Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0241600 |
| Transcript ID | LotjaGi1g1v0241600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | TPR repeat-containing thioredoxin TTL1-like protein; TAIR: AT5G65160.1 tetratricopeptide repeat (TPR)-containing protein; Swiss-Prot: sp|Q9MAH1|TTL1_ARATH TPR repeat-containing thioredoxin TTL1; TrEMBL-Plants: tr|K7KUC7|K7KUC7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0241600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:57779680..57784471) extracted from Lotus japonicus Gifu genome v1.2.
GTGGATTTAGGTATTTATAATTTTTTCCTATGAGTCCTCCACACTACCTACTGTATCTCCAAAGTCTGAAAGAAGAGCTA AAGGAGTTTCTTGGAAGCCACTCTTGGAGGCATTAGCTTTCTACGTGTTTGTGTGTCACTGTGTCTCTATATACATACCC CCAATTCCAAATGTCACAACACCCTGCACTGGCCTAGACCACAAGCCTCTCACATAATAATAAACTCAATTCATACTCAA GCTACCACTTGATCATTTCACTTTCCTAACTTGTCAATTTTCTTTCATCTTCTTCGTGTTTGTTTGTGAGTGACTTCAAC ATATCACAGTCATTTCATCAGAAACTTCACCTACACTGATCTCACCACTTCAAGCAGGGTCAATTTTTCAACTAGTCATC AATGGCAGGGAAAATCAAGAACAAGTTGGAGGTTGAATTGGGCTGCAGTTTCATGGCAAGATTTTTCAACCTCAAAAACA ATAAGCTAAGAAAATCCTCTGTTCATTCACTACCCATGAAGGCTAGCAACAACAACAGCATCATCATTCCACAGCACAAA GAACAAGGCAAAAACGATGCCAAGAGGCCTCAAATTCTTGAACCAAACAAGGTTCAAAATCCAATTCCAACAGAGCCTCA TTCATCCAGAAAGAGTACTTCTAGTTCTGCATACCGAAATTCGAGACCTTCAGATGCTGCAAGAAGCTCAATTCAACAGA GCCAGGACTCAAGCGAAGAAAGCAACCATAATCTGCAACTTGCTAGGATAAGCACTAGTCACCAGCCGCAGAGAGAAACC AACGAGGGAAAATCCCCAGCCTTGAAAATCACTGGGAACTTGCTTATGAATAACAGTCCAAGAAATAGTGTTACCAAAAG TCAGGATTGTGCTGCCAAGAATAAAGAATTGAACACTTTGTCAAGTTCTTATCGCAGTAATGGTGTGATGGGGAATATTA TGAGGAAGGGCGGGGATGAGGTTGCACAATTTCGAAGTCCGAGGACAGGAAGAGGAGCAGACCCTGAGGTGTTGAAGCAC ATGGGAAATGAAGCATACAAGCAGGGAAGGTTTGGAGAAGCTTTGGCTTTGTATGACAGAGCAATTGCTCTTGATTCTAA CAAGGCAACGTATCATTGCAACAAGAGTGCGGCTTTGATTGGCTTAGGACGGTTCGTGCAGGCGATTGTTGAATGTGAGG AAGCTATCAGGCTTGAACCTTCATATGGCAGAGCTCATAGCCGTTTGGCTACTATATATTTCAGGTACTCAAATGATAAT GAATATGATGATAATGTTGTTGTAATTGGCTTCATAGATTTTGCAATGGACTAGTACAAGAAAGAATTTGGGTTCTTGCA