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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0221800 |
| Transcript ID | LotjaGi1g1v0221800.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Disease resistance protein (TIR-NBS-LRR class); TAIR: AT1G72930.1 toll/interleukin-1 receptor-like protein; Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|G7K8F2|G7K8F2_MEDTR Disease resistance protein (TIR-NBS-LRR class); Found in the gene: LotjaGi1g1v0221800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:49260257..49266889) extracted from Lotus japonicus Gifu genome v1.2.
ATTTTTATTCCATCTCAACCCATTGCATTCCATCAATTCACAAGTTGGGATGGTGGTAATATGCAACTTGCAAGTGTAGA TTGCAGTATCTGACTTATCTTCAATTTGCGTTTGGGACGGAGTTACTAGTGGCTGCTTAACCTCATCTTCTGCCATCTAC TTGGTGAGGTATGACTGTGGATTTAATTGGGTTCAACAGTTGGTCAATTTGGTGGGCAATGATATAATATATTAGTGAGA TGGTGGGGTTGTGGTGCATGCCAGCTTCATCTTGCATTTAATTAGTGGATAGTTCCAGTACCTTACAAGCTTTAGTTCTG GATCTCTAGCTTGTGTTCTTTTTTCTGTCTCTGGTTTTCAGTTACTTACCTATTGTACTCTTCCTTTCTGCTCTTGTATT TGGCCTTAGCCCCCCTTGTGCTAAATTTGAATACAGTTTATCTGATCTTTGACTTTCTGGTTGCTAGCTCTCGCTTGCAG AAAAGATTCAAGGGATCTACAAACTCTTGAAGTGAGTAAAACTGCCGTTCACCTCTCTTGTTAAATTTCATTTATTGACT CTGTTAATTATAGCACTGGTTCTCTCAAATATCAATATTGTATTGTTAATTGAAAAATTGTAAATACTATACCCAGAGTT TGAGATGTGAGTGAGGATATTAATCAGATATTGTTTTCACTATTCATGTTTATTTTCTAATCAAAACCATTTTTTTTTAT TTGTTTCAAGAAAATTAAGATGGGTAGTGTGGATTATTATGTCTTAAATTGAGTATTTTTCAGGTTTATTAACTTAATTT GTCTAATTAGATATGGTTTCTTTCCAGGTAGTTAGCAAAAATATATACTATAACCGATGGAGATCCCTGCTAAGGTCTGC AACCATATTTTTATCATCAGCTCTACAAGACCAGATTGTTTCCAATTTAAAGTTGATCTCGGTCGAGCTCTGACTGATGC AGGATTTAACATTGTACAGAGTGGTGCAGAATATTCACGATCTGTTTTTGAAGCAATTGAGAAAACAAGACTTTCAATTG TGATTTTGTCTGAAAACTATGCAGAGTCTCCGTGGTGTCAATATTCTTGACTATAAGAAGAAATTTGATCAGCGGGTTTT GCCAATATTTTATAGAGTAAACCCCACAGATGTAAAGTATCAGAAAAATAATTGTGCTTTTGCCATGGAACGACTGGAAT CAAGATATGGAAAAAACTCTCCGGAGGTAAAGAAATGGAGATCTGCTTTGCATCAAATTTCTGAATTAAAAAATGGGAAG TGTTACACGGCAGACAGGTACGTTACTTGCAATAAATTTTACGTAATTCCCCATAATTGATTTGATGCTATATATTATAG TCTACTACTTGTTAAATCGGGTTTTGTTATTATTGTTAGAAGCCCACACTGGTTAGAGATATGACTAAACAAGTGTTTAT AAAGGGTAGAGCAGTCTTCAACTCTTGAGCTAGCTTAAGGGTTGAGGTAGACCTCCCGAATTCCAATATGGTAGGGTAGA