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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0205900 |
| Transcript ID | LotjaGi1g1v0205900.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | High mobility group family; TAIR: AT1G76110.1 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain-containing protein; Swiss-Prot: sp|Q9SGS2|HMGB9_ARATH High mobility group B protein 9; TrEMBL-Plants: tr|I1JSY3|I1JSY3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0205900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:44745852..44755994) extracted from Lotus japonicus Gifu genome v1.2.
GTTGTGTCTGACTGTGATGTTGGAAGCGAGAGAAACACGGGGCGCTAATATTATTTGGCGGGTGGTGAATGATGCCATCA AAGGATAACATAAGCAAAGCATAAAGATTTCTTGTGTTAATCGACAAAACAATATATACATGTAGAATCTCGGACAAGAA CCGCTGACACAAGCAACAAAGCAATATCTCCTTGTATACATTCACTTTGTGTCCCGAATTTTCTTTCATGCAGAGTGCTT TTGATGGTTTAGTTGTTTATTCCACGTTGCTGTTGTATAGAACTTGAACCTCAGCTATGACTATGAGGGGTTTTGAATGA AGTCCCATATCGGTGGGTATCAGTGAGTCAGAATCTGTAGCGCACACACACACACACACACATATATATATATATATATA TGGGAGATACAAAGTCGAATGGATTGGCAGAAGGTTGAAGTGTACAGTGAGGTTCTTAGTCGACTCAGGGAATTGAACGT TCCAGAGGCTTTGGTTCCTGGTTTTGAGGATGAACTTTGGACGCATTTTCATCTACTTCCCACTAGGTACCCTGAAATTC ATGTTCCTGCTCTGTATCTTTTTGTTTCAAGTAAAATTGAGTTGAAAACAAATGAGGAAAATATCTTATTTTTTGTGATT AGATTGGGTACAAAGGTGTGTTTGTTACTTCAACTCCGTTTCGAAGAGCTTAGTTGAGTTTATCTTATAGCATAAGCGTT TATGCAAGTTGTTTTTTAGAGAACTTAAGTAAATAGTTTATGACCTAACCTAGAAACTGTTCAGATTAGCGTATCAATAA GAGCTTATACTTACATATAACTTATTTTCAGCAATCAAATTCTTCAATTAGCTTATGTGATAAACACTTATTGTCATATT TAACCACTTTTTATGATAGGTTTGCCTTGGATATGAATGTGGAGAGGGCTCAAGATGTTCTTATGCTTAAAAGTTTACTA CACATCGCACGAAACCCGACTACGACAACGGGACCTGCAGTTGAAGTCTGCCTTGTTCAGGTAGTTTAGTGCATGTTTGG AAATCTTAGCACACTTTGATTCTAAAGTCAAAATCAATTATGAGAAAAAGCTTGAAGTAGCATCTGAGTGTGTCATAATT GATTGTCGGGAAATGAAATCTGATTCTGATCCAAACAAGCTGCGTGAAGTAGATAAAGTTTTCACCTCTAAATGCTTTCC TTTCTCCTTGGCTAGAAAGTAGATGGTTATTGTTAGTTAGAGATTTCATGCTTCCTTCTAGGGAACTTATTTGCAGCGCC ATTGTTTGTTGATAGCTCTCTTTGCCTTAAAAATAAACGCAGTTGACTAGCTTACTGTCTGAGACTGGGCTTGACATTCA AGAAACACATGCTTTTTTCACATTGGATGGCTATTCATTGGATGTCTTTGCTGTTAGTGGTTGGCCAGTTGAGGTATTTT CCCCATATTTTCTTTACCATAGTACAGTAGTTCAATGAATTGAGATTGGTAAGGAAGGATGTTAGCTTCTCTCATGGCAC TCAAATGAAAAATGTCTGAATCAAATTGCATACCCTTCTAATTTTGACAACTTGATAACTTTTACTTACTTAAACAGGAT