GTTAGGACAATCCTACATCACATAGGCTCATATGTTTTATCAAGATCAGACGGCATAGATAAGCTTAACATTTGAGTTGT CTGATCTTGATTGAACAACTCATATTACTTGACTGCGTGAATTTAGAGATTCTATGACGGCACGAAATCCAAATTCTAGA ACAAATGGGTTTGATTTCGGGCTATGGTGGGTGAAATTTATTTGTCTAAATCCAAAGCAGTCATTGCTCCATAACTGTTT GATCAAAGATTAGACGGCTATGAAGCTGTAACCGCACTGAATTTAGGACAAGGTGACTGCAGGGACGGGTGGGTGCGGTA TTTGTTTAGTGGTTGCTTTTTCCTTAGAGATGAAATTTTTTGAATGCAGATTGGGAGATGCAGAAAAGTCACTGAATTGC AATCATGAAACCCCATATGTTGATTCTGTACTCACTTTCAAAGCTGAGGCTCTTCAAAATCACCTTAACAAATGCACTGA AGCCAGGAACATTAAAGACTGGAAGGTTATACTAAAGGAAACACAGTCTGCAATGTCCTTAGGTGCTGATTCTGCTCCAC TGGTTAGTTTCCTTGGTCTATATTTTTTTTTGCTACATTTTTTATCATTGGATTTTGTATCAAAATTCACTTTCAATTGA GTTTCCTAGAACTCCCTAGATGAGATAATGCCTTGTGCTGACTAAAAATGGTTATGTGTGCCAGGTTTATGCTTTGCAAA CTGAAGCCTTGTTGAAGCTTCAAAGATATCAAGAGGCATTTGCTAACTACGAGAAAATGCCAAAATATGACCTTGATTGG TGTAACAAATTATTTGGTGTGGCTCCCAGCGCTTACATTTTGATGACAGGAGCACAAGTTTACTTGGCAGCCGGAAGGTT GGTGAAAATGCTTTATTTTAGTATGCTTAACAACTTCTCCAAACACAGTTTTTGACTTTTTGTATTTTGCATTACATGTA AACAAAGAATATCAATTGAAATTTTCCGATGTATAAAAAAAAAGAATATCAATTGAAGAAATAAGGGACCATATAGAAAT ATTAAAGCTCCTTAAAATAGTAAGCTGGAACAACAGACCCGTTCATTTTATTCAAGAATTGATTCTTGTAAAAAATTGCA ATAGGTAAACATGAATTAAAATGATGTGATTTATCATTGGATGCAGTAATGAAAAAAGTGGTTTTATAAAGTAATGTTAT GAAATTCAGTTTTAAGATCTAAGAATTGATTATGTTTCTCTTATATCTAGCAAAATTGATTTTGAGATTAAAATCAAATC TTTAAAATGACTCACAAACATTTATTTTACTATCCAGAATTGATTTTACTCTAGCAAAATTGATTATGAAGTTCCCCAAA CGTGTAACTAAACACTCTCTAAAATTGACTGTGATTATTATCCATACCGACTACTATAAATATTTTAAGCATATTTGATG TGTAACCTTAACCCTGTTTTTACATTTTTTGTGTGCTGACAGATTTGAGGAAGCTGTGACAGCATCTCAAAAAGCAGCTA AACTTGATCCGAACAGCAGCGAGGTGAATGCAGTGGTAAGGAGGGCTAGAGCAGTTACATCGGCCAGAATGAGCGGTAAC TTGCTCTTCAAGGCATCAAAATTCACGGAAGCGTGCGCGGTATACAATGAAGGACTAGAACATGATTCCTACAACTCAGT TCTGCTATGTAACAGAGCAGCATGTCGCTCCAAGCTAGGCCAATTCGAGAAAGCAGTTGAAGATTGTAATGTAGCCCTTA TAGTCCAGCCTAGTTATAGCAAGGCAAGGTTGAGAAGAGCAGATTGCAATGCCAAGGTACTTCAATTTCCACTTGAATAT AAACTCTGGCATATACTTTCTCAGAAGTCTCACGTTGACTAAAAGTATGACCGAATAAGTAAATACATCCCCTCACACCC