Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0230900 |
| Transcript ID | LotjaGi1g1v0230900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ufm1-specific protease 2; TAIR: AT3G48380.1 Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2; Swiss-Prot: sp|Q9STL8|UFSP_ARATH Probable Ufm1-specific protease; TrEMBL-Plants: tr|V7B0G2|V7B0G2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0230900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:54127101..54133459) extracted from Lotus japonicus Gifu genome v1.2.
CTTAAATTTACTCGTCATTTTTTCTTACCAAGAAGAAAGTAGAGTCGTGAAACGGGTCAAAGTAAATAAATAAGTTGAAA AGAACAGAGAGAGGAAGCAGTGTGTGTCCATGGCGGAAGAGAGCAATCGCATTCGCAGCGTGAGACTGCTATGCCGCCAC CCAAAGCATCTCAACAAAGGATCCGACCCGGGAACCCACTATTGGCTTATCGGATCCCCATTCTTACCGCCACTCACCAT CGTCTCCATCCTCCGATCCTCTTCTTCTTCCCCAGATTTACGCAAGGAATCCGAGGACCTTCAAACCTTCATTCCCAAAG GCTTTGAAGTCATCGGAGCCCTTGCCTCCGGCGACGCCACCGATGCCCGTGCTGCCATCGACGCTGCCCGTGGATTGAGG AAGCTCCTTTACGGCGGAGGAGGAGGAGGAGCGGGGGAAGACCAACCGCTGATCGGAGCGGTTTCGGGGCCGGATTCCGG TGAACTGCGGTTTTTTGTGTCTGAGGGTGGAAATGCGACTAGCCTTGAACCTGTTACGTCTGTGGTACATGAACAGCACC CGGAGAAGCTTGTGTGGGAGAATGGTTGCTTGCTTCGTTGTGAGCTTCCGATTAAGTTGCCACTATATTACCCTCTCAAC AATCCAACTGGTAGGTTCTCCTTTCTCTTCTTATTCTTCTTGTTTTGTTCAATGAATTGACTAGTTCTGCAATTGGGTAA TGTATATTGGATTTCACATTTGTCATTTTCTAATCTCCAAAATGTTAGTTTGAAATTTAGAATTGGCAATGTTGTGCTTT GTACTGTTTCAAAAACCACTTCAGGTTTGTATTGGCCAATCGATACCAAGGTCAAATCACTTTTTTTTTATAAGCAAAAT GCATTGATACAAGCAGGAGGGGTGCTTGAACATTAGTAGAGATAAATACATCAATGCAGAACCAAACAAGTTCAAATCAC TTATATATTTATGTTGCATACAATTGTCTGTTTGCAAGTTGAGTTTTGGAGGGAAGGAAAGGGAGAGCCCTTCCATTGTT TGAGAGATTTTAAGAAGGAGGGGAAGGGTTTGGTTTATTTCTATAAACCCTTCAAAAACCCTCCAAAACCTCTTCTAGTT ATATTTTTTACTTCCCCCTCCCCCCTCTCTTGCCCTCCCCTTCCTTTCCGCTCAAAGCCTCCCTCTCCCCTCCCCTAAAA ACTCACCAACACACCCTTAATAAACAAAATAAGGCGTAGGCTTTGTGAGGCGTGAAGTGGTTATTGGGCAGGATACCGAG TTCAAGTTGCTCTCTCTGTCTTGCTTTGATCGAATAGTACCTTTCTTGATGGAAGTGATGGAGCACAGAATTCGTGCAGT ATGCAATGAAAGGTTTAGCTGAAAGTACTGTAATTTTAGTTCAAGATGCTATACAAATATTACATATGAGAGAGATAAAA