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HMGB-UBF_HMG-box
Transcript | Name | Description | Predicted domains | Domain count |
---|---|---|---|---|
– | YABBY2-like transcription factor YAB2 [Morella rubra] gi|427199347|gb|AFY26892.1| | 9 | ||
– | PREDICTED: high mobility group B protein 9-like [Glycine max] gi|356508987|ref|XP_003523234.1| | 15 | ||
– | PREDICTED: FACT complex subunit SSRP1-like [Glycine max] gi|356496334|ref|XP_003517023.1| | 22 | ||
– | PREDICTED: high mobility group B protein 15-like [Glycine max] gi|356536532|ref|XP_003536791.1| | 11 | ||
– | PREDICTED: high mobility group B protein 15-like [Glycine max] gi|356536532|ref|XP_003536791.1| | 8 | ||
– | HMG1/2-like protein [Glycine max] gi|351725567|ref|NP_001236841.1| | 11 | ||
– | PREDICTED: FACT complex subunit SSRP1-like [Glycine max] gi|356496334|ref|XP_003517023.1| | 21 | ||
– | PREDICTED: FACT complex subunit SSRP1-like [Glycine max] gi|356496334|ref|XP_003517023.1| | 22 | ||
– | PREDICTED: HMG1/2-like protein-like [Cicer arietinum] gi|502161735|ref|XP_004512267.1| | 11 | ||
– | PREDICTED: high mobility group B protein 10-like isoform X1 [Cicer arietinum] gi|502127395|ref|XP_004499691.1| | 10 | ||
– | PREDICTED: high mobility group B protein 10-like isoform X1 [Cicer arietinum] gi|502127395|ref|XP_004499691.1| | 17 | ||
– | YABBY2-like transcription factor YAB2 [Morella rubra] gi|427199347|gb|AFY26892.1| | 9 | ||
– | PREDICTED: high mobility group B protein 14-like isoform X2 [Cicer arietinum] gi|502141898|ref|XP_004504692.1| | 11 | ||
– | PREDICTED: high mobility group B protein 6-like [Cicer arietinum] gi|502139083|ref|XP_004503638.1| | 11 | ||
– | PREDICTED: high mobility group B protein 13-like isoform 1 [Glycine max] gi|356523471|ref|XP_003530362.1| | 11 | ||
– | PREDICTED: high mobility group B protein 7-like isoform X1 [Cicer arietinum] gi|502121287|ref|XP_004497256.1| | 11 | ||
– | PREDICTED: high mobility group B protein 7-like isoform X2 [Cicer arietinum] gi|502121289|ref|XP_004497257.1| | 11 | ||
– | PREDICTED: high mobility group B protein 15-like isoform X1 [Cicer arietinum] gi|502121538|ref|XP_004497360.1| | 10 | ||
– | High mobility group family; TAIR: AT1G76110.1 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain-containing protein; Swiss-Prot: sp|Q9SGS2|HMGB9_ARATH High mobility group B protein 9; TrEMBL-Plants: tr|I1JSY3|I1JSY3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0205900 | 19 | ||
– | High mobility group family; TAIR: AT1G76110.1 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain-containing protein; Swiss-Prot: sp|Q9SGS2|HMGB9_ARATH High mobility group B protein 9; TrEMBL-Plants: tr|I1JSY3|I1JSY3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0205900 | 19 | ||
– | High mobility group family; TAIR: AT1G76110.1 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain-containing protein; Swiss-Prot: sp|Q9SGS2|HMGB9_ARATH High mobility group B protein 9; TrEMBL-Plants: tr|I1JSY3|I1JSY3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0205900 | 19 | ||
– | High mobility group B-like protein; TAIR: AT1G76110.1 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain-containing protein; Swiss-Prot: sp|Q9SGS2|HMGB9_ARATH High mobility group B protein 9; TrEMBL-Plants: tr|I1JSY3|I1JSY3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0240800 | 18 | ||
– | High mobility group protein; TAIR: AT3G51880.2 high mobility group B1; Swiss-Prot: sp|O49595|HMGB1_ARATH High mobility group B protein 1; TrEMBL-Plants: tr|I3T9K0|I3T9K0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0440200 | 12 | ||
– | High mobility group family protein; TAIR: AT1G04880.1 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain-containing protein; Swiss-Prot: sp|Q9MAT6|HMG15_ARATH High mobility group B protein 15; TrEMBL-Plants: tr|G7KWP7|G7KWP7_MEDTR High mobility group B-like protein; Found in the gene: LotjaGi1g1v0553900 | 21 | ||
– | High mobility group protein; TAIR: AT1G20693.2 high mobility group B2; Swiss-Prot: sp|P26585|HMGL_SOYBN HMG1/2-like protein; TrEMBL-Plants: tr|I3SJI3|I3SJI3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0566800 | 12 | ||
– | High mobility group; TAIR: AT3G28730.1 high mobility group; Swiss-Prot: sp|O04235|SSRP1_VICFA FACT complex subunit SSRP1; TrEMBL-Plants: tr|A0A1J7HI12|A0A1J7HI12_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0589200_LC | 15 | ||