GAAGCTGGATATCTTGAGCTAGCTTTTAAAATAAAGTTAGGCCTAATCCGAATTCTGATATACTGGTTTGCAAGAAATAA CATCATTTACTTAATCTCACTTTTTTTTTTGTCACATATAATAGTTGGAACGATGGGAAGCTGCAATTCAAGACTATGAA ATGCTAATAAGAGAAAAGCCAGGGGATGAGGAGGTAGCCAGGGCTCTGTTTGAGACACAGCTACAAATGAAGATGCTGCG CGGTGAAGATATTAAGGATTTGAAATTTGGTTCAAATTTGGTTTTCATCTCTAGCAATGACCGGTTTAGACATTATGTAA CCTCACCTGGTAAGTCATATTTGATTGCATCTTCTATGTGATTGAATTTAGGCATTACACATAACAACCACTAACCAGTT ATGGGCAATTCAACAGGAATGTCTGTGGTGCTCTTTTGCAACAAGGCAACCCAGAAACAAGTATTGCTGGTGTTGGAACA AACCTGCAAGAGATTCCCATCAGTTAATTTCCTCAAGGTTGGTTAATGTTGAATATTTAGGCTTTCCAGCTTGAGGGATT GATTGTCAACTGAAAAATTTAATATAAGAACTTTGATCTCTCTAGCAAACAGTTAAGATGGCATTAACATAGAACAAAAA TGTGAAAATTGGATTTTCATTCAGCTGTTCTGATTACAACATATAATCTTTATGGGAAACAAGAATTTTTTTATTGACCA AATGCCTCCACAGTCCACAGTATGATTTAACAAAAAAGAAACTCAATGTTTTTCCTTACTTATGATGGATTTACAATTTC AGGTGGAGATTGAAGACCATCCTTACTTGGCAAAATCAGAAGGTGTGAACTCTGTCCCATCCTTCAAAATATACAAGAAC GGATCAAGGGTTAAAGAAATTCCAGGCAACCACCACCAATTACTAGAAAGTTCAGTTAAATTGTACAGCAGCTGAAGATA ATCACGCCTCTTAAAATTACCAAATACACACAAGGAAATGAGGAACAGAAACCAATCTAATTATATCTGGCTTTATAGAA ATGGCTTACCTTGTTACAAGGCAAAAAAAAAAAACCAAAGAAGAAGCATAGGAAAAAGGAAATTTTTTGTGTTAGCAGTT GATTCTTTTAATCCTTTAGTTGTTTGAGCAATATTTAATTCTTCATACCCCATGTTTCTTGCAATGTATATTGGTTTGGG AAACCTACACAACTTCAATTTTGGTTTTTTGTTTTCTTTTTCCGGTTGATCATTTTGTATATTCTTTACAGGAGTGGATT TCAATAGGGTTGTGATTGTAAATTATTTGAGCAGTTTGGTGAAAGGAACACAATTGCTGTATATTACAGAAACATTGTGG AATATATTAAGTTATTAACTTTTGTTCGAAACGGTTAGATTGTCAACTCCACCAGCGTCATTGATTGAAACAGATTATTG ACATGAAAGAGCAGTACATGATTACATAATTAGGAATAGGTTTCTTCTATATTCTGTAGTATCAAAGCTTTT
CDS sequence (LotjaGi1g1v0241600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGGGAAAATCAAGAACAAGTTGGAGGTTGAATTGGGCTGCAGTTTCATGGCAAGATTTTTCAACCTCAAAAACAA TAAGCTAAGAAAATCCTCTGTTCATTCACTACCCATGAAGGCTAGCAACAACAACAGCATCATCATTCCACAGCACAAAG AACAAGGCAAAAACGATGCCAAGAGGCCTCAAATTCTTGAACCAAACAAGGTTCAAAATCCAATTCCAACAGAGCCTCAT TCATCCAGAAAGAGTACTTCTAGTTCTGCATACCGAAATTCGAGACCTTCAGATGCTGCAAGAAGCTCAATTCAACAGAG CCAGGACTCAAGCGAAGAAAGCAACCATAATCTGCAACTTGCTAGGATAAGCACTAGTCACCAGCCGCAGAGAGAAACCA