Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0205900 |
| Transcript ID | LotjaGi1g1v0205900.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | High mobility group family; TAIR: AT1G76110.1 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain-containing protein; Swiss-Prot: sp|Q9SGS2|HMGB9_ARATH High mobility group B protein 9; TrEMBL-Plants: tr|I1JSY3|I1JSY3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0205900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:44745859..44755839) extracted from Lotus japonicus Gifu genome v1.2.
CTGACTGTGATGTTGGAAGCGAGAGAAACACGGGGCGCTAATATTATTTGGCGGGTGGTGAATGATGCCATCAAAGGATA ACATAAGCAAAGCATAAAGATTTCTTGTGTTAATCGACAAAACAATATATACATGTAGAATCTCGGACAAGAACCGCTGA CACAAGCAACAAAGCAATATCTCCTTGTATACATTCACTTTGTGTCCCGAATTTTCTTTCATGCAGAGTGCTTTTGATGG TTTAGTTGTTTATTCCACGTTGCTGTTGTATAGAACTTGAACCTCAGCTATGACTATGAGGGGTTTTGAATGAAGTCCCA TATCGGTGGGTATCAGTGAGTCAGAATCTGTAGCGCACACACACACACACACACATATATATATATATATATATGGGAGA TACAAAGTCGAATGGATTGGCAGAAGGTTGAAGTGTACAGTGAGGTTCTTAGTCGACTCAGGGAATTGAACGTTCCAGAG GCTTTGGTTCCTGGTTTTGAGGATGAACTTTGGACGCATTTTCATCTACTTCCCACTAGGTACCCTGAAATTCATGTTCC TGCTCTGTATCTTTTTGTTTCAAGTAAAATTGAGTTGAAAACAAATGAGGAAAATATCTTATTTTTTGTGATTAGATTGG GTACAAAGGTGTGTTTGTTACTTCAACTCCGTTTCGAAGAGCTTAGTTGAGTTTATCTTATAGCATAAGCGTTTATGCAA GTTGTTTTTTAGAGAACTTAAGTAAATAGTTTATGACCTAACCTAGAAACTGTTCAGATTAGCGTATCAATAAGAGCTTA TACTTACATATAACTTATTTTCAGCAATCAAATTCTTCAATTAGCTTATGTGATAAACACTTATTGTCATATTTAACCAC TTTTTATGATAGGTTTGCCTTGGATATGAATGTGGAGAGGGCTCAAGATGTTCTTATGCTTAAAAGTTTACTACACATCG CACGAAACCCGACTACGACAACGGGACCTGCAGTTGAAGTCTGCCTTGTTCAGGTAGTTTAGTGCATGTTTGGAAATCTT AGCACACTTTGATTCTAAAGTCAAAATCAATTATGAGAAAAAGCTTGAAGTAGCATCTGAGTGTGTCATAATTGATTGTC GGGAAATGAAATCTGATTCTGATCCAAACAAGCTGCGTGAAGTAGATAAAGTTTTCACCTCTAAATGCTTTCCTTTCTCC TTGGCTAGAAAGTAGATGGTTATTGTTAGTTAGAGATTTCATGCTTCCTTCTAGGGAACTTATTTGCAGCGCCATTGTTT GTTGATAGCTCTCTTTGCCTTAAAAATAAACGCAGTTGACTAGCTTACTGTCTGAGACTGGGCTTGACATTCAAGAAACA CATGCTTTTTTCACATTGGATGGCTATTCATTGGATGTCTTTGCTGTTAGTGGTTGGCCAGTTGAGGTATTTTCCCCATA TTTTCTTTACCATAGTACAGTAGTTCAATGAATTGAGATTGGTAAGGAAGGATGTTAGCTTCTCTCATGGCACTCAAATG AAAAATGTCTGAATCAAATTGCATACCCTTCTAATTTTGACAACTTGATAACTTTTACTTACTTAAACAGGATGCCATTG