GCAGCACTCAACTCTTGAGCTAGTTTTTGGGTTTTTTATGATAACTTTTTTACTTGTTATAAATTATAACTGTTTTTTTT ATTGAATAGAAAGTACAAAGAAACAAAAACCGTGTCCATATATATAAAACTGAATTGAGAAACCTTGGCTTGCATATGCT TTTATAGGAATCAACGTGAATTCATTCAAGAGATTGTAGAAATAGCCCATGAGCACATAGGTTTCTTGTCCACCACAAGA TCTGCAAAGTCTTCATGCCAACTCTCCACTACCAGCTATGGAATTACAAGTTTACGGTCCTTCCCTACTGGAACTGGAAA CGAGTATTATTACTATTTCGACTCTATAAAAGAGGCTTCAAGAAAACTTCTGGATGCATTGCAAGATGATACTTGCTATA CTATCGGAGTATGTGGAAGGAGGGGCTCTGGTAAAACATCATTAGTGAAAGCTGAAATAAGCAGCTACGGAAAGATTTTT GATAGAGTTATATTTCCCAATGTCTCTAAAAATCAAGATATCAGGAGCATTCAAGATGCAATTGCTAATTCATTGAATGT GTATTTTGAAAAAAATGACAGAGATGCTGTAAGAATAATGAAAATGTTTTCGAAAATAGAAAGGATGGATGGAACAACTC TTGTCATCTTGGATGATTTTCCAAGGGAGTATACACCTCAGGAGCTAGGTATTCCTTATAATAACAAGCACTGTAAGGTC ATTTTGACCACACGTGATGAATTAGACTGCCCCGCTATGGGGTGCAACCACTCAATTCTTCTGAAACCCTTGTCTAATGA TGAAGCTTGGACGTTGCTACAACATCTTTCAGGTGTTAACTCGCAACTTGATCTGCTTGATGTGGCGCGAAATGTTGCTT TCAAATGTAATGGTTTGCCTGGTTTGATTAAAGATGTGTCGTCTTCCTTAAAAAAGAAGCTCAATATTGACCAGTGGAAT GAATCATTAATCAGTTTAAGCCACTCAACCGCTCGTTATCAGATTTTTATCAGTTTTAGAGGGGAGACTCGTCATGTTTT TACAAAGCATCTCTATGATGCTTTGTGCCAGGAGGGATTCAAGACATTCATGGATGACAAATCACTCGAGGGTGGTGTTC CAATTGAGAAACTTCTTGATGACATTGAAGAATCAAGGTTTTCAATCGTTATTTTATCTCCAAACTTTGCAGACTCTGAA TGGTGTCTTAGAGAACTTGTTCAAATTCTTGACTGTAAAGATAAGGAGGAGAAGAAGCAATTAGTTTTGCCAATATTTTA TGATGTGGAACCTGGACATGTAAAGTATTTGCAAAATAGTTATGGAGAAGCCATGGAAAAACATGAAAAGAAGTTTGAAC AACATCCTGAGATATTACAGAAGTGGAAGAATGCTTTGCGTGATATCTGTAAGCTGACCGGATTCAAAAAACCTGACGAC TGGTACGCAATATACTTTTAAGAATTGGGATTGTCTAAATCATCTAAGAAAATGTTGGGTAAAACCATCCGTCATAGGTA GTCCAATAATATTTTGACATGTCATGACTTATAATTTTCTAAAACAAGTCAAAATATTATTAGGCCATCTAAGCCTATGA TAATTTAACCCAAACTTCAATTTATCTTTAGTGATTTAGACAACTCCTTCAAAATTACAAAATTTATTTTAAAAACCTCT CTGTTTTTAGTAGGATTTCATAATTAATCTCTTTTGTTTGAGTTTGAATAAATAAATCGAAAGGTGTTGTATATACTTTG CAGGGCCAGAGATGAATTTATAAAAAGGATATTAAGATTTTCTTGTGAAAATAGACATCGCCTGCATATACAATCTATGT ATATGAACTAGAAAGACTTCAGGCAGGCAGGACAAGCAAGCTCGTGTGCAATGTGTAAAGAGGCTGAGGAGAGCACCAAC CACTTGCGTTTTAATTGCAAATTTGCATGGATAGTTTGGATGAAAAGCTATAGTTGGCTAGGAATCCAAATTGTCTTGCC