– | FACT complex subunit SSRP1; TAIR: AT3G28730.1 high mobility group; Swiss-Prot: sp|O04235|SSRP1_VICFA FACT complex subunit SSRP1; TrEMBL-Plants: tr|I1J7R6|I1J7R6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0589200_LC | 22 | ||
– | FACT complex subunit SSRP1; TAIR: AT3G28730.1 high mobility group; Swiss-Prot: sp|O04235|SSRP1_VICFA FACT complex subunit SSRP1; TrEMBL-Plants: tr|I1J7R6|I1J7R6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0081600 | 28 | ||
– | High mobility group; TAIR: AT3G28730.1 high mobility group; Swiss-Prot: sp|O04235|SSRP1_VICFA FACT complex subunit SSRP1; TrEMBL-Plants: tr|A0A1J7HI12|A0A1J7HI12_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0081600 | 12 | ||
– | FACT complex subunit SSRP1; TAIR: AT3G28730.1 high mobility group; Swiss-Prot: sp|O04235|SSRP1_VICFA FACT complex subunit SSRP1; TrEMBL-Plants: tr|I1J7R6|I1J7R6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0256800 | 28 | ||
– | FACT complex subunit SSRP1; TAIR: AT3G28730.1 high mobility group; Swiss-Prot: sp|O04235|SSRP1_VICFA FACT complex subunit SSRP1; TrEMBL-Plants: tr|A0A0R0KM01|A0A0R0KM01_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0256800 | 31 | ||
– | FACT complex subunit SSRP1; TAIR: AT3G28730.1 high mobility group; Swiss-Prot: sp|O04235|SSRP1_VICFA FACT complex subunit SSRP1; TrEMBL-Plants: tr|I1J7R6|I1J7R6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0256800 | 31 | ||
– | YABBY transcription factor; TAIR: AT1G23420.2 Plant-specific transcription factor YABBY family protein; Swiss-Prot: sp|Q9LDT3|YAB4_ARATH Axial regulator YABBY 4; TrEMBL-Plants: tr|A0A0L9US49|A0A0L9US49_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0321600 | 9 | ||
– | High mobility group protein; TAIR: AT1G20693.2 high mobility group B2; Swiss-Prot: sp|O49596|HMGB2_ARATH High mobility group B protein 2; TrEMBL-Plants: tr|A0A1J7FXB8|A0A1J7FXB8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0355000 | 12 | ||
– | High mobility group family; TAIR: AT3G13350.1 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain-containing protein; Swiss-Prot: sp|Q9LTT3|HMG10_ARATH High mobility group B protein 10; TrEMBL-Plants: tr|A0A1J7IK62|A0A1J7IK62_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0331700 | 19 | ||
– | High mobility group family protein; TAIR: AT2G34450.1 HMG-box (high mobility group) DNA-binding family protein; Swiss-Prot: sp|O64702|HMG14_ARATH High mobility group B protein 14; TrEMBL-Plants: tr|I3S5Q5|I3S5Q5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0024600 | 12 | ||
– | High mobility group family protein; TAIR: AT4G11080.1 HMG (high mobility group) box protein; Swiss-Prot: sp|Q9T012|HMG13_ARATH High mobility group B protein 13; TrEMBL-Plants: tr|A0A0L9TH42|A0A0L9TH42_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0433300 | 13 | ||
– | High mobility group protein; TAIR: AT5G23420.1 high-mobility group box 6; Swiss-Prot: sp|Q8LDF9|HMGB7_ARATH High mobility group B protein 7; TrEMBL-Plants: tr|I3SCF2|I3SCF2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0354800 | 12 | ||
– | High mobility group family protein; TAIR: AT1G04880.1 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain-containing protein; Swiss-Prot: sp|Q9MAT6|HMG15_ARATH High mobility group B protein 15; TrEMBL-Plants: tr|K7LM49|K7LM49_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0361200 | 21 | ||
– | High mobility group family protein; TAIR: AT1G04880.1 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain-containing protein; Swiss-Prot: sp|Q9MAT6|HMG15_ARATH High mobility group B protein 15; TrEMBL-Plants: tr|K7LM49|K7LM49_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0361200 | 21 | ||
– | High mobility group family protein; TAIR: AT1G04880.1 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain-containing protein; Swiss-Prot: sp|Q9MAT6|HMG15_ARATH High mobility group B protein 15; TrEMBL-Plants: tr|K7LM49|K7LM49_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0361200 | 21 |
A list of co-occurring predicted domains within the L. japonicus gene space:
Predicted domain | Source | Observations | Saturation (%) |
---|---|---|---|
mobidb-lite | MobiDBLite | 1 | 2.44 |