ATACTTTTCAAAGAAGAATGGAGAATATACAATTGAACTCTATTATTGTCTATCACTTCTTGGTGACAAGTTTACTTGAC AAATGTCTATGGTTGAAATTTGCAGGAGACAGAGAAATTAAAACATGTACTAGCAAAGAAAATTCAGAAACTCGAGGTAG GCCCTCCCTATGCTACTTGTATTTCATGTTTACTTTAATGGATGCGTTTTAAGATCTTGCTTTTCCTGCAAGAATGTTAT TTACTCATCTCTTTTAAATAACAAAATAAACAGTCGTATCATGCTTCTACTTTACCTCATTCTTTTCAAAAATGTAAAAA TGATGTGCAAATATAAACATTGATTTACTTATAATGAAAAAGATCAGTGTTGCCCCTTGCATTCATCTCTTGATTTACCC CTAAATTCCATATGTTGTTTATGGTAGTAGTTGCTTGGGCCCGATTGATTATAATTGTCCAGTTTCCCTTGTTAATGACA ATTGCTGATCACTGTAAACATGTTCACAAATTTCACATATTAAAAGTGTAACTGCTTTCCCTGTAGTTTCGATTAACAAG TGTTGAGAGATACAGATACTAGAACTAGAAGTTTTAAATTCTCTGGATTAATGTTTGCTTCATGCAATAATTTAAGTAAG TGAATTAAGCGTTGCTTGCATCTTCTCTCTTCCACTTTTAATAGGGGACTTTATAAATGATATTTTTGGTGGAAATCCAG AAGCAACCACAGTTGAAAGAAAATGGCAGTCTCCCTCTTGCAGAGCAAGGGAAAACTGAGATGGACTTTAGCTCTAGACA TGCAAATTTTCCTGATTGTGAAAATGACATCTCAAAAATTGATCCTAGGTGCTTGAGACATGAAAAGAAAATTGCATCAG GACCTTTCAGTGACTTGTGAGTATTATCATTTTATTTCCTTGATATGTTTGAGTCAGTAATTATTGAGTTAGTGATAAGT TGAGGCAGGTATAAAGGCACGTTTGCTAATCAAGATGTAGCTATCAAGGTCCTTAAGGATGAGAATTTGAACGATAGTAT ACATAGGGAGTTTGCTCAGGAAGTCTACATCCTAAGGTTTTTTTCTATCAAAACTTCCATTGTAATAATATTTATAAAAT TTTAATTTATAATCTATGTCCGACTCATGGTCTTTTCACATTTTACATTTGCAGTAAAGTTCAGCATGAGAATGTTGCAA ATTTGTTGGTGCTTGTACAAAGCCTCGAAACCTTTACCTTATCACAGGTAAGATTTGTCTTTCCTAGTTTCATTTTGCTT ATTGACTGCGATATCAATCTATTGAGAGAAATTTTGTTAATCACAATGCATCTTTTTTTTTTCCTCAGAATATTTGTCAG GTGGAAGTATATGTATGACTTTCTGCATTTACATAAGACTGTCCTTGCTCTTCCATCTTTGCTGAAAGTAGCAATTGATA TTTCCAAAGGAATGGAGTATTTGCATCAGTGTGGTATCATACATCGGGACCTCAAAACGGCTAATCTTTTGATAGATGAG AATGGGGTAAGTATACATTGTACATACAAGTTGAAAACATAGTAAAAGTCTATACCTAGATGCTATAAGATTTCATGTAA TTGATGATCTACAGTGAACTTTCAAATTCTTAAGGCAAATCTTTGAAAATTTCACATGCTTTATGTTTTTTATAGTTCTG TTCACATTTTTTGTCTGCTACATGTATTTTCATCTAGCACTTTACAAAGCATAAATTAGCATTTCATCTACCATTTTGGT TGCTGAAAAACTTATCCTTCAGGTAGTTAAGGTTGCTGATTTTGGTGTAGCCAAAGTGTAAAAACAATCTGGTATTATGA CAGCAGAAACTGGTACTTATCGGTGGATGGCTCCAGAGGTCGGTGTATATTTATAAGTATTGCAATGCTGTTGATTACTC CTTAAATTTTTTGAATTTTATAACTTACAGGCATGGATGAATGAGGGCAGTTTAAGGAAGGCTTCCTTGGAATGAGAATG AAGGCTTTGTATGATGAACAGTAAATAGCTGAAACTTGAACAACTGTTAAAGCTAACTTGATTTTCTTGATTGCTTATGT