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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0214200 |
| Transcript ID | LotjaGi1g1v0214200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chaperone protein dnaJ, putative; TAIR: AT3G47940.1 DNAJ heat shock family protein; Swiss-Prot: sp|Q80Y75|DJB13_MOUSE DnaJ homolog subfamily B member 13; TrEMBL-Plants: tr|V7CHS3|V7CHS3_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0214200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:47228024..47232131) extracted from Lotus japonicus Gifu genome v1.2.
ACCAAAAGTAAAAAAGGAAAAAATCAATTACCCGAAAAAACTAGTAACGTAAATTAAAAAAGGAAAAAATGAATTACCCG AAAAAACAGAAACTAAACGGGTAAGTCATAAAGACAAATGGACCCACCGGCATATGGTTATATATAAATATATCCAACAC CTCCTCCTCCAATCTTCACTGAGCCACCAACTGTAACCGTGCCGGAACTTCAGAGAGAGAGAGAGAGAGAGAGAGAAATG GGCATGGATTACTACAACGTGTTGAAGGTGCATCGAAACGCGAGCGATGAGGATTTGAAGAAAGCGTACAAGAGGCTCGC GATGAGTTGGCACCCTGACAAAAACCGTGACAAAAAAATCGAAGCCGAAAACAAGTTCAAGCTCATCTCTGAAGCTTACG ACATTCTCAGCGACCCGCAGAAGCGTCAGATCTACGATCTCTACGGCGAGGAGATTCTCAAGTCCGGTCAGTTTCCGCCG CCATCATCTGCTGCTTCATCCTCACGCGCCGCCGCGTACCGCAACCACCACTACCAGCAACAGCAACAGCAACAGCAACA GCAGCAACAGCGTCAGAACGCCACCTCGGGGTTCCGGTTCAACCCGCGCGATGCTGATGATATTTACGCTGAGTTCTTTG GGTCTGATGGCGCCGACGCTGGTGGCGGGCCGTCGCGGAGGGATAGTTTCTTTAGGACCTCGAATGGCGGTGCTGCGTTT GGCGGCGGACCGGCTAGGAAGGCGCCTGCTGTGGAGAACGCGCTGCCGTGTAGCTTGGAAGACCTTTGCAAAGGTGTCAT GAAGAAGATGAAGATTTCGAGGACTGTCTCTGATTCTTATGGGTAAAATTATCTAACCTTGCTAATGATTTGTGTTCTTG AAATTCTGTGTTTCTGTTAATTATTCATTCTGAGATTGTGGTTGATTCAATTTCAAACTAATTTTCATCCAAGATTGAAT GTTAAACCCTAAATTATAACCTGACCTACAAATGTAGTGCATTGGTTGAATTGCTGTGGTTCTTTAAGTGATTATATGTC GAAAAGATTGTTTTTTTATCAGTTTAAAGGTGTTATGGAGTATATATGAACTTATGAAGTAGATTGAACTGTGTTTGATG CCAAATTCTCCATCTACTCTGACAAATTCTATGTTAAAGCATTAACATCAACTGTACATTTTACTTGCAAATATCAAATT CTGTTTATGACATTGAAGTCTTGCCCTTCAATTGATATCATGGCGACTCCCCGTTTGACTTTGCTTGTTTAGTAATAGAC CTATATTACCCCTGATGGTTGATTGTTCTTGAAGTCTGTATCCTTGACTGGTTTGGTAATATGGCTTCATTGATTTTGTA ATTTTTTTTCTTTTGCTTCCTGAAAAACAATATTCACTTTCTGTTATCTCAGTGAGAGACAGGTAATGAGGGCCATGCAC ACTTCACATTTACTTGGGCTGAACCTAGTTAATGTATTAGTACTGCTAAAGTTGAGACTATCAGGACACGACCTCCTTGA CATTTGTGTAGTGTATGGATTGAGACAAATGAATCCTTGTTTTTACTTTCCCCACATCTTGATTTGAACTGATTGCTTTA GTGGTTTGTTTCTGATATAAATGAACTTTAGGCTTCCCCACATAAATTTCAAAAATAATCTCATCACCTTCCATTTTTTC AGAGACACAGCCCTAGATTTTGCGTATCTTTATGAAAGATAATTCATTCACACTTTACTGTGTGAATTCAAATACTGTAC TAATCTGGTCCAGTGATTTGAAGTTTATCTCAACACATAATTGAGTATGGCAAATTTAAAATTTACCATCCTGATTTTTG GTCTCTTCTGATACTTGGGAATCTTAACTGCCATTTTCCACTATCTTTTTGGAATTTATGCTGCATTTTGCTCTCTTCTG ATTCTTCTTGATGCTTGTATGGTTCTGTGTAGATTATTACTTCCATTTTGGAAGTGAAGTGATAATAGTTTATAGATTCA