GCCATTGATACTTTTCAAAGAAGAATGGAGAATATACAATTGAACTCTATTATTGTCTATCACTTCTTGGTGACAAGTTT ACTTGACAAATGTCTATGGTTGAAATTTGCAGGAGACAGAGAAATTAAAACATGTACTAGCAAAGAAAATTCAGAAACTC GAGGTAGGCCCTCCCTATGCTACTTGTATTTCATGTTTACTTTAATGGATGCGTTTTAAGATCTTGCTTTTCCTGCAAGA ATGTTATTTACTCATCTCTTTTAAATAACAAAATAAACAGTCGTATCATGCTTCTACTTTACCTCATTCTTTTCAAAAAT GTAAAAATGATGTGCAAATATAAACATTGATTTACTTATAATGAAAAAGATCAGTGTTGCCCCTTGCATTCATCTCTTGA TTTACCCCTAAATTCCATATGTTGTTTATGGTAGTAGTTGCTTGGGCCCGATTGATTATAATTGTCCAGTTTCCCTTGTT AATGACAATTGCTGATCACTGTAAACATGTTCACAAATTTCACATATTAAAAGTGTAACTGCTTTCCCTGTAGTTTCGAT TAACAAGTGTTGAGAGATACAGATACTAGAACTAGAAGTTTTAAATTCTCTGGATTAATGTTTGCTTCATGCAATAATTT AAGTAAGTGAATTAAGCGTTGCTTGCATCTTCTCTCTTCCACTTTTAATAGGGGACTTTATAAATGATATTTTTGGTGGA AATCCAGAAGCAACCACAGTTGAAAGAAAATGGCAGTCTCCCTCTTGCAGAGCAAGGGAAAACTGAGATGGACTTTAGCT CTAGACATGCAAATTTTCCTGATTGTGAAAATGACATCTCAAAAATTGATCCTAGGTGCTTGAGACATGAAAAGAAAATT GCATCAGGACCTTTCAGTGACTTGTGAGTATTATCATTTTATTTCCTTGATATGTTTGAGTCAGTAATTATTGAGTTAGT GATAAGTTGAGGCAGGTATAAAGGCACGTTTGCTAATCAAGATGTAGCTATCAAGGTCCTTAAGGATGAGAATTTGAACG ATAGTATACATAGGGAGTTTGCTCAGGAAGTCTACATCCTAAGGTTTTTTTCTATCAAAACTTCCATTGTAATAATATTT ATAAAATTTTAATTTATAATCTATGTCCGACTCATGGTCTTTTCACATTTTACATTTGCAGTAAAGTTCAGCATGAGAAT GTTGCAAATTTGTTGGTGCTTGTACAAAGCCTCGAAACCTTTACCTTATCACAGGTAAGATTTGTCTTTCCTAGTTTCAT TTTGCTTATTGACTGCGATATCAATCTATTGAGAGAAATTTTGTTAATCACAATGCATCTTTTTTTTTTCCTCAGAATAT TTGTCAGGTGGAAGTATATGTATGACTTTCTGCATTTACATAAGACTGTCCTTGCTCTTCCATCTTTGCTGAAAGTAGCA ATTGATATTTCCAAAGGAATGGAGTATTTGCATCAGTGTGGTATCATACATCGGGACCTCAAAACGGCTAATCTTTTGAT AGATGAGAATGGGGTAAGTATACATTGTACATACAAGTTGAAAACATAGTAAAAGTCTATACCTAGATGCTATAAGATTT CATGTAATTGATGATCTACAGTGAACTTTCAAATTCTTAAGGCAAATCTTTGAAAATTTCACATGCTTTATGTTTTTTAT AGTTCTGTTCACATTTTTTGTCTGCTACATGTATTTTCATCTAGCACTTTACAAAGCATAAATTAGCATTTCATCTACCA TTTTGGTTGCTGAAAAACTTATCCTTCAGGTAGTTAAGGTTGCTGATTTTGGTGTAGCCAAAGTGTAAAAACAATCTGGT ATTATGACAGCAGAAACTGGTACTTATCGGTGGATGGCTCCAGAGGTCGGTGTATATTTATAAGTATTGCAATGCTGTTG ATTACTCCTTAAATTTTTTGAATTTTATAACTTACAGGCATGGATGAATGAGGGCAGTTTAAGGAAGGCTTCCTTGGAAT GAGAATGAAGGCTTTGTATGATGAACAGTAAATAGCTGAAACTTGAACAACTGTTAAAGCTAACTTGATTTTCTTGATTG CTTATGTGCTTTGCAGATGAATAATAACAATTTCTTTTATCCCCCATTTTGTAAATCCCCCCTCCACCCACTTTAAAAAA