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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0231100 |
| Transcript ID | LotjaGi1g1v0231100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Haloacid dehalogenase-like hydrolase; TAIR: AT3G48420.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|Q94K71|GPPL2_ARATH Haloacid dehalogenase-like hydrolase domain-containing protein At3g48420; TrEMBL-Plants: tr|I3SW77|I3SW77_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0231100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:54172155..54176433) extracted from Lotus japonicus Gifu genome v1.2.
CCACCGAACCCGATAAGTGGAAGAAGAAGTTGAAAAATCATTGGATGTGGAAGGAAAAGGAGCTATTATGGCAATGGCAG CAGCAAGTAGCATCATCTCCGTTTCCTCTGCTTCACTCTTGATCACAACACCCCAACCCAAAACGCAAACCATCCTCCTA AAACACACACATGAACATCATCATGTTCCAACATCCTCTTTGACAGGCACATCAACACTTGCTTCTCTCAAGATATCATC ATCACCAGCAACAACAACATCAATGAGAACTGCCACAAGGCGCAGGTTGAGTTGCTCAGCCTCTGCTTCACCTTCCACGC TTCCCTCGGCTCTTCTTTTTGACTGCGATGGTGTCCTTGTTGACACTGAGAAAGATGGCCACCGTATCTCTTTCAATCAA ACATTCCAAGAGGTAAGTACCCTCTTAATTACCCTTTTGCATTTGCTCATGTAATGCTGTGAAGGGCACCGGGTGATTTC ATTTTTCACCTTTTACTATAACAATAGGGCCGTTGTAAACAACTTAATTAATCGCTTATAGCAATAAGTTTTTATCGCAA AAATGTTTATTCACAAGTTAATTTAAGAAGTTTACTGAAATAAATTCAAAATAAGTTACTGGTAAGTATAAACTCTTATT AGTAAGCTAATCTAAGCAACTTACGAAAATAAGCTAAAAAAAGCTTATAAGTAAGTCTTAAGCTGTTTACATAAGTTTTC TTAAACACTTGCATAAACGTTTTTACTATAAGCTAAAATAAACTCTTCTAAACGGGCCTTACATAGGCTCTTTCAAACAC TTGTTCTGTTATAAGATAAGCTCAAATAAGATCTTCTAAACGACATCATGGTTGTTGTTGCATTGTTTTGGCTATGCAGA GAGAACTAGGTGTTACCTGGGACGTGGACTTGTATGGGGAGTTACTCAAAATTGGAGGTGGGAAAGAAAGGTATTTCTTC TTTTTCTCCATTCAAAATTGGTTTGCGTTGGCAGAAGTAATTTTGGATAGAATTGATTCATGTTAACTCAAAAGCTTGAT ATTTTAGCTTTGGCCTCAACATGATTTTTTCGGTCTAAATGCTTCTCAGAATTTCACCAAAACATGTTCTGTTCTGGACT TCTGATCATGAAAAACCATGTTAGAGTAGATTAGAAGTGCTCCTATGGATGAACAACATTGAACCAAATATATACTAATC CATTTCTTGTACTTGTTTTTGTCTCAGCAAAAAACAAGCTGGTGCCATTAATTGTTGAATACTTGAATTCATCATTTGAT TGAATTTGAAGGTGAAGCTACACTTTATGTGTTGTGTATTTCGTTTTTCTTTTCTCTAGGATGACAGCCTACTTTAACAA GACGGGTTGGCCTGCGAATGCCCCATCAGGTGAACAAGAAAGGAAAGAATTTGTAGCTTCACTTCACAAGCAAAAGACAG AACTATTCATGGCCCTTATTGAGAAAAAACTGTTGCCTCTTCGCCCAGGTGTTGCAAAGTTGGTTACTATCTGCTCTTTA TCTTATATCCAAACATGTTTTTCTCTTTATAATGGCTTTTGTTAAATATATAAATAAAACCATTCCTTGACCTCCACTTA ATAGCTTAAGTTTTAATTGATTTGTTTGTGTACATGACATGAGAATCTCATTGACCAAGTGAACATGCAGTATTTCAATC TTTGTTGTCTCCATTATTCATAGTGAAATTAAGCTTCATGACAATTTTATTTAGTTTGGAAACTCAAGGGATGCCAATTT CCTCAAAACTAGTTGATTTTTAACATGTGGAAACACCACCCATATGTCATGAATACATGATCAAGTTTCCTCCCTAAACA