GAAAAACTGGGACATGAAGTATAGTGGGCACAAACTAAGATCTAATGTTGAATTGGACATAAATTAAGCAGTCAATTATA TAAACCTTTATTCAATTTAGTGTAAAATAAATTGTGTAGGTCTTACTGTACTGCTGGGCAGGATAGCATCTGGATGTTGG TGAATTATAAGATGCATATTACACTATGTTGTATGTTCTAATTGCGGTAACTGAGTACAAATTTTGTTCCACAGATATTG AGAAAGCATATGTACGGGCAACGGAAGCTGTTATTGCCAAGTTAAGAGACCCTCAGGCTGTGTACTTATTAGAAACGTTT AACAAAACCTCTCCAGATCTACCTCCACCTGCCATAATTCGAGGTGTACAATTAGACTTTTGTGCAGACCTCTCCAAGAT CAGGCCTTTAACTAAGGGTGATGATGGCTTTGATGCAAGCTCACTGTTGTGTTCGTACTTTTCCAACAAAAGTAAAGCAG GCTCAGAGGTTTTTTCCGTAGAGGTATTATTCTTTTTGATCTTTGACCCATTTTCTTTTTAACTGTTTATTTTTTTTGCT TATATTGTCTTATTAGTTATTGTATTTATGATTTAGTCTGTGTCTGGTCCTTTTCCCCTTTTTACCATGTGCTTTATGAA TAGTCAAATGACTACCGTCGTCCGTTTTTTGAAATTTCCTTTTGCTTAGAATGCAGATACCATCCATGTTGGTGTTCTTT TTAGTAGCGTAGGGCCATCATCAGCATTTGCACCTGTTGCAGAATATCTTCCAGGTCAGGATTTATACTTGATGTGCAAT ATTTTCTCATTGGAAATTATGATTTACTTTACTTTTGTGTTTTTAGCATTTTTCAATTATTGCTTTCAGCCCAGGAAGAA GCTAGCCTCCTTGTTGTGGATATTAAGCTAGACGTACTCTGCTATTCTTCTTGGAATCTTCCATTGAGATATGCAGTATC TAGTTTAATCATCCCTGGCTTAATTGACCAGTTAAATAACCTGCAGACGTCGATGTTGCCTAACCTTTTGGCACAACATC CTCAGGTGAGGCTGTGCATTCATCTTTCCAGTTACATAAGCTTGCCTTGGTTCTACTATTCCACCTTGACTCCAATTCCC ACGATCATCATTTTCCTATAGTTAATGGATGTAAAGTTACTTATTGTCATTTCTCTATCCTATATTTGCCCAATTTGTGA TAATCTTCTGGTATGTTTGCAAAATGCAAATACATATTACATAACTCTCAAATATGTATGTTATTTACTTGTGTATACTC ACAGATGAAAGCGGCAGAATAAATCAATTATTACAGTCTTTATTTGTGTGTGTGGTGTGCGCACGTTTATGTATGTATGT ATGTATGTACGTATGATCATTCAGCCACTCATGGATTGTCAATGCATGTCTTTATTTATGTATAATATGTATATATGTAT TTTCTTATGATCATTGAAGCGCAAATGGGTCGTCAATACATGTTTGTATTTATGTATAATCTTCAACCATACATGGATCT TCAAGAATTAACTTCTCTCATACTCTCAACAAATATGCTACATTCCAATGCCATAACATTTGTCTGAACCTAATCAACCT ATTCTGCTACATATTATCTCATATTGAAATTAAGATATGAAGAAAATCATTATTCCTCTGCAAAACACTCTAGTGATTAT TATATGTGATCAATTTGAAACTCATGAAAAAAATGATTTTACTTGTGTCAATAATATGTAGTAATTTCTGTTTTATTCGT TTTTTTCACCTTTTTTATTCATTTAGTTAACATTTTTTATCATGCTGAGGTTTTGTTTTCACATATTTATATAAAACTTA CTGTTCTTATGATTGAATCACAATTTATTTGATTGTCAGCTAAAATGTTATCACTTTAGTCCTCCTGGGATTCTGCATCC AGTAACTGTTTTCTATGAACTGAGTTTTGGGGAGACAGAAATGAAGCAAGGTGTGCTGCTGAACTCTAGAATGGATAGGA