TGAAAGAAATGTGATAATCTTTCAGTAAAAGATAAAGGTAGGCTATTGCTCTTCGATTTTTTTCTCGGGTCGGTTGAACC TAAAAATGTCGTTATCATTGTTATAAAAACTGGGTCGATCATTGAATTAGTAAAGTTATTGATTCACGTATCAATGGTTC AACTGTAAAATTATCATATCATATATGTAATTATTACTTGTCATCAGCCTTTTATTTGCTTTAAAACTCTATTTTTAAAA TTAAAATATTTCAATAAACTAAAAAAATAGAAAATTTAAGATTGACCGGTTAAAGTTAGTTCTTCACAACAATTTTTTGA GCAACTTTACCGGTTTTGAAACAAGCTAATTTTGGAGTCAAATAGACCAATGCACCTGACTGATTTTCAGTTCAACTGGT TGTTTCTGTTTGATCTTTAAAACAATGATTTTTACTTATGGTTGCTTTAATTGGTCAAGTAAGTCATCTTGTAGAATTGC ATCCCTTGTTTTCCCTTCTACTTCTCATTGAATTGATTATAATTAACCTGGGATTTCCTTGACATATGGAAGGTTATTGG ACATAAACCATATGATCACAGAGCCAATGTCTTCTTCAGCTTTGCCATTGTTCTTTGGGAGTTGCTAACAGGAAAGGTAA CGCTTTCTGTGCTTTTCACTCTAAGCCTAGAGTTAAACTCTAGTCATTCCATGTCCAACTGAAAATGTACCCTCTCTACT TTGTAAAATTATATTATCCTTTCAATTTTCAATTAGGATTGTGCTAATAGAGCTTAGAATTTGATTGATATGCAAGACTT CTGTGCCTTTCAATTGAAGACTCTCCTTGACACATAGTACTGCAATATATCCTTCAATGCAACTAGCTAGATTATGTACT GAGACTGAATTCTGTGCAATTCAAAAGTTAATTTCCAGCCATAGGACTAACGGGTAAAATACAAATTTCGCATAGAAAAG AGTAAGGAATGATAGTGTCAATGGTTTAAATTGAGCAACAATGTATTTAACAGAAACAGAGGATAAAAAGAGGGATGAGG AATGTTTTGGAACTTTTTTTATTTTGTTTTTTGTTTTGTCCTCATTGCAAGCAGCAGTTGGAATGGTCCAGAAGGTATTT CTTATTGGTTCATATACACACATGTACTTTAATGTCAATCTCACATTAAATATGGGTCCATTTAATTTTCTTTCCAAACA CACATTTTTTTTCTAAAAAAATCCAATAGTAACCATTGGATACATTAATGTACATGAATGTATATGAACCAATTGATGCT TATCCAAAAAAAATATATATGAACCAATTGATTCTTTGGTGCAGTGCAGATACGTTTCAGGTTGAGCATTAAAGAGCAGA GCAGTCAGAAAGCACAAGTGCATGTCAACGCATGGTACTCGGAAGCTTGGCACAGACAGACAAGTTAGCATCATCAGAAC TGGCAATAACACCAGAATGGAAATTGCAGCAGCAAAAAGAAGCCAAAGAAGAAAGAGATAGAGATAATAATAATAATTAA TAATATACTTTAGTATAGTAATAAATATATTAAATATTAAATATTAAATATTAAATACAAGTCCTTAACTTAGGACTTTG AACCAAGCTTAATGGCAGAAATAAAGAGCCAACTCTGCTTCATCTGCAGAGTAACCGTTCCCCAACACGCGGCAAACCAT CTTCTTTAATTCATTTATTGCTTTGAGTATATCAAAATTCTCATTCCTTTTTCTTTTTCTTCTTCCTCACATCAAACACA CACTCCCTAGTCCCTCCCTTTCATTTCTCAACTCTGTTTCAGTTCTTCCCCTTTTTTTGTTCTCTGCTAAGAATGTCAGC CACCGGCAGCGGCGGTGACGACGGCATGTTCTACCCTCCTCCACTTGCCTATCATGAGGACATCGTCAATGATGCTAGCC TCTTCTGGAACACTCTCAAGCGCTTTCACTATGATATGGGTTCCAAGTTCATGTAAGCTTCAATAATTCCTTCATTTCTT AGATTATAGGAATTTTTCTTCTACCAGAGTACTGGATAATGGATATGTGATTTTTATTTTATTGAGTTTAAATTTTTCCA CTTTCTTCAGAATTTAGTTTTTTTTTTAATTATATTATGTGATGATTATACTTGGACCATTTTGCCCTCATCATCTTGTC