TTTCATTGAGTTTTCTTATATTCACCATTGAGAAATCATGCTGTTCTTATTGGGCGAGATAATCCAGATGACAGTTGTTT AAATTTATAGTAGAAAGCTCTCTAGTCTTCACTGTTAACATATCTGGCAGTTGCTTAACCACTTTAACAGTTACGCTGAC TAAGTATGAGTCTGATAACAGCCTACCTCTACTCAACTAATTACTCTAATATGTTAAATTTAAGTCTCCATCTTAATACT TGTTGTTCTCATCTTTTCTAGGATGACTTGAGATAATGTTTTGTGTTTATTAGCCATCATTGAGTTTAACGTGGTTTGCT TGACAGGGAAGGCTTTTGTCATTATAAGTCTTATAATTGCAAATTAAATCTATTTTGCTGTATATACACTGGATTATTGG GGATTGTGAGACTTTAAAGGAGGAAGCAAATAATCACAAATATATAGAAGCAGTGTATGGTTTACAATGGATGAACAATG ATTTTGATTGAAATATGTACAGAGAGTCAAGGTAATGGTGAGTCTTGGCCCAATGGTAAGGTTGCTGGCCTTGTAACCTG TTGGTCATGAGTTGCAGAACAGCCTTACTATCTGCTTTCCAGTGTAAGAAGAAACAGGGAAATAATTGACTTGTTATACT AACAACACGTTGTATAGACAATTGTGTTTATTTGCCTTTTTACATATTATTGACATGCTCACCTTTTTGGAAAAAGTTCT GCTGTGGTTCTTTTACATCTGAGAAATTGAAATTTATGTTTGTTTACAATGTTTGACATTTAAATTTTATTTCAGCAATT GCCGGAATGTGGAGGAGATCTTGACTATTGAGGTAAAACCTGGCTGGAAGAAAGGAACGAAGATTACCTTCCTGGAGAAG GGTAACCATGAGCCTGGTGTCATCCCTGCAGATCTAATTTTCGTGATAGATGAGAAACCACATGCTGTTTATAGAAGGGA GGGTAATGATCTGGTGATTAACCAGGAGATTACACTTCTTGAGGCCCTTACAGGTAAAACCTTGAATCTCACTACCTTGG ATGGAAGGAGTCTATCGATCCCATTGACAGATATTGTCAAACCTGGTGCTGATGTCGTTGTCCCTAATGAAGGGATGCCG ATATCAAAAGAGCCTGGGAAGAAAGGGAATTTAAAAATTAAGCTGGACATCAAGTATCCTTCAAGGCTTACTGCAGAGCA GAAATCTGATCTGAGGAGAGTTTTAGGTGGAATCTCATGAAAGTTTGAGTTTGGTTTTTGGTGTCACTGATGAATGCAGA TTGTAAATATAGGACAGGAATCTCTACTGGTAAATTTAAGTATTAAGAGTCTGATTGGTTTATCGTTAGAAAGTACGTAA ATGAAAAAATATCACATGTTGAGACATTTTCTGTTGAAGTGTCTCGAGATGTGTTACTTTTCCGTTTTCATACTTTCTAA CCGTAAACCAAGCCGACACTTAGGACTAGCATAACGTGGGCCCATACTTATTGCTTGCACTTTTTGCAGGGTAGGAGACA AAAGTGACTTTTTGGAAATGATTTTATTTTAAGCGTCAATCTTAGGTCAATTCTACTTTTTTTTTACAGCAAGGTCAATT CTACTTATTTTCCATTATTTTTGCGTCAGCTTATTTTGCTTTTGATTTAACTCGAATATTGCTCGAGTCTTGATAGAATC ACTATGAGTCGTTTATTCTATGAAAATGTATATACTGATTGATTAATTTATTTGTTGGAAGTTACTTTATTGATATGCTG TTCTTTTACGGTTTAAATTACGACATGGGATGCCTATGCCTGCCTTATATTACAGTCTCGTTTTTTCTGCTGTAAAACCA TGATTATAATGAGGCAAAATTTTCACTATCAATAAACTGTTGTGCATGTATTTAAAAATGTTATATATTTATCCCTCTAA AGTTTCAGTATACTACATAACTTTCATTGTGTAGTCACGACGTGTGTGTATTTTTTTTGGCTTCACCTGAAACACTTAGG GTCTGTTTGATTGCAGTTCTAGTTTTCAGTTTTTAAAACAGTTTTCAGAAATAATTCTTAAAAACAGTTTTCAGAAGAAG AAAACAGTTTGAATGACATGTTTTCAAA
CDS sequence (LotjaGi1g1v0214200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGCATGGATTACTACAACGTGTTGAAGGTGCATCGAAACGCGAGCGATGAGGATTTGAAGAAAGCGTACAAGAGGCT CGCGATGAGTTGGCACCCTGACAAAAACCGTGACAAAAAAATCGAAGCCGAAAACAAGTTCAAGCTCATCTCTGAAGCTT ACGACATTCTCAGCGACCCGCAGAAGCGTCAGATCTACGATCTCTACGGCGAGGAGATTCTCAAGTCCGGTCAGTTTCCG CCGCCATCATCTGCTGCTTCATCCTCACGCGCCGCCGCGTACCGCAACCACCACTACCAGCAACAGCAACAGCAACAGCA