TTCTTCACTTATACTTGTGTATTGTGTACTGTTGGTAAATTTCAGAATGGAATTTATCTATTGAATGTGCAGGGGTTTCT GTTTTGCTTTTTCATATATGATCCCAGCATGGCTCGATGATTTATGAATTGTTTGTGGTTTCTGCAGTTGAAGTTAGGAG ATCCTTGCACTCAAGGTTGGGACTACCTTATGATCGTCCCCTTCTAAGAATTGCTAATGCCCTGGATTTCTCAAAATTGA AAAACAGTGGTATTGTCTCTCTACAGAAAGGTAATATGTACATCTAAATGAAAAGTTCTTTAGGCTCTATAGTTGCTGAA AATCATTGTTATATCTGTCTTTTTCCTTTTTGTATTTTCTGGTGATAACTCCTTCACACTTTGTATATTATATATGTAGA CTAATCAATATTTTTTGGTAATATTAGGTTCAGCTTTGCTAAGAGATGTACACATTGGGATTCCAAGCAGTGGGAGTAAG TTGCTATGATAGTCTTTGCTTATTCTTCATATAATTCTTCTGTGTCTCATTTGATATTGTTATGATTTATGCAGTTACTG GGGGAACCGTTTCCCTTGTTCAAGGTTCCTATGAATACTTTCATTATCTTCAGGAAGGATATAATGATTCGGTAATTGCA ATTCTTCTGTTTCATAACGGATGTAACATTTTCTTGAAACTATGTGTCTTCTTTTTCTCCTGGCCTTGCTTGAAATATCT GTGGTGGAAATTTTAAATTCCAAGACTAACACCAGTTGCTATTGCGAAGTAGTTTTAGATTATCAATAGCATAATCTTGT CCTGGCAGTTGCAAATTACTGTTTGGATACATGAAAAATCATTTTAGACCTAGTTTTTTTGTATTATCAGAAGCTAATCA CTTACGCCTGCTTTTCTAGGGATGGGGTTGTGCGTATCGCTCTCTCCAGACTATCATTTCATGGTTCAGACTCCAAAACT ACTCATCCATAGAGGTTCCTTCTCATAGGTATTTACAATTTACTTCTTCTAATGGGTTTTGTTTCCAGGGGAGATATCTT CATTTATTTCTTTCAATTGTCATCACTCATCAGGCTTTAATATTGTGTTGCTGTTCACATTTTATGGATTTGGATTATTA AATTGGTCTGTAAATTAGTCGTTTGTGATTAATTTGCATGGAAGAAAATTTAATCAATCAGTTAGTCTTGCTGATGTTGC TTGTTTAAAACAAGCCTATAAATGATTTATGCATATGATTCAACCTGACAAACCTACAAATGTCTCAGAGAAATACAGCA GGCACTTGTTGAGATAGGTGATAAAGATCCTTCTTTTATTGGGTCACGAGAATGGATTGGGGCCATCGAGTTGAGCTTTG TTTTGGATAAACTTCTGGGTGTAAGTGTTCTGCTTGTTAAAATATTTGTTGATGTTGAATTGTAGGTTTATAAATAACCT GTATGTATACTATAGACGGAGTTGGGCTTTTGGGGTTTCCGTGATTCCGTCCAACCGGACATTGTGCTTATGTTTCTCTC TGGCTAGAAGCCTAGAATCAAGATATGTTGAGCCTCCTATGGTCCCACCCCAGAATAGGGCTGGATTCTAGATAATGATC TGATACTGATACTTAACAAAGGGCTGGGTTCTTAATGATTTTGATAGGGCTTTTTGCTTTATTTAACAGGTTACTTGCAA AGTCATCAATGTTAGATCTGGAGCCGAGCTTCCTGAAAAATGTCGGGAGCTAGCGTTGCACTTTGAGAGCCAGGGTACAC CTGTTATGATTGGTTAGTAGATGCTATATCTTTTTTCCCTTTCGTCTACTTACCTATGGCGTCTCCTACTATGAGTTGGC TTGAAATTCCGCAGTAGTATATTTTTCAGTTGCTTATCCACTTTGCTGTGAATTGTGTTATGTTTGTCAATATTGCTCTG AGAAATTATTGCTAGGTTGGTAGGACCAGTGGTGACACTTCAGTTTCTAAATGCAGGTGGTGGTGTCCTCGCGTATACAC