GCTTTGCAGATGAATAATAACAATTTCTTTTATCCCCCATTTTGTAAATCCCCCCTCCACCCACTTTAAAAAATGAAAGA AATGTGATAATCTTTCAGTAAAAGATAAAGGTAGGCTATTGCTCTTCGATTTTTTTCTCGGGTCGGTTGAACCTAAAAAT GTCGTTATCATTGTTATAAAAACTGGGTCGATCATTGAATTAGTAAAGTTATTGATTCACGTATCAATGGTTCAACTGTA AAATTATCATATCATATATGTAATTATTACTTGTCATCAGCCTTTTATTTGCTTTAAAACTCTATTTTTAAAATTAAAAT ATTTCAATAAACTAAAAAAATAGAAAATTTAAGATTGACCGGTTAAAGTTAGTTCTTCACAACAATTTTTTGAGCAACTT TACCGGTTTTGAAACAAGCTAATTTTGGAGTCAAATAGACCAATGCACCTGACTGATTTTCAGTTCAACTGGTTGTTTCT GTTTGATCTTTAAAACAATGATTTTTACTTATGGTTGCTTTAATTGGTCAAGTAAGTCATCTTGTAGAATTGCATCCCTT GTTTTCCCTTCTACTTCTCATTGAATTGATTATAATTAACCTGGGATTTCCTTGACATATGGAAGGTTATTGGACATAAA CCATATGATCACAGAGCCAATGTCTTCTTCAGCTTTGCCATTGTTCTTTGGGAGTTGCTAACAGGAAAGGTAACGCTTTC TGTGCTTTTCACTCTAAGCCTAGAGTTAAACTCTAGTCATTCCATGTCCAACTGAAAATGTACCCTCTCTACTTTGTAAA ATTATATTATCCTTTCAATTTTCAATTAGGATTGTGCTAATAGAGCTTAGAATTTGATTGATATGCAAGACTTCTGTGCC TTTCAATTGAAGACTCTCCTTGACACATAGTACTGCAATATATCCTTCAATGCAACTAGCTAGATTATGTACTGAGACTG AATTCTGTGCAATTCAAAAGTTAATTTCCAGCCATAGGACTAACGGGTAAAATACAAATTTCGCATAGAAAAGAGTAAGG AATGATAGTGTCAATGGTTTAAATTGAGCAACAATGTATTTAACAGAAACAGAGGATAAAAAGAGGGATGAGGAATGTTT TGGAACTTTTTTTATTTTGTTTTTTGTTTTGTCCTCATTGCAAGCAGCAGTTGGAATGGTCCAGAAGGTATTTCTTATTG GTTCATATACACACATGTACTTTAATGTCAATCTCACATTAAATATGGGTCCATTTAATTTTCTTTCCAAACACACATTT TTTTTCTAAAAAAATCCAATAGTAACCATTGGATACATTAATGTACATGAATGTATATGAACCAATTGATGCTTATCCAA AAAAAATATATATGAACCAATTGATTCTTTGGTGCAGTGCAGATACGTTTCAGGTTGAGCATTAAAGAGCAGAGCAGTCA GAAAGCACAAGTGCATGTCAACGCATGGTACTCGGAAGCTTGGCACAGACAGACAAGTTAGCATCATCAGAACTGGCAAT AACACCAGAATGGAAATTGCAGCAGCAAAAAGAAGCCAAAGAAGAAAGAGATAGAGATAATAATAATAATTAATAATATA CTTTAGTATAGTAATAAATATATTAAATATTAAATATTAAATATTAAATACAAGTCCTTAACTTAGGACTTTGAACCAAG CTTAATGGCAGAAATAAAGAGCCAACTCTGCTTCATCTGCAGAGTAACCGTTCCCCAACACGCGGCAAACCATCTTCTTT AATTCATTTATTGCTTTGAGTATATCAAAATTCTCATTCCTTTTTCTTTTTCTTCTTCCTCACATCAAACACACACTCCC TAGTCCCTCCCTTTCATTTCTCAACTCTGTTTCAGTTCTTCCCCTTTTTTTGTTCTCTGCTAAGAATGTCAGCCACCGGC AGCGGCGGTGACGACGGCATGTTCTACCCTCCTCCACTTGCCTATCATGAGGACATCGTCAATGATGCTAGCCTCTTCTG GAACACTCTCAAGCGCTTTCACTATGATATGGGTTCCAAGTTCATGTAAGCTTCAATAATTCCTTCATTTCTTAGATTAT AGGAATTTTTCTTCTACCAGAGTACTGGATAATGGATATGTGATTTTTATTTTATTGAGTTTAAATTTTTCCACTTTCTT