ACAGCAGCAACAGCGTCAGAACGCCACCTCGGGGTTCCGGTTCAACCCGCGCGATGCTGATGATATTTACGCTGAGTTCT TTGGGTCTGATGGCGCCGACGCTGGTGGCGGGCCGTCGCGGAGGGATAGTTTCTTTAGGACCTCGAATGGCGGTGCTGCG TTTGGCGGCGGACCGGCTAGGAAGGCGCCTGCTGTGGAGAACGCGCTGCCGTGTAGCTTGGAAGACCTTTGCAAAGGTGT CATGAAGAAGATGAAGATTTCGAGGACTGTCTCTGATTCTTATGGCAATTGCCGGAATGTGGAGGAGATCTTGACTATTG AGGTAAAACCTGGCTGGAAGAAAGGAACGAAGATTACCTTCCTGGAGAAGGGTAACCATGAGCCTGGTGTCATCCCTGCA GATCTAATTTTCGTGATAGATGAGAAACCACATGCTGTTTATAGAAGGGAGGGTAATGATCTGGTGATTAACCAGGAGAT TACACTTCTTGAGGCCCTTACAGGTAAAACCTTGAATCTCACTACCTTGGATGGAAGGAGTCTATCGATCCCATTGACAG ATATTGTCAAACCTGGTGCTGATGTCGTTGTCCCTAATGAAGGGATGCCGATATCAAAAGAGCCTGGGAAGAAAGGGAAT TTAAAAATTAAGCTGGACATCAAGTATCCTTCAAGGCTTACTGCAGAGCAGAAATCTGATCTGAGGAGAGTTTTAGGTGG AATCTCATGA
Protein sequence (LotjaGi1g1v0214200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGMDYYNVLKVHRNASDEDLKKAYKRLAMSWHPDKNRDKKIEAENKFKLISEAYDILSDPQKRQIYDLYGEEILKSGQFP PPSSAASSSRAAAYRNHHYQQQQQQQQQQQQRQNATSGFRFNPRDADDIYAEFFGSDGADAGGGPSRRDSFFRTSNGGAA FGGGPARKAPAVENALPCSLEDLCKGVMKKMKISRTVSDSYGNCRNVEEILTIEVKPGWKKGTKITFLEKGNHEPGVIPA DLIFVIDEKPHAVYRREGNDLVINQEITLLEALTGKTLNLTTLDGRSLSIPLTDIVKPGADVVVPNEGMPISKEPGKKGN LKIKLDIKYPSRLTAEQKSDLRRVLGGIS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 80 | 80 | 4.8E-29 | ||
| PANTHER | 1 | 93 | 93 | 9.5E-133 | – | |
| PANTHER | 1 | 93 | 93 | 9.5E-133 | – | |
| SUPERFAMILY | 3 | 82 | 80 | 8.64E-28 | ||
| SMART | 3 | 62 | 60 | 3.0E-27 | ||
| Pfam | 4 | 67 | 64 | 5.2E-26 | ||
| CDD | 4 | 59 | 56 | 3.41019E-22 | ||
| ProSiteProfiles | 4 | 70 | 67 | 22.822 | ||
| PRINTS | 6 | 24 | 19 | 5.6E-25 | ||
| PRINTS | 24 | 39 | 16 | 5.6E-25 | ||
| PRINTS | 42 | 62 | 21 | 5.6E-25 | ||
| ProSitePatterns | 47 | 66 | 20 | - | ||
| PRINTS | 62 | 81 | 20 | 5.6E-25 | ||
| MobiDBLite | 77 | 121 | 45 | - | – | |
| MobiDBLite | 80 | 120 | 41 | - | – | |
| PANTHER | 113 | 347 | 235 | 9.5E-133 | – | |
| PANTHER | 113 | 347 | 235 | 9.5E-133 | – | |
| MobiDBLite | 134 | 155 | 22 | - | – | |
| Gene3D | 169 | 250 | 82 | 8.5E-29 | – | |
| Pfam | 173 | 330 | 158 | 3.6E-40 | ||
| SUPERFAMILY | 174 | 251 | 78 | 2.62E-14 | ||
| CDD | 176 | 333 | 158 | 2.2299E-42 | – | |
| Gene3D | 251 | 331 | 81 | 1.5E-24 | – | |
| SUPERFAMILY | 254 | 339 | 86 | 1.83E-21 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Protein folding | The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure. | ||
| Molecular function | Unfolded protein binding | Interacting selectively and non-covalently with an unfolded protein. |
Expression pattern of LotjaGi1g1v0214200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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