ACGAGGGAAAATCCCCAGCCTTGAAAATCACTGGGAACTTGCTTATGAATAACAGTCCAAGAAATAGTGTTACCAAAAGT CAGGATTGTGCTGCCAAGAATAAAGAATTGAACACTTTGTCAAGTTCTTATCGCAGTAATGGTGTGATGGGGAATATTAT GAGGAAGGGCGGGGATGAGGTTGCACAATTTCGAAGTCCGAGGACAGGAAGAGGAGCAGACCCTGAGGTGTTGAAGCACA TGGGAAATGAAGCATACAAGCAGGGAAGGTTTGGAGAAGCTTTGGCTTTGTATGACAGAGCAATTGCTCTTGATTCTAAC AAGGCAACGTATCATTGCAACAAGAGTGCGGCTTTGATTGGCTTAGGACGGTTCGTGCAGGCGATTGTTGAATGTGAGGA AGCTATCAGGCTTGAACCTTCATATGGCAGAGCTCATAGCCGTTTGGCTACTATATATTTCAGATTGGGAGATGCAGAAA AGTCACTGAATTGCAATCATGAAACCCCATATGTTGATTCTGTACTCACTTTCAAAGCTGAGGCTCTTCAAAATCACCTT AACAAATGCACTGAAGCCAGGAACATTAAAGACTGGAAGGTTATACTAAAGGAAACACAGTCTGCAATGTCCTTAGGTGC TGATTCTGCTCCACTGGTTTATGCTTTGCAAACTGAAGCCTTGTTGAAGCTTCAAAGATATCAAGAGGCATTTGCTAACT ACGAGAAAATGCCAAAATATGACCTTGATTGGTGTAACAAATTATTTGGTGTGGCTCCCAGCGCTTACATTTTGATGACA GGAGCACAAGTTTACTTGGCAGCCGGAAGATTTGAGGAAGCTGTGACAGCATCTCAAAAAGCAGCTAAACTTGATCCGAA CAGCAGCGAGGTGAATGCAGTGGTAAGGAGGGCTAGAGCAGTTACATCGGCCAGAATGAGCGGTAACTTGCTCTTCAAGG CATCAAAATTCACGGAAGCGTGCGCGGTATACAATGAAGGACTAGAACATGATTCCTACAACTCAGTTCTGCTATGTAAC AGAGCAGCATGTCGCTCCAAGCTAGGCCAATTCGAGAAAGCAGTTGAAGATTGTAATGTAGCCCTTATAGTCCAGCCTAG TTATAGCAAGGCAAGGTTGAGAAGAGCAGATTGCAATGCCAAGTTGGAACGATGGGAAGCTGCAATTCAAGACTATGAAA TGCTAATAAGAGAAAAGCCAGGGGATGAGGAGGTAGCCAGGGCTCTGTTTGAGACACAGCTACAAATGAAGATGCTGCGC GGTGAAGATATTAAGGATTTGAAATTTGGTTCAAATTTGGTTTTCATCTCTAGCAATGACCGGTTTAGACATTATGTAAC CTCACCTGGAATGTCTGTGGTGCTCTTTTGCAACAAGGCAACCCAGAAACAAGTATTGCTGGTGTTGGAACAAACCTGCA AGAGATTCCCATCAGTTAATTTCCTCAAGGTGGAGATTGAAGACCATCCTTACTTGGCAAAATCAGAAGGTGTGAACTCT GTCCCATCCTTCAAAATATACAAGAACGGATCAAGGGTTAAAGAAATTCCAGGCAACCACCACCAATTACTAGAAAGTTC AGTTAAATTGTACAGCAGCTGA
Protein sequence (LotjaGi1g1v0241600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAGKIKNKLEVELGCSFMARFFNLKNNKLRKSSVHSLPMKASNNNSIIIPQHKEQGKNDAKRPQILEPNKVQNPIPTEPH SSRKSTSSSAYRNSRPSDAARSSIQQSQDSSEESNHNLQLARISTSHQPQRETNEGKSPALKITGNLLMNNSPRNSVTKS QDCAAKNKELNTLSSSYRSNGVMGNIMRKGGDEVAQFRSPRTGRGADPEVLKHMGNEAYKQGRFGEALALYDRAIALDSN