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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0229700 |
| Transcript ID | LotjaGi1g1v0229700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like protein kinase; TAIR: AT2G31880.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|Q9SKB2|SBIR1_ARATH Leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1; TrEMBL-Plants: tr|V7AZD3|V7AZD3_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0229700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:53783972..53786535) extracted from Lotus japonicus Gifu genome v1.2.
TAAGAACAACAATAAACAAAACGAGGGAAACAGCCAATCCAAATTCTAAACAAAACACCACCACAGGGTAGTGAGTAAAT GGCTGAGAAAATCCACCACCGCCGCCACCACCACCATCACCACCACCGTCATCACCACTTGTTTCTATTCTCATTACTAT CCCTCTTCTTCTCCACCATCCATGCCAACCTCCATCTCCACCCTTCAGATTCCAAGGCCCTTTTAACTCTCCAAAAGGCC TTTGGAGTCAACGGTCAACGCTACCAGACTGTAACAACAAACTCTGCAACCACCACTAACCCATGTAACTCCGACGGCGT GTTCTGTGAGCGGAGGCTCTCCGCCACCGAGAACAGCTACGTCCTCCGTATCACGAGGCTTGCCTTCACCTCCCACCACC TCACTGGCGTACTTTACCCTGCAATTGGCAACCTCACAGAGCTCAAAGAGCTCTCTCTCTCAAACAACAACCTCGTTGAC CGAATTCCTCCCCAAATCGTTGACTGCCGGAAGCTCGAGATTCTCGACCTCTCCAACAACTACTTCTCCGGCAAAGTCCC GCCGGAGCTCTCCTCCCTCATCCGCCTCCGCATCCTCGACCTCTCCTCCAATAAGCTCTCTGGCAACCTCAATTTCCTCC GGTACTTCCCCAATCTCGAAAAGCTCTCCATCTCCGATAACCTCTTCACCGGAAGAGTTCCCGCTTCGATACGCTCCTTC CGCAACCTCAGACACTTCAACTTCTCCGGGAATCGCTTCCTCGAAGGCTCTCAGACGCATAATCACAAACACCTTGCAGG CAACAGTGATGAGGTTCTTCCCAAACGCTACATCTTCGCTGAGGATGTAAGGAATGGTGAAATTGGTTCTCCTGCACCGT CTGCACATGCTCCATCTTCATCCCGCAAGAGGAAATCCAATTCCACGGTTGCGGCTGCGGCAGCTCCTGGTCCTGCTCAC CACCACAAGCACAAATCAAGTAAGAGGAAGCTTGCAGGGTGGATTGTAGGGTTTATAGCTGGGGCTTTTGCTGGGACTCT TTCAGGGTTCATATTCTCTTTGCTGTTCAAATTGGCTTTAGCTTTGATCAAGGGTAGAGGGAAGGGTTCAGGGCCTGCTA TTTATAGCTCATTGATTAAGAAAGCTGAAGACTTGGCTTTCTTGGAGAAGGAAGATGGAATGGCCTCTTTGGAATGCATT GGAAAAGGTGGTTGTGGAGAGGTTTACAAGGCGGAGTTACCCGGAAGCAACGGCAAAATGATTGCCATCAAGAAGGTTAT TCAGCCTCCTAAAGATGCAGCAGATTTAGCAGAAGAAGACAGCAAGGCTCTGCATAAGAAGATGAGGCAGATAAAGTCTG AAATCAACACGGTCGGTCAGATTCGACACCGGAACCTTCTGCCTCTGCTTGCTCATGTTTCCAGGCCTGATTGCCACTAC CTTGTGTATGAGTACATGAAGAATGGGAGCTTGCAGACTTGTTTGGAGAGAGTAGATAATGGTGAGATGGTGTTGGATTG GATTTCGAGGCATAGGATTGCTCTTGGTATAGCAGCAGGGCTTGAGTACCTTCACGTGAGTCACAGTCCTCGAATCATTC ACCGCGACCTCAAGCCTGCAAACATCCTTCTTGATGATGACATGGAAGCTCGAATAGCCGATTTCGGGCTTGCGAAAGCC ATGCCTGATTATCAGACACACGTCACAACTTCGAATGTGGCAGGCACTGTGGGGTACATAGCACCAGAGTATCACCAGAT