TCTTGGGGGTGGATTACAATGAAGCAAGTGGTGATTGCGCGTTTTTAATACTTGATCCTCACTATACTGGCGTGGAGGAT CTGAAGAAAATAATCAATGGGGGATGGTGTGGATGGAAAAAGGCTGTTGATAACAAGGGAAAGAATTTCTTCTTGCACGA TAAGTTTTATAATCTACTGCTGCCTCAGAGGCCCAGCATGGTTTGATAGAATCGGATTTAGTTGAGGGAACTGACTCCTG TTTGGTGCACAATTTCTTGAAATGGAATGGTAATTTTCTCTAGTTACTTGTGGTTGGGACTGGACAAGTTCGTGTTTGAA AACCCAATAGAGTTTGGTGCACAATTTCTTGGAATGGAATGGTAATTTTCTCGTTACTTGTGGTTGGGACTGGAGAGTTC AACCAGTTCATGTTTGAAAACCCTAGAGTTTAACGGGAGAAGTAATTCTGGGAAAAGCTACTAGGATAGCATTTGTGCGA GTCCGATAAATGATTATGGGAGGATTGAAAGAGGATCCAAACATAAGTTTTTGTTTAAAATCCTCACCTCACTTTCGGGT TAGTGATATTCTTACATTAGCATTATGTGACCATAACTTACATTTAGGCCTTGTTTGGAAGTGTTTTCCAAGTCCATGTT ATAGCACAAGCGCTTATATACGTGTTAGAGCTAGTAATCTACTTATAAGTTGTTTTGAATTTATTTTTATAAACTGCTCA AATTACATTATGAATAAACGCTCATACCTACGTAGAACCTAATTTGAGTTTATTTCAATAACTTTATCAAAACAAGCATT TATGCATCAAGCACTTGTCATAACCGTTTTTAAAGGTGCATTTGTTTCAGATTAAATAATAATGATTTTTACCTGTCTGG AAACAGAGAATAAATTTTAGAGATTTTAAGAAAATCATA
CDS sequence (LotjaGi1g1v0230900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGAAGAGAGCAATCGCATTCGCAGCGTGAGACTGCTATGCCGCCACCCAAAGCATCTCAACAAAGGATCCGACCC GGGAACCCACTATTGGCTTATCGGATCCCCATTCTTACCGCCACTCACCATCGTCTCCATCCTCCGATCCTCTTCTTCTT CCCCAGATTTACGCAAGGAATCCGAGGACCTTCAAACCTTCATTCCCAAAGGCTTTGAAGTCATCGGAGCCCTTGCCTCC GGCGACGCCACCGATGCCCGTGCTGCCATCGACGCTGCCCGTGGATTGAGGAAGCTCCTTTACGGCGGAGGAGGAGGAGG AGCGGGGGAAGACCAACCGCTGATCGGAGCGGTTTCGGGGCCGGATTCCGGTGAACTGCGGTTTTTTGTGTCTGAGGGTG GAAATGCGACTAGCCTTGAACCTGTTACGTCTGTGGTACATGAACAGCACCCGGAGAAGCTTGTGTGGGAGAATGGTTGC TTGCTTCGTTGTGAGCTTCCGATTAAGTTGCCACTATATTACCCTCTCAACAATCCAACTGATATTGAGAAAGCATATGT ACGGGCAACGGAAGCTGTTATTGCCAAGTTAAGAGACCCTCAGGCTGTGTACTTATTAGAAACGTTTAACAAAACCTCTC CAGATCTACCTCCACCTGCCATAATTCGAGGTGTACAATTAGACTTTTGTGCAGACCTCTCCAAGATCAGGCCTTTAACT AAGGGTGATGATGGCTTTGATGCAAGCTCACTGTTGTGTTCGTACTTTTCCAACAAAAGTAAAGCAGGCTCAGAGGTTTT TTCCGTAGAGAATGCAGATACCATCCATGTTGGTGTTCTTTTTAGTAGCGTAGGGCCATCATCAGCATTTGCACCTGTTG CAGAATATCTTCCAGCCCAGGAAGAAGCTAGCCTCCTTGTTGTGGATATTAAGCTAGACGTACTCTGCTATTCTTCTTGG