KATYHCNKSAALIGLGRFVQAIVECEEAIRLEPSYGRAHSRLATIYFRLGDAEKSLNCNHETPYVDSVLTFKAEALQNHL NKCTEARNIKDWKVILKETQSAMSLGADSAPLVYALQTEALLKLQRYQEAFANYEKMPKYDLDWCNKLFGVAPSAYILMT GAQVYLAAGRFEEAVTASQKAAKLDPNSSEVNAVVRRARAVTSARMSGNLLFKASKFTEACAVYNEGLEHDSYNSVLLCN RAACRSKLGQFEKAVEDCNVALIVQPSYSKARLRRADCNAKLERWEAAIQDYEMLIREKPGDEEVARALFETQLQMKMLR GEDIKDLKFGSNLVFISSNDRFRHYVTSPGMSVVLFCNKATQKQVLLVLEQTCKRFPSVNFLKVEIEDHPYLAKSEGVNS VPSFKIYKNGSRVKEIPGNHHQLLESSVKLYSS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 672 | 672 | 0.0 | – | |
| PANTHER | 1 | 672 | 672 | 0.0 | – | |
| MobiDBLite | 67 | 117 | 51 | - | – | |
| MobiDBLite | 70 | 117 | 48 | - | – | |
| Gene3D | 206 | 560 | 355 | 2.4E-74 | ||
| SUPERFAMILY | 207 | 430 | 224 | 4.38E-31 | ||
| SMART | 208 | 241 | 34 | 5.8E-5 | ||
| ProSiteProfiles | 208 | 241 | 34 | 9.942 | ||
| ProSiteProfiles | 208 | 542 | 335 | 28.057 | ||
| Pfam | 215 | 250 | 36 | 2.3E-7 | – | |
| SMART | 242 | 275 | 34 | 0.2 | ||
| ProSiteProfiles | 242 | 275 | 34 | 6.195 | ||
| SMART | 395 | 428 | 34 | 9.7 | ||
| ProSiteProfiles | 395 | 428 | 34 | 10.119 | ||
| Pfam | 402 | 474 | 73 | 7.2E-4 | – | |
| ProSiteProfiles | 441 | 474 | 34 | 5.605 | ||
| SMART | 441 | 474 | 34 | 130.0 | ||
| SUPERFAMILY | 446 | 557 | 112 | 1.44E-26 | ||
| SMART | 475 | 508 | 34 | 0.0026 | ||
| ProSiteProfiles | 475 | 508 | 34 | 6.49 | ||
| Pfam | 487 | 543 | 57 | 3.5E-4 | – | |
| SMART | 509 | 542 | 34 | 0.2 | ||
| ProSiteProfiles | 509 | 542 | 34 | 6.608 | ||
| Coils | 515 | 535 | 21 | - | – | |
| SUPERFAMILY | 556 | 661 | 106 | 4.9E-11 | ||
| Gene3D | 566 | 672 | 107 | 1.1E-10 | ||
| CDD | 582 | 658 | 77 | 2.79979E-13 | – | |
| Pfam | 608 | 661 | 54 | 7.2E-6 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Cell redox homeostasis | Any process that maintains the redox environment of a cell or compartment within a cell. |
Expression pattern of LotjaGi1g1v0241600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…