AAGGATTCCTGTGATTGGAGGGAAGGATCTGGATTTGCACACCCTTTACGTGGAGGTTACTAGGAGAAGTGGTTATGAGA AGGTGGGCTCCATTATCCAATCAGTTTTCATGTTTTTATTTTATTTTAATTTTTTTATTAAATAAACAATTTGTGGTTTG TGGATGATGCATGTTTTCATGTGCAGGTGGTTGCTGAGAAGAAATGGAGGGAGGTGGGCAGTGTGTTCAATTTCTCCGCT ACCACCACAAGTGCTTCTTATGTGCTCAGGAAACACTATCTGAATCTCCTCTACAATTATGAACAAGTTCACTTCTTTAA GGTTCAGGGTCCTATGCATTCTTCTCCTGCAGGTACAGTACTGAATTCATTCACTCTTTGTTTTATGGAAATGGATTCTC TGCAGGGAATGTATCCCAACATTCACAAAGTCACCGAATTTGAGTCACTCTGTGTTGATCAAATTGGACGACTTAAATTT TAAGACATGTCGACCTATCTAAATCACAGGGTGCGTGTATTGTGAATGCATGATATCTCGAGATTTGGATTTCCCACCCC AAAGATTAGATTTGCCACCCAGCATTTTAAAAAAAATGCCAGGAGTACCCTTCGGAACATAAACTTCCGAAATATGTTAT GTTCAAAAGATAAAGTTCCGAAACCTACAATATTTCAGAAGATTAACTCCCGAAACTATTATTCACAGCAAACGTTGGTT TTTTAAGATTCGGATCATTAAGCTTGAATGGCACAATGGAACAATGGTGAAATGGTGGTGGTGGTGTCTTGTGGTGGTGG TGGTGGAGATCTCGTGGTGGTGGTGCAATGATGGTGGTTGGGAAGAAGGCAGGAAGAATAAAGAGAGAAGTGGAGAGGGT TGGTGGTGGAGGAGGGTAGTAATAAATCAGTAGAGTAGTAGGATAGGTGGAGGAGTGTGGGAGAAGTCATGGTGGCAGGG TGGCAGACTTGTGCACCTTTAATTTCGGAACTTTATGTTCTAAATGATTCCGGTGATTTATATTCCGAAACAGTAAAAAT TAGATTTGCCACCCCTTATTTGTAAGGTTTTGGAACTTTAAGTCCCGAAAGGTTTTGGAACTTTATGTTCCGAAAGGTTT TGGAACTTTATATTCCGAAACCTTTCGGAAAGTGAAACTATAATGTCTAAAGACTGGTGTTGTTCCAGAATATCACCTGG TACAATTTCTTAAAGGGAGAGGATGTCGAAGAGGGAGACGATGTCGAAGAGGGAGACGATGGGGGGAACTGGTTTGGAAT TGAAATGAAATTGAATGGTTTGGAACTGGGAATTATAAAATCGATTAGTTTCGGAACTTAAACTACCGAAACCTTTCAAA TCTTTATCTCCCATAAAATAACACGGAGGGATATTTTAGTAATTCCCCACGTTAAGTGGGGTGGCAAATCTAAATATAGG AGTGGGAAATCCAGTTCTCTGATATCTCTCACTCCATTTTGGTTTTTCTTTTTTCTTATGGTGTAACAGTTTATTTTTTT GTTGTTTTATTCATTGGCATATGAAACTACTTAAATGTAAAAGAATTACCCAATTTTATTGCATGGCAATTTGCAGGTGC ATTTTCTGGTGGCAGCTCCTCGTCGAAACCTGATTTTAATCTTGTGGAGTATTCACCTAAGCCTGCAAACAATAGCCCTG AATCCATTGTTGAAGGTACCTAATTGAAAAATCTCAACTTATATAAGAAATGACTGAATACTCAATTTCGACCGTGAAAG TGAAAGTGTCCTGTCAACTTAGTCTCTAGAAAGGGGGATACCTCTGGCCGTCACGGATTGTGTTAAAATCAGTGTAACTG ACCGATCCAATATTTGACACAATCAGAACTGCAAGAGTATTTTGTTCCTATAGGACTAATTGTCAAGATGCTTACAGTTT CACATTCAAAATTGAGCAATCAATTGGAATTGTTATTAGTAACATGAAGTGTAAGTTGGAACTGCTTTTGATGCTGAATT GCAGCTAAGGGAGGCCTCTATGGAGAGGGAACAATTGAAGGAAAATTTGATTGTGGCTATTTAGTGTCTGTGAAGCTGGG CTCAGAGGTTCTCAGAGGGGTGCTTTTCCATCCAGAGGAATCGGTTCCTCCTCCATCATCGGTTCCGCAGGATGTCGGAG