CAGAATTTAGTTTTTTTTTTAATTATATTATGTGATGATTATACTTGGACCATTTTGCCCTCATCATCTTGTCAAGGATT CCTGTGATTGGAGGGAAGGATCTGGATTTGCACACCCTTTACGTGGAGGTTACTAGGAGAAGTGGTTATGAGAAGGTGGG CTCCATTATCCAATCAGTTTTCATGTTTTTATTTTATTTTAATTTTTTTATTAAATAAACAATTTGTGGTTTGTGGATGA TGCATGTTTTCATGTGCAGGTGGTTGCTGAGAAGAAATGGAGGGAGGTGGGCAGTGTGTTCAATTTCTCCGCTACCACCA CAAGTGCTTCTTATGTGCTCAGGAAACACTATCTGAATCTCCTCTACAATTATGAACAAGTTCACTTCTTTAAGGTTCAG GGTCCTATGCATTCTTCTCCTGCAGGTACAGTACTGAATTCATTCACTCTTTGTTTTATGGAAATGGATTCTCTGCAGGG AATGTATCCCAACATTCACAAAGTCACCGAATTTGAGTCACTCTGTGTTGATCAAATTGGACGACTTAAATTTTAAGACA TGTCGACCTATCTAAATCACAGGGTGCGTGTATTGTGAATGCATGATATCTCGAGATTTGGATTTCCCACCCCAAAGATT AGATTTGCCACCCAGCATTTTAAAAAAAATGCCAGGAGTACCCTTCGGAACATAAACTTCCGAAATATGTTATGTTCAAA AGATAAAGTTCCGAAACCTACAATATTTCAGAAGATTAACTCCCGAAACTATTATTCACAGCAAACGTTGGTTTTTTAAG ATTCGGATCATTAAGCTTGAATGGCACAATGGAACAATGGTGAAATGGTGGTGGTGGTGTCTTGTGGTGGTGGTGGTGGA GATCTCGTGGTGGTGGTGCAATGATGGTGGTTGGGAAGAAGGCAGGAAGAATAAAGAGAGAAGTGGAGAGGGTTGGTGGT GGAGGAGGGTAGTAATAAATCAGTAGAGTAGTAGGATAGGTGGAGGAGTGTGGGAGAAGTCATGGTGGCAGGGTGGCAGA CTTGTGCACCTTTAATTTCGGAACTTTATGTTCTAAATGATTCCGGTGATTTATATTCCGAAACAGTAAAAATTAGATTT GCCACCCCTTATTTGTAAGGTTTTGGAACTTTAAGTCCCGAAAGGTTTTGGAACTTTATGTTCCGAAAGGTTTTGGAACT TTATATTCCGAAACCTTTCGGAAAGTGAAACTATAATGTCTAAAGACTGGTGTTGTTCCAGAATATCACCTGGTACAATT TCTTAAAGGGAGAGGATGTCGAAGAGGGAGACGATGTCGAAGAGGGAGACGATGGGGGGAACTGGTTTGGAATTGAAATG AAATTGAATGGTTTGGAACTGGGAATTATAAAATCGATTAGTTTCGGAACTTAAACTACCGAAACCTTTCAAATCTTTAT CTCCCATAAAATAACACGGAGGGATATTTTAGTAATTCCCCACGTTAAGTGGGGTGGCAAATCTAAATATAGGAGTGGGA AATCCAGTTCTCTGATATCTCTCACTCCATTTTGGTTTTTCTTTTTTCTTATGGTGTAACAGTTTATTTTTTTGTTGTTT TATTCATTGGCATATGAAACTACTTAAATGTAAAAGAATTACCCAATTTTATTGCATGGCAATTTGCAGGTGCATTTTCT GGTGGCAGCTCCTCGTCGAAACCTGATTTTAATCTTGTGGAGTATTCACCTAAGCCTGCAAACAATAGCCCTGAATCCAT TGTTGAAGGTACCTAATTGAAAAATCTCAACTTATATAAGAAATGACTGAATACTCAATTTCGACCGTGAAAGTGAAAGT GTCCTGTCAACTTAGTCTCTAGAAAGGGGGATACCTCTGGCCGTCACGGATTGTGTTAAAATCAGTGTAACTGACCGATC CAATATTTGACACAATCAGAACTGCAAGAGTATTTTGTTCCTATAGGACTAATTGTCAAGATGCTTACAGTTTCACATTC AAAATTGAGCAATCAATTGGAATTGTTATTAGTAACATGAAGTGTAAGTTGGAACTGCTTTTGATGCTGAATTGCAGCTA AGGGAGGCCTCTATGGAGAGGGAACAATTGAAGGAAAATTTGATTGTGGCTATTTAGTGTCTGTGAAGCTGGGCTCAGAG