TTGACCTTTTAATATTGTTGACATTGCAAAATTTTGATCAAGCTTTCTTAGTTTGTGGCTTATCTTATTGTGTGTTTCTT TTTATCAAACAAACAGGCTTGTTGATCAGGCTTTAACTCAAGGAGTCAATGTTGCTGTTTGCAGCACTTCCAATGAGAAG GCGGTATGCATAATCAGTTACACAATTCCTAAAACAAATCTTATGACTAAAGGGAAAAAGGGCTCACCAATTCTTGCTTC ATAATATTTTAAAGATTCAACTTCTAATAGTCATAGCCTCATGGTTATATATGTGTTAACATTGCTTGCTCATAAGTGAA ATATGGGTGATTTGATCTAGTAATAGGTCAACCTTCAAATTGTTAATGTATTAATTATCAGTGAATAGATCATGTGGTAC TAGTGATGCATGAACATTTATTTGTTATTTCATCTTGAGACCACAATTGTGAGTTGATATTAGGTATCTGCAATAGTATC ATTCTTGCTGGGACCTGAGCGAGCAGAAAAAATCCAGATATTTGCAGGAGATGTGGTTCACCGCAAAAAGCCTGATCCAG TAAGATTTTCATCCTGCTAATGTTAATTCAGAAGTTTCTCATAACACAATCCAAATATATAGACAAGCAATTAAATCCAT TTGAAAATGAAAAGTCAAATGATTAAAAGTCCTTTATGTCCAGGTTTGATGCTAAGTATATCTGTTTTAATGTTCTGGAA TAATCAGAAACTCCATCTAATTCAAAGTTTTCTTGTACTATAGCAACTTGATCCTAAAGTTGAATTATGTGGTCCTTTTT TCTATATGATTGAATATACAATACATGATCTAAGAAGCTAATTGTGTTGTGCTCTTTGTGACAGGCCATCTATATACTAG CAGCCAACACTCTGGGTGTTGAACCTTCAAGGTATCTCACACTAGTAGTGCCTAAGAGACAAAGTAACTCATGATAAAAT TATTGCTCAAATAAGATGGCATACAGCTCTAAAGTTTGAAACTGCATGTGCATTTTATGATGGATTAACTCATTTTCGAG AAAATAAAATGACTTGATATTATATACATTCTGCAGATAGTCCTTTTATACCTTTGATTGTTCAATCATGTCATGCCTCT TGTGCAAATAAACTATTTGACATTCTTTTTTATCATTGGTATATCACATTTGAATGTGAAATGTCATTATTTGTCATTTG CAGATGTGTTGTGGTGGAGGACAGTGCCATAGGCCTAGCAGCTGCTAAAGCAGCTGGTATGAAGTGTATCATAACAAAGA GCGGGTATACTCCTATACTCCCATCTACTATAAAGGAAGCAGCTTTATGTTTTCAAAATTGCTACTTGTTTGGTACAATT TGAATGCAATGAAATTTTCTATCATATCCAACTTACAATAAAGGGAAGCCCGCCAAAGCTCCTGCTATGTGCGGGTCTGT TTGACCACTTCGTTTATTGTACGCAATCTTACTTTGTTTCTTAAGCAAGAGGCTATTTCCAACAGGAATATCATACCTAC AATATCTGATCATATTTGACTACAATGTGAACACACACATGATTAAAAAGTTACCTGAGCTGATCATATTTGAGTATAAT GTGAATACTTCTAAACATGAGGTTGCTTTCTCCAATTTCAACTGACATATATATATATATATATATATATATATATATAT ATATATATATATTTTGAATACCAAATGCAGCTATACAGCAGATGAAGACTTCTTAAATGCAGATGCGGTGTTTGACTTCA TTGGTGATCCTCCTGAGGAGAGATTTGATTTGGCATTCTGTGGTAGCCTTCTTGAGAAGCAATACGTCAGCTAGCACACT ACCAAGTGAAACTCCTGAGATTTTGTTTCATTCAAGTCTCTTTCACTTCACTATTTCTATCAGTGCCTATTTCCTCTTAT GTTTTTTAGGCACACCTTTTGAGTCAATGATGAAAATTTCACCACTGGTTGTATGAAGCAATTTCATTTCTTGTCAAGTT CTTTTTTTTTTTTTATATATAATGAACGAGTAACTTTTTTTCTTGTTCATACATATTAGGGTGAACCTAATATGCACCAA TTTTAGGTGGTGTAATTTTACACCACCTACTTTGACTAGGTATAGCAGGTCAACACATTATAAAATACAAAAATACGAGT AGCTCTTATGAGTGGCAAAAAAATGAAGAAAATCAAATACATAACATTGTAAAACATGTTATTTCTAATAAACATTGGCT ATCTTTTAGTTGAGGTGGCAAAGTGGATTACCTCGCCCCGACCCACTTTCAACAGCCTTAAGCAAGGTGGGTTGATTTGA TCTACCAACAAAAGTGGGTTGAGATAGAGCATAATGGATCATACATTGTTTATAGGAAGTTGTGTTGAAAGTTAGTTTTT TATTAGAAATAACTTCTCTGTTTTTATAAAACATTGTTG