CCAACATTGCAGCAGTCACTTTAAACAACAGTGGCGAGAGGGGAACATTAGCAAACAATTGAATTGGTGGGTAATGTGGT GCACTTGCATATTGTCCATTTGGCTAGCCAGGAATGAGGTAGCTTTTAAGTCAGCGGAGGCGGATGTGGATAAGGTAGTT GATTCAATTCAGTTCAGATCCTGTAAATGGATTCGATATAAAGTGAAGGGTTTCTTGTACTCCTTCTATGAATGGTATAT GAACCCCGTCTTATGCCTGAAAGGGACCATTTAACACCACTTGGAATGGGCTCAGGATGTTGCAGGGGGAGCAGCTCGGA ACCAGGATCTTCTGCAGATTGCAAAAGAAAATGAAAGAGAACTAGAAGTTTAATCCAGAAGAGTTTGGCTACATATTCTG GATCAGTTGAAGGGCATTGGAAACACAATGAAACTATGTTACAAGGAAATGCTGTGATGTCAAGGACCTCCTTAAATGCT AGAAGAACCTTGTATTCGAGATTCTGGTGGGTGATTGCAATTGTCATTGGAACTTTGTGAAGGCTGGTCCACATGTGCTT TTGAACGAGACAATTAACTCGGTGGAGAAAATAATGCTGTTTCTGCTATGCTGTTTGGGGAAAAGGTCTGATGTAGATAG TTGATGTATAATAGGATCAAAAGAGAGAAAAGGTAGAGGGGAAGGGGATTTATTGAATTGGTCTTTAGCTATGTTGCTGT CATTTATGTTTTGCTCTTTTATTTTCCTGTTTTCTGCAACTGTTGCTTCTTGGCTTTGAGTTAGCTAAGTACCTTGGTTG CTTTTTATGCTTTTCCAATTTGTATTTGGGTTTAGCACCCCTTGTGCTTCCTTATATGAATTGTTTGCCTTCCAAAAAAA ATACTAGAAAGACTTCAGCATCTCTTACAAAGTTACAAATGAGTGCAGCTCAAGGTAGAACTGGTTGAAAATAGTTACTA CTCATAAATGGACTGTGATAATTTATTTTGGAGATTTTTCGCAGAGTAATGATTTATCCTCTTATTAGTACTTATGCTGG TGCAATGCACAAATAATATTTTCCTTAAAGATTATAAAGAATCATTTTTTTTTGTGTCGTGTATTGGCCAAGGTTATAGA AGCAATTGCCTTAGGCTACAGAACCTGCATTGTGGAGATTACTATGGGCTATGCAGCAAGAGATTATGGAAGCAGAAGCC AGAGAAGCTCTGTGGCGTGAGGAGTTGGTTGAGGAGATAGCAAAAGGTTGGAGGGTTGAAAGAACTTGAAGAACCAAGCA CGAAAGAGGAAGTACTCAAGTGATGCTTCATCAATGTGTATATAAAGTTCATTATAGGAGCAAATTTTTATGCTTCATTT TTAAACATGAAGCATAAAAATCTCATCTCCTTTAATCCGCCACCCCTTTGCTTCTCTTTTTGTCTTCTGACTCCTTCCCC TTCGATTCGTTGGACTGCTGGAGCAACAGAACGGGATTCAGGGTGCTATTTTTAACTGCAAGAGGTCCATTAATGTCTCC AGAGGTAAATTGTTCTTTTCTCTTTCGTCCACTAAGCTGGGGACCATTTTTTTTTTGTTTATTGTTATTATTCTTTTGAA GATTCTTTAATTCTGTTGACATAATTGCACATTTGTACAAGCTTAGTGAATTACGAATAGTCTAATACTATTGGTTGCCT CATATTTTTACCTTTTGTGTATTGAATTTGGGAAAATCAAGCTCCATGCTTTGCATTTTCAGATGACAGTGTATTCTTCC TATGAAAGCCTATGAATTGTAGTGTATCTACTTAGATGATCCTTTGGATGCTATCCTTGCCCGCCCACATTCCTACTGAG GTCAGCTACTCCTTTTATTAATTTATCTTTTGGGGAGTTTTACAATTTAGTTTTTGAAATTGTGAATTTGTGCCCATGCA TTGGTAGTTTGGTTTTTAGGTGGAATTGAAAAAATTTCTACTTTAAAGGGCATTGTCTCTATAAATGAACAAATGCCATG GCAGGTTGCATGAAAGTGGACACAAGCTAATACATTTAGAGCCTGCCGCACCTTACATTGAGGTGACCTCATTGTGAAAC