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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0264500 |
| Transcript ID | LotjaGi1g1v0264500.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Metal transporter, putative; TAIR: AT1G15960.1 NRAMP metal ion transporter 6; Swiss-Prot: sp|Q8H4H5|NRAM5_ORYSJ Metal transporter Nramp5; TrEMBL-Plants: tr|G7J4Z1|G7J4Z1_MEDTR NRAMP metal ion transporter 6; Found in the gene: LotjaGi1g1v0264500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:64711665..64719002) extracted from Lotus japonicus Gifu genome v1.2.
ACCTCTTTCCAGCTCAAAGAGAGGTGTGAAATAAACATTATTCAATTTAAGGACATAGTTCCAAGTCTTCATAATGCAAT TTTTAAGGTCATAATTACAAACTCTTACAAATATACACTACTACCCAAGTCTAATACACGTACAAGATTAGTACGGTTGT GGTGAAACAAACTCAACATAACTTTACAAGATTAGTACGGTTGTGGTGAAACAAACTCAACATAACTTTTCATGTTCATA ATAACTAGGCTTAAATACTCTAGAAGTCCCTGGAATTGTATGTCGTACGAAAATAAGTCCCTGAATTTTTTTTCCGATTC CGGATCCTTTGTAAAAAAAAATTAATCGAAATAGGTCCCTACGCGTGTTACCGGCTGATGTGGCTTTATTTTTGCATAGT TATTATTTCCACGTGACTTTTATTAATTTTTTTTACTACACATGGATTATTAAAACAAAATTAAACATTTTATGTTTAAA TTTAATCCCTAATTCTAATTATCCTTAATCCCTAATCCCTAACAAATTAATTAGAAGAAACCTAAACCTCAATTTCAGAA TTTTCGAGCTCAACCTCAAGCCACACTCCACAACCCTCACTCACTCTCTGTACTCTCTCACAACATTCACTCTCTCATCT CAAATTCATCTCCAGACTCCACAACCACATGCAGGGGCGGATCCTCACTCACTCTCTCCCCTTCGCTCTCTCTGTCTCTC AAATCCCACAGGCCACACCCCACACTCATGACTCACCCAGTTACCTTCCCTCACCCACGAGATCACGAGAGAACAAAGTC AAAGACTCAAAGAGGTTTACAATACCTCAGTCAGTCAGACTCTTTCGCACAGAGGACGAGATGTCGAGATCGATGGAGGC AGAGGCGGTGGAGTCTAGAATCGATGGAGGCAGAGGCAGTGACTGAAATCGGTGAATGCAGAGGTGGTGTTGTGGTAGTA GTTTTCGTTGGTTCTTCTTCGTCTTCGATGGATCTGCATAAAAATTTCCCCTTTCTTTTTCTCTTTTTAGGGTTTTGTTT TCCCGCTTTCTTTTTTCTGAAATTAGAGTAGGAAGTTTTAATCTTATATGATTTAGTCACTCAAAAAAAATAAAAGAAAA ATAAAAAAGCCACGTGGAATCGATGATTGTGCAAAAATAGAGCCACATAAGCACATAACACGAGTAGGAACCTATTTCGA TTAAAAAAAAAATTCCAGGGATCCAGAATCGAAAAAAAAATTTGGGGACTTATTTTCGTACGACATACAATTCCAGAGAC