GTTCTCAGAGGGGTGCTTTTCCATCCAGAGGAATCGGTTCCTCCTCCATCATCGGTTCCGCAGGATGTCGGAGCCATTGT ACCATTCAATCCCAAAGCTCGCCGTTCTGTCCGGAAGAGGAGGAACAGGAGAAGGTGGGACCCTAATTACCCCAAGCCTA ATAGGAGTGGCTACAACTTCTTCTTTGCTGCAAAGCATACCAAACTGAAAGAACTCTACCCAAATAGAGAAAGGGAGTTT ACCAAAATGATTGGCCAGTCCTGGAACAGTCTTAGCCCTGATGAAAAAATGGTAATTAAATTGTCATTTTGTTATGTTCA TTGTTTTGATTAGAGTAAGGTAAAATGTAGAGGGAATTGTAAAATTGTTCGCAGAAAATGTTGGGCGCTGGTAATACTAA GCAATAGTTACAATAAGAAGGAAATGCTCTCATAATCTCTTAATTGTGTAAAATGTCAGTCACGTTTTATCTCATTAATT TGACGACATTTTACACAATTAAGGACTGCACGAGTATTTCTTAAGCCCAAATGAATTTACCTGCGTCTAACACTTCCGGG ACCAATTTGAGCATTCACTCATAAAATGTATAATACTTATGAGTTGTGAATGATGCAGGTTTACCAGAACATTGGGTTGA TGGACAAGGAAAGGTACAAGAGAGAGTTGACGGAGTACAACGAGAGAATGAAGCTTCGGCAGCCAGAAGAGGTTGAACGT CGTCAATAACTTTATGGCAGAGGAAAGATAGAGTGGCTGGGATTGGAGTTCTATTATAACCTGATGGCTTTTTTAAGTTC ATATATTGTTATTGTGGATAATGATCCACTGGACTAAACTATGTAGAACTATTTTTCTTTTTTCTTTTTTTTTTTGAAAA CTTTTGTCGTTTCTTAGGTGATATTCACTATGCTGTGTTTTCCTGGGAGGATTTGCTGTTGGTCAGTAGGGAACTGAACC AGGAGCTTCCTGGCGCGGCAGATGAATCGAACCTGGTTTACAGGACGGTTCGGTTTGAGGTTTTGAAGATGGATTGGAAG GGGTTGAAATGGGACAAGATTGAAACATTGGGTGACAAGGTGTTGTTTGTTGGGGGGTATTCTTCGCTTTCGTTTTCTAC TTCTGATTTTGGGGGATGTTGTGAAGCTGATTGCATCTATTTCACTGATGATTATTCTGAGTCTAATCACGACGAAGCGT GTGGGAAACATGATTTGGGCATATTTAGATTACAGGATCAGAGCATTGAGCCTTTGGCCTGTTATTCCAGAAATTCATAT TCTGGGTTGGGTTGGCCACTTCCAATTTGGCTGACACCAAATCCATGTTAATCTAAGAATCTCATCATGTAAGTTTAGTT GCTTCTCTTACTCTCTTGTTTAAGTCAAATGAATTATTTTGCAGCTTGCTCTATTGTATCTTCATCTATTATACTGCATT ACTGATCCTGACATTGCAAACTTGATAATGTAACTGTGTGAAAGTGGCTAATGGTCTAGTTGATGCATGTCTATTTGGTT GAAGCTATGGTTTAGACTCTATAGCTGAACTTGATTTTCTTTTGGAAGAAAAAAGAACAAGAGATATGAGAGACTTGAAT CACATCCTGCACTGAATGCTCATAGATATCATTTCATTCGTTCATATTCCTTCTGCAGGATGCCTTGGCTGGATCTAGAT TGCAAGGCTAGATCAATGTATTAATGCTGGATTGGATTGAGAGAGAGAGAGAGAGAGAGAGACATTGTTTTATGGTTGAT GAAGAAGGGACTCTGATGTATAAATGCTGGAAATTTTTAAATGATTAAGTGAATGTTTATACATGTTGAACAGCCAGTGT TTTAGACTTATAAGTGGTTGACAGAATGCTTTAGTTTGGTGAACATACATTATAGTATTTTAGACTTTTAAGGGTGTGTC TGTTTGGTGATCTCTAAAACTATTCCCGGGAAAGTTCGCATGGGAATGTTGTTTGTCTCGC