AAGGTGCCTTTCTTTCTTCATTTTTCTTTTAAATATTGGCAGCAAACTGAATCTTATATGGATTTTCATATTGACACATC CTTAAATGTAAATTACATCCCAGCGATGCTACTAATCCCCTGCTTGGTGGATTCTTAAATTCAATAAACTCTGAAGGAAT GTTGGGTCAGTAGCTACCAAGTGCGTTGTCCATGAAAATGTATGAAGGAATGAAACACCATCAATCAATGGATTCAAAGC CATCTCAAGCATTGTTTTACCTGAAACAATGAAGGTTATATACTGAGTTAAAAGAATTTAGCACATGATAGAAAGTTTGT GTGTACAGATTTGGTGACTATGTTTGTACTTATTCAAATTGCTAAAGGAAGGCTTTTCAAGGTACATTTTGTGTGTGAAA GTATTTGATGTAATACTGAGCCATCGTTGAAGAATTTAATTTAATTGAAATGAAAAATGGCCGCACTAACAGAGTCATTG TGGAACATTTGCACTATTCCTCACTAACTCTTACTACCCATCTATCTCCAACCTTGACTTTTACTTGGGAATCAACTGGT TTGGCATAGCAGAGTAAATGGATTCTGAGTTGAAACTGAGTTCCTCCCTCAGGATCACTCTTTTCTCATACCAACTGATC GTAGAGTATGCGCCCCATAGATGACTGATCAGTAGCCACTCCCCAGATCTGCCTTTCATTACCAGTTTCCAATCACAATA AAGAGAAAATCAGTCGCATTATTTTATTTGTTAAATTTACATAAAATCCAAATTGTGGTTTCAGGGGAGAAATGGGGAAT ACAATTATGTAATGCAATTCGCGATTGAGGTCCTATATTTCATGCTTTGTGTTCAAAACATACAGGAACATGGCACCACA AAAGAAACATTAGTGACCATTAGGCACCATTATAGGAGGACGACACTCTAGATAATATTTTTAATAGGCTAGGGAAGTGT CTTTTAATTCTGACTTTGACAAAGGTGATGAAATATCTAATACGAAGTGTTTTTCTCGAAATCTAAATCTAAA
CDS sequence (LotjaGi1g1v0221800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAGAGTCTCCGTGGTGTCAATATTCTTGACTATAAGAAGAAATTTGATCAGCGGGTTTTGCCAATATTTTATAGAGT AAACCCCACAGATGTAAAGTATCAGAAAAATAATTGTGCTTTTGCCATGGAACGACTGGAATCAAGATATGGAAAAAACT CTCCGGAGGTAAAGAAATGGAGATCTGCTTTGCATCAAATTTCTGAATTAAAAAATGGGAAGTGTTACACGGCAGACAGG AATCAACGTGAATTCATTCAAGAGATTGTAGAAATAGCCCATGAGCACATAGGTTTCTTGTCCACCACAAGATCTGCAAA GTCTTCATGCCAACTCTCCACTACCAGCTATGGAATTACAAGTTTACGGTCCTTCCCTACTGGAACTGGAAACGAGTATT ATTACTATTTCGACTCTATAAAAGAGGCTTCAAGAAAACTTCTGGATGCATTGCAAGATGATACTTGCTATACTATCGGA GTATGTGGAAGGAGGGGCTCTGGTAAAACATCATTAGTGAAAGCTGAAATAAGCAGCTACGGAAAGATTTTTGATAGAGT TATATTTCCCAATGTCTCTAAAAATCAAGATATCAGGAGCATTCAAGATGCAATTGCTAATTCATTGAATGTGTATTTTG AAAAAAATGACAGAGATGCTGTAAGAATAATGAAAATGTTTTCGAAAATAGAAAGGATGGATGGAACAACTCTTGTCATC TTGGATGATTTTCCAAGGGAGTATACACCTCAGGAGCTAGGTATTCCTTATAATAACAAGCACTGTAAGGTCATTTTGAC CACACGTGATGAATTAGACTGCCCCGCTATGGGGTGCAACCACTCAATTCTTCTGAAACCCTTGTCTAATGATGAAGCTT GGACGTTGCTACAACATCTTTCAGGTGTTAACTCGCAACTTGATCTGCTTGATGTGGCGCGAAATGTTGCTTTCAAATGT