CTTCAGAGTATTTAAGCCTAATAACTATTCATCAATTGTTTCTTTTTCACACAACTCGATGTTGTACATAGATCTATTTT CTCTACTTTTTTCATCTTCACACTACTTGTACTTGATGTGTGACTTGGATGTATACCCATGCATAACATGAAATTCATCT TATGATCATTGAGATAAACGTATGCACGTTACATACTACTAATATTCAAAACATCCACTAACACCTCATATATCACATTT CTCATTTCACTTTCTTGTAATGTAAACATCTTTTTCTTTTCAATAATGAAAAATCAAAGCTCATCTCAAATTGAATGGAC TAGTGTCACAGACTTACAATTGAATATTTTAATACATAATCTGCACATCAAAATCATGAATTGAGTAAGCTCTTCCCTGC TGCATATAGTCTGCATACATTAAAGATATAGAGAGACTCTTGCCGGTTTGACTTGAGTAAATTTCATGGAGATGGAACAT GAAGTACAAAGAAGTAGTGATTTAAATATGTTTTTGTTAATTATAAATAAATACACACACTTTTAATTCACTGAAGCCCA CTAGTCTTGCCCATACCATATAATACAAACAACTCAATCAGAGGACGAGCCAATGTGAGATGCAAAGAAAGAAAGAGTGA CTGATCGATGATGGAGCAAGTGAACGATGCAAATGGACCACATAATCATCAATACTCCTCAAATCACGAGGTATTTTTCC TTCTTTCTCTATGTGGGTTTCTTTTTTAATGTTTTTTTTTTTCCATTCAAGTTCTTGAGTCAGGTGTAACCCACTTGATT TAAAGTTTTCCAGCTAGTTTTAGCAATTCAATGACTCTTAGCTTGATCCATTTAATATGTGTATATTAATATATGTGTTT ATAAACAACCAACTATATATCTCACAAAGGCTTATCAAAAAATATATCTCACAAAGTTTAAGCTTTCTTGATATCATGAT TTCTAACAGAAATTAACTTATGCAAAATGACACAGAAACCATGGAGAAAGTTCTTGACACATGTAGGTCCTGGTTTCCTG GTCTCCTTGGCTTACCTTGATCCTGGGAACAGTAACTCTCTCTCTCTCTCTCTCTCTCTCTTCTGTATCTCTTTATATAT ATTCGTCTTGATCACTCTCTTGCACGTGCTTAATCGCTAAGTTATTTTACATTTTTGCAGTGGAAACTGATATGCAAGCT GGAGCTAACCACAGATATGAGGTATAGTAATTGACAAATAAACCAATAAAACAAATCAAACCATTTGAATAAATAGATGC ACACCAAAAATACTACTGTATTTTTCTTTTGTCAACCCAAAATGCTACTTTATTTAAGTTTTTGTTACTTGGAAGCGAGT GTAGGTTGGGTTACTTGTGAGTGTAGTGTGGTCCCAAATGTTTAAAACTATTGAACTTATCACATCTAACCTTATGTACC ATTGTTGTCTCCTATGAAGTATCCAATGGGACTTTGTTTGTTTCAAAATGTAACTAGACTAATTAAGTTAAACTTATTTG GTTTGCACTTGTATTCAAGGGTAATTTTAAAGACCATCTATGAACATGTTCTCTTTTCTGTCTAAATTTGAGTCTCGGTA ACACATGACTAATTATCATATTAGTGGCTATTGTTTTTTTGAAATTTACTCTTTATTGATTAATAAGCGCAGGCTCTGCA AAGAGGGATACAAGGGAAGTAGCATCTTATCATATTAGTTGTTTTTTTGAATATTAATTTATCTTTTTTCTCTCTCTTCA TTGAGCCCTTTTCCTTGTAACTTTTATTTTTCAGGCTTTTTTCTTTCTTTTTAAATCATAGGTTGAGGTCTTTTGGTGTT TTTTTTTGTCAATAGTTCTTTTGGGTTTTGATAGTGCTTGTTGGCCACTTGGCCTAGGCAGAAATGGATCTTTATATCCG