 | - | – | |
| Phobius | 130 | 140 | 11 | - | – | |
| Phobius | 141 | 163 | 23 | - | – | |
| TMHMM | 141 | 163 | 23 | - | – | |
| Phobius | 164 | 174 | 11 | - | – | |
| TMHMM | 173 | 195 | 23 | - | – | |
| Phobius | 175 | 195 | 21 | - | – | |
| Phobius | 196 | 237 | 42 | - | – | |
| Gene3D | 233 | 454 | 222 | 1.2E-14 | – | |
| TMHMM | 238 | 260 | 23 | - | – | |
| Phobius | 238 | 259 | 22 | - | – | |
| Phobius | 260 | 270 | 11 | - | – | |
| TMHMM | 270 | 292 | 23 | - | – | |
| Phobius | 271 | 289 | 19 | - | – | |
| Phobius | 290 | 309 | 20 | - | – | |
| TMHMM | 305 | 327 | 23 | - | – | |
| Phobius | 310 | 327 | 18 | - | – | |
| Phobius | 328 | 332 | 5 | - | – | |
| Phobius | 333 | 351 | 19 | - | – | |
| TMHMM | 337 | 359 | 23 | - | – | |
| Phobius | 352 | 426 | 75 | - | – | |
| TMHMM | 380 | 399 | 20 | - | – | |
| Phobius | 427 | 445 | 19 | - | – | |
| TMHMM | 427 | 446 | 20 | - | – | |
| Phobius | 446 | 518 | 73 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0146800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…