ACTCAAGTTCACAGACAAGTGTGATATTTACAGCTTTGGGGTTATTCTTGGTGTTTTGGTGATAGGGAAATTGCCTTCAG ATGATTTTTTCCAGCATACTGATGAGATGAGCTTGGTCAAGTGGATGAGAAAGATGATGACTACAGAAAATCCCAAGGAA GCAATTGATACAAAGCTTTTGGGTAATGGGTTTGAGGAACAGATGCTTCTGGTTCTCAAAATTGCTTGTTTTTGCACCAT GGATGACCCTAAGGAGAGGCCTAACAGTAAGGATGTTAGGTTGATGTTGTCACAGATCAAGCACTGAGTCCCCTCAGCTT GATAAATAATGTGTGTATAATGTTTGTGCTAAAGTTAGCGTGTTTAAGAATATGATTGATAAATGTTGGTTCGAAAGGTA AATGAACCAATATAAGTCTATTACCTTCATCACTGAATGCTGAATTTATAGAAAAGAAAAGGTAGAAAGAAAATTCAGCA TTGTGATGATATCTATCATATGTCGACTATGTTACAGTTCAATGTTTATGTATTGTTCCTGATATAGAAATAATCCCATG TTACCTTATTTTTGTCCATAAGCATCCTTTCAGCATTTGTATACTAGCACTAAACGTCTTAAATTCAAATCATATTTGAT GCTATACTGTAAATTTGAAAGAAGAAGAGGAAGATGATAGAGGGAAAAGCAGAAGGTTACAAGTATCTAAACAAATGCTT CTGAAATCTATAAGTTATTGAGGAAGAATATTCTCCATTAAGTAGCATGCATGTGGCTAATACCATCTAATAGTCTAAAT CAGC
CDS sequence (LotjaGi1g1v0229700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGAGAAAATCCACCACCGCCGCCACCACCACCATCACCACCACCGTCATCACCACTTGTTTCTATTCTCATTACT ATCCCTCTTCTTCTCCACCATCCATGCCAACCTCCATCTCCACCCTTCAGATTCCAAGGCCCTTTTAACTCTCCAAAAGG CCTTTGGAGTCAACGGTCAACGCTACCAGACTGTAACAACAAACTCTGCAACCACCACTAACCCATGTAACTCCGACGGC GTGTTCTGTGAGCGGAGGCTCTCCGCCACCGAGAACAGCTACGTCCTCCGTATCACGAGGCTTGCCTTCACCTCCCACCA CCTCACTGGCGTACTTTACCCTGCAATTGGCAACCTCACAGAGCTCAAAGAGCTCTCTCTCTCAAACAACAACCTCGTTG ACCGAATTCCTCCCCAAATCGTTGACTGCCGGAAGCTCGAGATTCTCGACCTCTCCAACAACTACTTCTCCGGCAAAGTC CCGCCGGAGCTCTCCTCCCTCATCCGCCTCCGCATCCTCGACCTCTCCTCCAATAAGCTCTCTGGCAACCTCAATTTCCT CCGGTACTTCCCCAATCTCGAAAAGCTCTCCATCTCCGATAACCTCTTCACCGGAAGAGTTCCCGCTTCGATACGCTCCT TCCGCAACCTCAGACACTTCAACTTCTCCGGGAATCGCTTCCTCGAAGGCTCTCAGACGCATAATCACAAACACCTTGCA GGCAACAGTGATGAGGTTCTTCCCAAACGCTACATCTTCGCTGAGGATGTAAGGAATGGTGAAATTGGTTCTCCTGCACC GTCTGCACATGCTCCATCTTCATCCCGCAAGAGGAAATCCAATTCCACGGTTGCGGCTGCGGCAGCTCCTGGTCCTGCTC ACCACCACAAGCACAAATCAAGTAAGAGGAAGCTTGCAGGGTGGATTGTAGGGTTTATAGCTGGGGCTTTTGCTGGGACT CTTTCAGGGTTCATATTCTCTTTGCTGTTCAAATTGGCTTTAGCTTTGATCAAGGGTAGAGGGAAGGGTTCAGGGCCTGC TATTTATAGCTCATTGATTAAGAAAGCTGAAGACTTGGCTTTCTTGGAGAAGGAAGATGGAATGGCCTCTTTGGAATGCA TTGGAAAAGGTGGTTGTGGAGAGGTTTACAAGGCGGAGTTACCCGGAAGCAACGGCAAAATGATTGCCATCAAGAAGGTT ATTCAGCCTCCTAAAGATGCAGCAGATTTAGCAGAAGAAGACAGCAAGGCTCTGCATAAGAAGATGAGGCAGATAAAGTC TGAAATCAACACGGTCGGTCAGATTCGACACCGGAACCTTCTGCCTCTGCTTGCTCATGTTTCCAGGCCTGATTGCCACT ACCTTGTGTATGAGTACATGAAGAATGGGAGCTTGCAGACTTGTTTGGAGAGAGTAGATAATGGTGAGATGGTGTTGGAT TGGATTTCGAGGCATAGGATTGCTCTTGGTATAGCAGCAGGGCTTGAGTACCTTCACGTGAGTCACAGTCCTCGAATCAT