AATGGTTTGCCTGGTTTGATTAAAGATGTGTCGTCTTCCTTAAAAAAGAAGCTCAATATTGACCAGTGGAATGAATCATT AATCAGTTTAAGCCACTCAACCGCTCGTTATCAGATTTTTATCAGTTTTAGAGGGGAGACTCGTCATGTTTTTACAAAGC ATCTCTATGATGCTTTGTGCCAGGAGGGATTCAAGACATTCATGGATGACAAATCACTCGAGGGTGGTGTTCCAATTGAG AAACTTCTTGATGACATTGAAGAATCAAGGTTTTCAATCGTTATTTTATCTCCAAACTTTGCAGACTCTGAATGGTGTCT TAGAGAACTTGTTCAAATTCTTGACTGTAAAGATAAGGAGGAGAAGAAGCAATTAGTTTTGCCAATATTTTATGATGTGG AACCTGGACATGTAAAGTATTTGCAAAATAGTTATGGAGAAGCCATGGAAAAACATGAAAAGAAGTTTGAACAACATCCT GAGATATTACAGAAGTGGAAGAATGCTTTGCGTGATATCTGTAAGCTGACCGGATTCAAAAAACCTGACGACTGGGCCAG AGATGAATTTATAAAAAGGATATTAAGATTTTCTTGTGAAAATAGACATCGCCTGCATATACAATCTATGTATATGAACT AG
Protein sequence (LotjaGi1g1v0221800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQSLRGVNILDYKKKFDQRVLPIFYRVNPTDVKYQKNNCAFAMERLESRYGKNSPEVKKWRSALHQISELKNGKCYTADR NQREFIQEIVEIAHEHIGFLSTTRSAKSSCQLSTTSYGITSLRSFPTGTGNEYYYYFDSIKEASRKLLDALQDDTCYTIG VCGRRGSGKTSLVKAEISSYGKIFDRVIFPNVSKNQDIRSIQDAIANSLNVYFEKNDRDAVRIMKMFSKIERMDGTTLVI LDDFPREYTPQELGIPYNNKHCKVILTTRDELDCPAMGCNHSILLKPLSNDEAWTLLQHLSGVNSQLDLLDVARNVAFKC NGLPGLIKDVSSSLKKKLNIDQWNESLISLSHSTARYQIFISFRGETRHVFTKHLYDALCQEGFKTFMDDKSLEGGVPIE KLLDDIEESRFSIVILSPNFADSEWCLRELVQILDCKDKEEKKQLVLPIFYDVEPGHVKYLQNSYGEAMEKHEKKFEQHP EILQKWKNALRDICKLTGFKKPDDWARDEFIKRILRFSCENRHRLHIQSMYMN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 5 | 99 | 95 | 3.1E-16 | ||
| PANTHER | 7 | 94 | 88 | 2.5E-75 | – | |
| Pfam | 8 | 91 | 84 | 4.8E-6 | ||
| SUPERFAMILY | 12 | 69 | 58 | 9.16E-5 | ||
| Gene3D | 131 | 284 | 154 | 3.3E-15 | – | |
| SUPERFAMILY | 131 | 350 | 220 | 9.84E-34 | ||
| Pfam | 146 | 356 | 211 | 3.1E-26 | ||
| Gene3D | 350 | 523 | 174 | 1.1E-53 | ||
| SUPERFAMILY | 350 | 498 | 149 | 3.01E-37 | ||
| PANTHER | 350 | 521 | 172 | 2.5E-75 | – | |
| ProSiteProfiles | 355 | 496 | 142 | 24.141 | ||
| SMART | 356 | 496 | 141 | 9.1E-41 | ||
| Pfam | 357 | 514 | 158 | 3.4E-35 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. | ||
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of LotjaGi1g1v0221800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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