AATCTTCCATTGAGATATGCAGTATCTAGTTTAATCATCCCTGGCTTAATTGACCAGTTAAATAACCTGCAGACGTCGAT GTTGCCTAACCTTTTGGCACAACATCCTCAGCTAAAATGTTATCACTTTAGTCCTCCTGGGATTCTGCATCCAGTAACTG TTTTCTATGAACTGAGTTTTGGGGAGACAGAAATGAAGCAAGTTGAAGTTAGGAGATCCTTGCACTCAAGGTTGGGACTA CCTTATGATCGTCCCCTTCTAAGAATTGCTAATGCCCTGGATTTCTCAAAATTGAAAAACAGTGGTATTGTCTCTCTACA GAAAGGTTCAGCTTTGCTAAGAGATGTACACATTGGGATTCCAAGCAGTGGGATTACTGGGGGAACCGTTTCCCTTGTTC AAGGTTCCTATGAATACTTTCATTATCTTCAGGAAGGATATAATGATTCGGGATGGGGTTGTGCGTATCGCTCTCTCCAG ACTATCATTTCATGGTTCAGACTCCAAAACTACTCATCCATAGAGGTTCCTTCTCATAGAGAAATACAGCAGGCACTTGT TGAGATAGGTGATAAAGATCCTTCTTTTATTGGGTCACGAGAATGGATTGGGGCCATCGAGTTGAGCTTTGTTTTGGATA AACTTCTGGGTGTTACTTGCAAAGTCATCAATGTTAGATCTGGAGCCGAGCTTCCTGAAAAATGTCGGGAGCTAGCGTTG CACTTTGAGAGCCAGGGTACACCTGTTATGATTGGTGGTGGTGTCCTCGCGTATACACTCTTGGGGGTGGATTACAATGA AGCAAGTGGTGATTGCGCGTTTTTAATACTTGATCCTCACTATACTGGCGTGGAGGATCTGAAGAAAATAATCAATGGGG GATGGTGTGGATGGAAAAAGGCTGTTGATAACAAGGGAAAGAATTTCTTCTTGCACGATAAGTTTTATAATCTACTGCTG CCTCAGAGGCCCAGCATGGTTTGA
Protein sequence (LotjaGi1g1v0230900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAEESNRIRSVRLLCRHPKHLNKGSDPGTHYWLIGSPFLPPLTIVSILRSSSSSPDLRKESEDLQTFIPKGFEVIGALAS GDATDARAAIDAARGLRKLLYGGGGGGAGEDQPLIGAVSGPDSGELRFFVSEGGNATSLEPVTSVVHEQHPEKLVWENGC LLRCELPIKLPLYYPLNNPTDIEKAYVRATEAVIAKLRDPQAVYLLETFNKTSPDLPPPAIIRGVQLDFCADLSKIRPLT KGDDGFDASSLLCSYFSNKSKAGSEVFSVENADTIHVGVLFSSVGPSSAFAPVAEYLPAQEEASLLVVDIKLDVLCYSSW NLPLRYAVSSLIIPGLIDQLNNLQTSMLPNLLAQHPQLKCYHFSPPGILHPVTVFYELSFGETEMKQVEVRRSLHSRLGL PYDRPLLRIANALDFSKLKNSGIVSLQKGSALLRDVHIGIPSSGITGGTVSLVQGSYEYFHYLQEGYNDSGWGCAYRSLQ TIISWFRLQNYSSIEVPSHREIQQALVEIGDKDPSFIGSREWIGAIELSFVLDKLLGVTCKVINVRSGAELPEKCRELAL HFESQGTPVMIGGGVLAYTLLGVDYNEASGDCAFLILDPHYTGVEDLKKIINGGWCGWKKAVDNKGKNFFLHDKFYNLLL PQRPSMV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 430 | 647 | 218 | 3.2E-93 | – | |
| Pfam | 449 | 639 | 191 | 1.7E-50 | ||
| SUPERFAMILY | 467 | 603 | 137 | 2.11E-5 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0230900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…