AGAGTGTGTTGGGTTAGATGTGATAGCTTAGTCCAAAATGTGTAAGTAGTTTTTTCTAAATAATCTGTTTCAGTTTTTGT TAAATAATCATTTTTTAAAAAAGTGGAAATAATATGGGTTGGGTATGGGAGGTCCAGGGATCGATTCCTGGCGGGTGCAA TTTATCTTTCCGATTTTTTTTTTAAAAACTTCTTTTTTAATTAAAAATAATTTTTTTTATATAAAAAACCTGAAACAAAC GCACTCATTATGGTGTTCCTGGTGTTCAGCTGCTCTGGTTGGTACTCATTGGACTGATATTTGCGCTTATAATTCAGTCA TTGGCTGCAAATCTCGGTGTAATCACTGGTAAGATCCAAAACAACACAGTAATGCATGAAAAATGTTCAAATAACACAAA ATTCACATATGTTATATATGCATGTATGATTGTATATGTTATTTGTTTGTTATTTTCTTTGCGAGAATATTATTAATGTT ATTTGAATTTGGCAGGGAAACACCTTTCAGAAATATGTAAAGCAGAGTACCCATTATTTGTTAAGTACTGCTTGTGGTTA TTAGCAGAGGTTGCTGTCATAGCTGCAGACATACCTGAAGGTACTTATTTGTTTTCAATTTTTTTGTTTTTTGTTTTTTC CCTTTCAATCATAATCATTCAATTCAACAATAAAATACACTTTGTATTTTAATTTTATCCAAACGTGATGAATTGTTGCA GTGATTGGCACAGCCTTTGCACTTAACATACTCTTCCACATACCATTATGGGTAGGAGTTCTGATGACTGGCTGCAGCAC TCTCTTGCTTCTGAGTCTGCAGAGATTTGGGGTAATTTAGCTTTTTGTAATACTTATGAAATATGAACAATATAAAATCT CATTTAAGACATCATAATTCAGTAGTAATGTTTAGTTTTCTCTAAATCGTACACGGTTAGTTGATTCAAGGGATATATGT TTGATTTTCCTTAAGTTAGGTTTTCAATTCGAGTCTTGTGTATGGAAAAACCTCGCTGTTCATGTCATCAACCAAGACTA GATGTCCAGCTATTTTCACTATAATGTTGAACATGTAAATTACAAATTCACCAAGTCATGTTCATCGTTGATTATGATTG TAGAGGTGTCATAGACTTCTACCTAATGACATGTAAAATTTTCAATATATTCTTAACAATTGAATATAATATTGTGTCTT AGGCTCTTAGCTGCTTAAAATGGATAATTGCTCTTTGAGTAGTTTTTAAACAATGAGAAGAAAAAGTGGGTTTCATGGTT AAACTAAAAACCGCATTTTCAAGTTGCACATTAACTTTCTTTATCCAGTGTCTATATTTTGTTAACTGCATTGTAATTGA ACACTAGAGAACACAAGTTCACATAGAAATTGTTTCTCTTCACCCTTAAGAGTTAAGATTATATATTTACATAGTTTTTT CTGGTGTTTGTGCAGGTGAGGAAGTTGGAGCTACTGATAACAATCCTAGTTTTTGTGATGGCTGCATGTTTCTTTGCTGA AATGAGCTATGTCAATGTCCCCGCTTCTGGTATACTCAAGGGAATGTTTGTGCCCAAACTCGATGGTGATGGAGCCGTTG GCGATGCAATTGCCCTTCTCGGTGCCCTCATCATGCCGTATTCTCTCTTTCCCTTTGACATAACTTTCAGAGTTTAATAA CTGTGCACTCATAATACAATTTTTTTTTACAACGTCATCTAATTAGAAAAGTTCATGTATTGTAAATATCTACTACCCAA AATTTTGCTTTGGACAAAATGCAGGCACAATCTTTTCCTCCATTCTGCTCTGGTGCTGTCTAGAAAAGTACCAATTTCGG