TCACCGCGACCTCAAGCCTGCAAACATCCTTCTTGATGATGACATGGAAGCTCGAATAGCCGATTTCGGGCTTGCGAAAG CCATGCCTGATTATCAGACACACGTCACAACTTCGAATGTGGCAGGCACTGTGGGGTACATAGCACCAGAGTATCACCAG ATACTCAAGTTCACAGACAAGTGTGATATTTACAGCTTTGGGGTTATTCTTGGTGTTTTGGTGATAGGGAAATTGCCTTC AGATGATTTTTTCCAGCATACTGATGAGATGAGCTTGGTCAAGTGGATGAGAAAGATGATGACTACAGAAAATCCCAAGG AAGCAATTGATACAAAGCTTTTGGGTAATGGGTTTGAGGAACAGATGCTTCTGGTTCTCAAAATTGCTTGTTTTTGCACC ATGGATGACCCTAAGGAGAGGCCTAACAGTAAGGATGTTAGGTTGATGTTGTCACAGATCAAGCACTGA
Protein sequence (LotjaGi1g1v0229700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAEKIHHRRHHHHHHHRHHHLFLFSLLSLFFSTIHANLHLHPSDSKALLTLQKAFGVNGQRYQTVTTNSATTTNPCNSDG VFCERRLSATENSYVLRITRLAFTSHHLTGVLYPAIGNLTELKELSLSNNNLVDRIPPQIVDCRKLEILDLSNNYFSGKV PPELSSLIRLRILDLSSNKLSGNLNFLRYFPNLEKLSISDNLFTGRVPASIRSFRNLRHFNFSGNRFLEGSQTHNHKHLA GNSDEVLPKRYIFAEDVRNGEIGSPAPSAHAPSSSRKRKSNSTVAAAAAPGPAHHHKHKSSKRKLAGWIVGFIAGAFAGT LSGFIFSLLFKLALALIKGRGKGSGPAIYSSLIKKAEDLAFLEKEDGMASLECIGKGGCGEVYKAELPGSNGKMIAIKKV IQPPKDAADLAEEDSKALHKKMRQIKSEINTVGQIRHRNLLPLLAHVSRPDCHYLVYEYMKNGSLQTCLERVDNGEMVLD WISRHRIALGIAAGLEYLHVSHSPRIIHRDLKPANILLDDDMEARIADFGLAKAMPDYQTHVTTSNVAGTVGYIAPEYHQ ILKFTDKCDIYSFGVILGVLVIGKLPSDDFFQHTDEMSLVKWMRKMMTTENPKEAIDTKLLGNGFEEQMLLVLKIACFCT MDDPKERPNSKDVRLMLSQIKH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 36 | 36 | - | – | |
| Phobius | 1 | 20 | 20 | - | – | |
| Phobius | 21 | 40 | 20 | - | – | |
| PANTHER | 21 | 660 | 640 | 2.9E-181 | – | |
| PANTHER | 21 | 660 | 640 | 2.9E-181 | – | |
| Phobius | 41 | 304 | 264 | - | – | |
| Gene3D | 43 | 187 | 145 | 1.3E-30 | ||
| SUPERFAMILY | 97 | 227 | 131 | 6.59E-32 | – | |
| Pfam | 121 | 180 | 60 | 7.1E-9 | ||
| Gene3D | 188 | 241 | 54 | 3.1E-7 | ||
| MobiDBLite | 262 | 300 | 39 | - | – | |
| MobiDBLite | 268 | 282 | 15 | - | – | |
| Phobius | 305 | 330 | 26 | - | – | |
| TMHMM | 305 | 327 | 23 | - | – | |
| Phobius | 331 | 662 | 332 | - | – | |
| Gene3D | 354 | 459 | 106 | 1.2E-15 | – | |
| SUPERFAMILY | 364 | 657 | 294 | 9.44E-72 | ||
| ProSiteProfiles | 368 | 662 | 295 | 38.605 | ||
| SMART | 368 | 661 | 294 | 8.9E-36 | ||
| Pfam | 371 | 651 | 281 | 9.5E-43 | ||
| Coils | 408 | 428 | 21 | - | – | |
| Gene3D | 460 | 662 | 203 | 1.6E-57 | – | |
| ProSitePatterns | 506 | 518 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0229700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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