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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0172900 |
| Transcript ID | LotjaGi1g1v0172900.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like protein kinase; TAIR: AT4G18250.1 receptor Serine/Threonine kinase-like protein; Swiss-Prot: sp|P93604|LRK10_WHEAT Rust resistance kinase Lr10; TrEMBL-Plants: tr|I3ST45|I3ST45_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0172900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:32886707..32887161) extracted from Lotus japonicus Gifu genome v1.2.
ATGAGGATCTTGCACTTCGACATTAAGCCTCATAATATTCTTCTTGATGAGAACTTCACTCCAAAAGTTTCGGATTTTGG GCTGGCAAAGCTCTACCCAACTGATAACAGCATTGTGACCCTCACAGCTGCAAGAGGAACCATGGGGTACATGGCACCTG AGTTGTTCTACAAGAACATTGGAGGCGTTTCATACAAGGCAGATGTTTATAGCTTTGGAATGTTGTTGATGGAAATGGCG AGCAGGAGAAAGAACATGAACGAGCGCGTGGATCGTCCAAGCCAGGTTTATTTTCCTTCTTGGGTTTACCAGCAATTCAG TGAAGGGAAGGAAATAGAAATGGGGATAAATGCTGTAGAGGAGGACAGGACAATTCTGAAGAAGATGATATTAGTTGCTT TGTGGTGCATACAGATGAAGCCTAGTGATCGACCTTCAATGAACAGAGTGGTTGA
CDS sequence (LotjaGi1g1v0172900.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGGATCTTGCACTTCGACATTAAGCCTCATAATATTCTTCTTGATGAGAACTTCACTCCAAAAGTTTCGGATTTTGG GCTGGCAAAGCTCTACCCAACTGATAACAGCATTGTGACCCTCACAGCTGCAAGAGGAACCATGGGGTACATGGCACCTG AGTTGTTCTACAAGAACATTGGAGGCGTTTCATACAAGGCAGATGTTTATAGCTTTGGAATGTTGTTGATGGAAATGGCG AGCAGGAGAAAGAACATGAACGAGCATGAAGCCTAG
Protein sequence (LotjaGi1g1v0172900.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRILHFDIKPHNILLDENFTPKVSDFGLAKLYPTDNSIVTLTAARGTMGYMAPELFYKNIGGVSYKADVYSFGMLLMEMA SRRKNMNEHEA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 89 | 89 | 7.3E-62 | – | |
| Gene3D | 1 | 91 | 91 | 2.7E-32 | – | |
| PANTHER | 1 | 89 | 89 | 7.3E-62 | – | |
| ProSiteProfiles | 1 | 91 | 91 | 22.959 | ||
| Pfam | 2 | 87 | 86 | 2.3E-21 | ||
| SUPERFAMILY | 2 | 85 | 84 | 1.35E-31 | ||
| ProSitePatterns | 3 | 15 | 13 | - | ||
| Coils | 77 | 91 | 15 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0172900.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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