CDS sequence (LotjaGi1g1v0231100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAATGGCAGCAGCAAGTAGCATCATCTCCGTTTCCTCTGCTTCACTCTTGATCACAACACCCCAACCCAAAACGCA AACCATCCTCCTAAAACACACACATGAACATCATCATGTTCCAACATCCTCTTTGACAGGCACATCAACACTTGCTTCTC TCAAGATATCATCATCACCAGCAACAACAACATCAATGAGAACTGCCACAAGGCGCAGGTTGAGTTGCTCAGCCTCTGCT TCACCTTCCACGCTTCCCTCGGCTCTTCTTTTTGACTGCGATGGTGTCCTTGTTGACACTGAGAAAGATGGCCACCGTAT CTCTTTCAATCAAACATTCCAAGAGAGAGAACTAGGTGTTACCTGGGACGTGGACTTGTATGGGGAGTTACTCAAAATTG GAGGTGGGAAAGAAAGGATGACAGCCTACTTTAACAAGACGGGTTGGCCTGCGAATGCCCCATCAGGTGAACAAGAAAGG AAAGAATTTGTAGCTTCACTTCACAAGCAAAAGACAGAACTATTCATGGCCCTTATTGAGAAAAAACTGTTGCCTCTTCG CCCAGGTGTTGCAAAGCTTGTTGATCAGGCTTTAACTCAAGGAGTCAATGTTGCTGTTTGCAGCACTTCCAATGAGAAGG CGGTATCTGCAATAGTATCATTCTTGCTGGGACCTGAGCGAGCAGAAAAAATCCAGATATTTGCAGGAGATGTGGTTCAC CGCAAAAAGCCTGATCCAGCCATCTATATACTAGCAGCCAACACTCTGGGTGTTGAACCTTCAAGATGTGTTGTGGTGGA GGACAGTGCCATAGGCCTAGCAGCTGCTAAAGCAGCTGGTATGAAGTGTATCATAACAAAGAGCGGCTATACAGCAGATG AAGACTTCTTAAATGCAGATGCGGTGTTTGACTTCATTGGTGATCCTCCTGAGGAGAGATTTGATTTGGCATTCTGTGGT AGCCTTCTTGAGAAGCAATACGTCAGCTAG
Protein sequence (LotjaGi1g1v0231100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAMAAASSIISVSSASLLITTPQPKTQTILLKHTHEHHHVPTSSLTGTSTLASLKISSSPATTTSMRTATRRRLSCSASA SPSTLPSALLFDCDGVLVDTEKDGHRISFNQTFQERELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPANAPSGEQER KEFVASLHKQKTELFMALIEKKLLPLRPGVAKLVDQALTQGVNVAVCSTSNEKAVSAIVSFLLGPERAEKIQIFAGDVVH RKKPDPAIYILAANTLGVEPSRCVVVEDSAIGLAAAKAAGMKCIITKSGYTADEDFLNADAVFDFIGDPPEERFDLAFCG SLLEKQYVS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 17 | 17 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 24 | 24 | - | – | |
| SignalP_EUK | 1 | 15 | 15 | - | – | |
| Phobius | 1 | 3 | 3 | - | – | |
| Phobius | 4 | 12 | 9 | - | – | |
| Phobius | 13 | 17 | 5 | - | – | |
| Phobius | 18 | 329 | 312 | - | – | |
| PANTHER | 54 | 328 | 275 | 2.3E-135 | – | |
| PANTHER | 54 | 328 | 275 | 2.3E-135 | – | |
| SFLD | 84 | 312 | 229 | 0.0 | – | |
| SFLD | 84 | 312 | 229 | 0.0 | – | |
| SUPERFAMILY | 87 | 305 | 219 | 1.62E-37 | ||
| Gene3D | 88 | 304 | 217 | 5.2E-93 | ||
| CDD | 88 | 288 | 201 | 2.97518E-93 | – | |
| Pfam | 89 | 285 | 197 | 1.5E-18 | ||
| Gene3D | 100 | 184 | 85 | 5.2E-93 | ||
| TIGRFAM | 168 | 285 | 118 | 6.8E-18 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi1g1v0231100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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