CDS sequence (LotjaGi1g1v0205900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCAGCCACCGGCAGCGGCGGTGACGACGGCATGTTCTACCCTCCTCCACTTGCCTATCATGAGGACATCGTCAATGA TGCTAGCCTCTTCTGGAACACTCTCAAGCGCTTTCACTATGATATGGGTTCCAAGTTCATGATTCCTGTGATTGGAGGGA AGGATCTGGATTTGCACACCCTTTACGTGGAGGTTACTAGGAGAAGTGGTTATGAGAAGGTGGTTGCTGAGAAGAAATGG AGGGAGGTGGGCAGTGTGTTCAATTTCTCCGCTACCACCACAAGTGCTTCTTATGTGCTCAGGAAACACTATCTGAATCT CCTCTACAATTATGAACAAGTTCACTTCTTTAAGGTTCAGGGTCCTATGCATTCTTCTCCTGCAGGTGCATTTTCTGGTG GCAGCTCCTCGTCGAAACCTGATTTTAATCTTGTGGAGTATTCACCTAAGCCTGCAAACAATAGCCCTGAATCCATTGTT GAAGCTAAGGGAGGCCTCTATGGAGAGGGAACAATTGAAGGAAAATTTGATTGTGGCTATTTAGTGTCTGTGAAGCTGGG CTCAGAGGTTCTCAGAGGGGTGCTTTTCCATCCAGAGGAATCGGTTCCTCCTCCATCATCGGTTCCGCAGGATGTCGGAG CCATTGTACCATTCAATCCCAAAGCTCGCCGTTCTGTCCGGAAGAGGAGGAACAGGAGAAGGTGGGACCCTAATTACCCC AAGCCTAATAGGAGTGGCTACAACTTCTTCTTTGCTGCAAAGCATACCAAACTGAAAGAACTCTACCCAAATAGAGAAAG GGAGTTTACCAAAATGATTGGCCAGTCCTGGAACAGTCTTAGCCCTGATGAAAAAATGGTTTACCAGAACATTGGGTTGA TGGACAAGGAAAGGTACAAGAGAGAGTTGACGGAGTACAACGAGAGAATGAAGCTTCGGCAGCCAGAAGAGGTTGAACGT CGTCAATAA
Protein sequence (LotjaGi1g1v0205900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSATGSGGDDGMFYPPPLAYHEDIVNDASLFWNTLKRFHYDMGSKFMIPVIGGKDLDLHTLYVEVTRRSGYEKVVAEKKW REVGSVFNFSATTTSASYVLRKHYLNLLYNYEQVHFFKVQGPMHSSPAGAFSGGSSSSKPDFNLVEYSPKPANNSPESIV EAKGGLYGEGTIEGKFDCGYLVSVKLGSEVLRGVLFHPEESVPPPSSVPQDVGAIVPFNPKARRSVRKRRNRRRWDPNYP KPNRSGYNFFFAAKHTKLKELYPNREREFTKMIGQSWNSLSPDEKMVYQNIGLMDKERYKRELTEYNERMKLRQPEEVER RQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 10 | 318 | 309 | 2.2E-138 | – | |
| PANTHER | 10 | 318 | 309 | 2.2E-138 | – | |
| Gene3D | 19 | 126 | 108 | 2.3E-26 | ||
| SUPERFAMILY | 20 | 124 | 105 | 1.44E-31 | ||
| SMART | 22 | 112 | 91 | 1.1E-29 | – | |
| ProSiteProfiles | 25 | 116 | 92 | 26.197 | ||
| SMART | 26 | 117 | 92 | 1.0E-34 | ||
| CDD | 27 | 112 | 86 | 2.69491E-43 | – | |
| Pfam | 30 | 112 | 83 | 6.2E-19 | ||
| Gene3D | 224 | 322 | 99 | 1.6E-17 | ||
| SUPERFAMILY | 237 | 310 | 74 | 6.15E-19 | ||
| SMART | 239 | 308 | 70 | 7.9E-12 | ||
| Pfam | 240 | 307 | 68 | 1.4E-11 | ||
| ProSiteProfiles | 240 | 307 | 68 | 13.418 | ||
| CDD | 240 | 303 | 64 | 1.01588E-16 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
Expression pattern of LotjaGi1g1v0205900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…