CCATTGTACCATTCAATCCCAAAGCTCGCCGTTCTGTCCGGAAGAGGAGGAACAGGAGAAGGTGGGACCCTAATTACCCC AAGCCTAATAGGAGTGGCTACAACTTCTTCTTTGCTGCAAAGCATACCAAACTGAAAGAACTCTACCCAAATAGAGAAAG GGAGTTTACCAAAATGATTGGCCAGTCCTGGAACAGTCTTAGCCCTGATGAAAAAATGGTAATTAAATTGTCATTTTGTT ATGTTCATTGTTTTGATTAGAGTAAGGTAAAATGTAGAGGGAATTGTAAAATTGTTCGCAGAAAATGTTGGGCGCTGGTA ATACTAAGCAATAGTTACAATAAGAAGGAAATGCTCTCATAATCTCTTAATTGTGTAAAATGTCAGTCACGTTTTATCTC ATTAATTTGACGACATTTTACACAATTAAGGACTGCACGAGTATTTCTTAAGCCCAAATGAATTTACCTGCGTCTAACAC TTCCGGGACCAATTTGAGCATTCACTCATAAAATGTATAATACTTATGAGTTGTGAATGATGCAGGTTTACCAGAACATT GGGTTGATGGACAAGGAAAGGTACAAGAGAGAGTTGACGGAGTACAACGAGAGAATGAAGCTTCGGCAGCCAGAAGAGGT TGAACGTCGTCAATAACTTTATGGCAGAGGAAAGATAGAGTGGCTGGGATTGGAGTTCTATTATAACCTGATGGCTTTTT TAAGTTCATATATTGTTATTGTGGATAATGATCCACTGGACTAAACTATGTAGAACTATTTTTCTTTTTTCTTTTTTTTT TTGAAAACTTTTGTCGTTTCTTAGGTGATATTCACTATGCTGTGTTTTCCTGGGAGGATTTGCTGTTGGTCAGTAGGGAA CTGAACCAGGAGCTTCCTGGCGCGGCAGATGAATCGAACCTGGTTTACAGGACGGTTCGGTTTGAGGTTTTGAAGATGGA TTGGAAGGGGTTGAAATGGGACAAGATTGAAACATTGGGTGACAAGGTGTTGTTTGTTGGGGGGTATTCTTCGCTTTCGT TTTCTACTTCTGATTTTGGGGGATGTTGTGAAGCTGATTGCATCTATTTCACTGATGATTATTCTGAGTCTAATCACGAC GAAGCGTGTGGGAAACATGATTTGGGCATATTTAGATTACAGGATCAGAGCATTGAGCCTTTGGCCTGTTATTCCAGAAA TTCATATTCTGGGTTGGGTTGGCCACTTCCAATTTGGCTGACACCAAATCCATGTTAATCTAAGAATCTCATCATGTAAG TTTAGTTGCTTCTCTTACTCTCTTGTTTAAGTCAAATGAATTATTTTGCAGCTTGCTCTATTGTATCTTCATCTATTATA CTGCATTACTGATCCTGACATTGCAAACTTGATAATGTAACTGTGTGAAAGTGGCTAATGGTCTAGTTGATGCATGTCTA TTTGGTTGAAGCTATGGTTTAGACTCTATAGCTGAACTTGATTTTCTTTTGGAAGAAAAAAGAACAAGAGATATGAGAGA CTTGAATCACATCCTGCACTGAATGCTCATAGATATCATTTCATTCGTTCATATTCCTTCTGCAGGATGCCTTGGCTGGA TCTAGATTGCAAGGCTAGATCAATGTATTAATGCTGGATTGGATTGAGAGAGAGAGAGAGAGAGAGAGACATTGTTTTAT GGTTGATGAAGAAGGGACTCTGATGTATAAATGCTGGAAATTTTTAAATGATTAAGTGAATGTTTATACATGTTGAACAG CCAGTGTTTTAGACTTATAAGTGGTTGACAGAATGCTTTAGTTTGGTGAACATACATTATAGTATTTTAGACTTTTAAGG GTGTGTCTGTTTGGTGATCTCTAAAACTATTCCCGGGAAAGTTCGCATGGGAATGTTGTTTGTCTCGCAATTTGTACAAG TTATGTAAAAATATACCCAAACAACTTATTCTCCGGAAAGTTGATTACACACATTTTATCCAATTTTGATTCTCATGTTA AAGGTTGGGAATCTTATATTCCCATGAGAGTGGAAATTATTTTTTAAGATAACTACCCACTTC
CDS sequence (LotjaGi1g1v0205900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCAGCCACCGGCAGCGGCGGTGACGACGGCATGTTCTACCCTCCTCCACTTGCCTATCATGAGGACATCGTCAATGA TGCTAGCCTCTTCTGGAACACTCTCAAGCGCTTTCACTATGATATGGGTTCCAAGTTCATGATTCCTGTGATTGGAGGGA AGGATCTGGATTTGCACACCCTTTACGTGGAGGTTACTAGGAGAAGTGGTTATGAGAAGGTGGTTGCTGAGAAGAAATGG AGGGAGGTGGGCAGTGTGTTCAATTTCTCCGCTACCACCACAAGTGCTTCTTATGTGCTCAGGAAACACTATCTGAATCT CCTCTACAATTATGAACAAGTTCACTTCTTTAAGGTTCAGGGTCCTATGCATTCTTCTCCTGCAGGTGCATTTTCTGGTG GCAGCTCCTCGTCGAAACCTGATTTTAATCTTGTGGAGTATTCACCTAAGCCTGCAAACAATAGCCCTGAATCCATTGTT GAAGCTAAGGGAGGCCTCTATGGAGAGGGAACAATTGAAGGAAAATTTGATTGTGGCTATTTAGTGTCTGTGAAGCTGGG CTCAGAGGTTCTCAGAGGGGTGCTTTTCCATCCAGAGGAATCGGTTCCTCCTCCATCATCGGTTCCGCAGGATGTCGGAG CCATTGTACCATTCAATCCCAAAGCTCGCCGTTCTGTCCGGAAGAGGAGGAACAGGAGAAGGTGGGACCCTAATTACCCC AAGCCTAATAGGAGTGGCTACAACTTCTTCTTTGCTGCAAAGCATACCAAACTGAAAGAACTCTACCCAAATAGAGAAAG GGAGTTTACCAAAATGATTGGCCAGTCCTGGAACAGTCTTAGCCCTGATGAAAAAATGGTTTACCAGAACATTGGGTTGA TGGACAAGGAAAGGTACAAGAGAGAGTTGACGGAGTACAACGAGAGAATGAAGCTTCGGCAGCCAGAAGAGGTTGAACGT CGTCAATAA
Protein sequence (LotjaGi1g1v0205900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSATGSGGDDGMFYPPPLAYHEDIVNDASLFWNTLKRFHYDMGSKFMIPVIGGKDLDLHTLYVEVTRRSGYEKVVAEKKW REVGSVFNFSATTTSASYVLRKHYLNLLYNYEQVHFFKVQGPMHSSPAGAFSGGSSSSKPDFNLVEYSPKPANNSPESIV EAKGGLYGEGTIEGKFDCGYLVSVKLGSEVLRGVLFHPEESVPPPSSVPQDVGAIVPFNPKARRSVRKRRNRRRWDPNYP KPNRSGYNFFFAAKHTKLKELYPNREREFTKMIGQSWNSLSPDEKMVYQNIGLMDKERYKRELTEYNERMKLRQPEEVER RQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 10 | 318 | 309 | 2.2E-138 | – | |
| PANTHER | 10 | 318 | 309 | 2.2E-138 | – | |
| Gene3D | 19 | 126 | 108 | 2.3E-26 | ||
| SUPERFAMILY | 20 | 124 | 105 | 1.44E-31 | ||
| SMART | 22 | 112 | 91 | 1.1E-29 | – | |
| ProSiteProfiles | 25 | 116 | 92 | 26.197 | ||
| SMART | 26 | 117 | 92 | 1.0E-34 | ||
| CDD | 27 | 112 | 86 | 2.69491E-43 | – | |
| Pfam | 30 | 112 | 83 | 6.2E-19 | ||
| Gene3D | 224 | 322 | 99 | 1.6E-17 | ||
| SUPERFAMILY | 237 | 310 | 74 | 6.15E-19 | ||
| SMART | 239 | 308 | 70 | 7.9E-12 | ||
| Pfam | 240 | 307 | 68 | 1.4E-11 | ||
| ProSiteProfiles | 240 | 307 | 68 | 13.418 | ||
| CDD | 240 | 303 | 64 | 1.01588E-16 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
Expression pattern of LotjaGi1g1v0205900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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