TGCGCGGCATCAATGTAAGCCATCCTTAAATTAAACAAATCCATAAGTGACAAACTATAAAATTTCACAAATAAATAATA TTTGAGACAACTTAAACTCAAACCTAGCAACTGATATAAACATGTTCCTAGTTGCAAATCTAGCTTTGCTTAATATATAA CATGTGAAACTTATACTATTATGACTTATCTGATTGATTATGCAGGATGCATGTAGATACTTTCTCATAGAAAGTGGGTT CGCACTCTTTGTAGCATTTCTAATCAATGTTGCAATGATTTCTGTCACGGGCACTGTTTGTTTTGCCAACAACCTTTCTG CAGAAAATACTGATCGGTGCAATGATCTTACCCTTAACTCTGCTTCCTTCCTTCTGAAGGTTCTTAATTTAATTCACTAT GCAGCAGAAGTTTCTATAATTGAACATAATATAAAGTTTTCTGCCTAACTAAACAAAGTTATCTCACATATAATTTCAAT ATACATCAATTGCAGAATGCGTTGGGAAGGTCTAGCTCAACCGTTTATGCCATAGCACTTCTAGCCTCAGGACAAAGCTC TACTATCACTGGAACCTATGCAGGGCAGTACATTATGCAGGTAATTAAGAAAATGATTCGTCGAAATCCGCATAGTGCAG ACACATTGTGGACACTAAGGGTGAGAAAGAAATGGAAGAGAGAATAGTAAGAGATGTGATATATAATGTGACGTGATAAG AAGAGAGATTGAGAAAAAAAATGAGGTGTCGGTGGAGTGTCTAACTGTTTGGATGTCTAAATATCATTATTGTTTAGGGA TACAATTAAACATTTTTTAATGAAGAAATGATAACTAACATGTTATGTTGAAGGATTTACTGAATTTAATTAGGTGATTG TTTTGTTGGTGCTATATATAGGGTTTCTTGGAGATAAAGATGAAAAGATGGAAGAGGAACTTAATGACTAGGTGCATTGC CATAGCACCTAGTCTTGTTGTTTCCATCATTGGTGGTTCTTCTGGATCCAGTCGCCTTATTATCATTGCATCAGTGTGTA TATTCTATATTCTCATTGTTCCCTTCACATAGAGAGAATTGAATTATATATACATGAACACCAACTAAAATTGTTTTGCA GATGATACTTTCTTTTGAGCTTCCTTTTGCATTGATTCCACTTCTTAAGTTTAGCAGCAGCAGTACCAAGATGGGACCTC ACAAGAATTCTTTGATTGTAAGTTGTCCTTTTCCATTTCTATAAAAGAAAATTCAATCCAAGTAGGATCAAAATCTTCTG TCCCCAAATAGTGTCTCAATTTCCTGTTTCACGAATGAAATATTGTCAGATCAATTAAAAACGACATGAGTGGGGCAGTA TCAAATTTATATGGTGGTTTTTAATTGACATATCAAGATTTTATTGGTAGGACTGAGAATGAGACACAATTTGATATCAG AAGATTTCAATCCTTATATAAAATGGTTATAGCCATTAAGATTAGTGAAATAGATTTGAAAACATGTGACATAATCTTCT TGCAGATTATTGTCATCTCATGGATACTAGGCTTTGGGATCATTGGTGTCAATGTATACTATCTCAGCACTGCCTTCGTG AAGTGGCTAATTCATAGCAATTTGCCAAAGGTGGCAAATGTGTTCATAGGGATTATAGTGTTTCCTCTAATGGCAGTTTA TATTCTCTCAGTTATCTACCTAACATTTAGAAAAGACACTGTTAAGACATATATTGAGACAAAGAATGACCCAATGCAAA GCCATGTAGAAAATGGGATTTTGGATAATGGTCAATTAGAGTTGAGCCATGCTCCTTACAGAGAAGACTTAGCTAGTTTC TCACTTCCAGAATAGGGGACTAAGTCTATGAATCAAAGGCATCGCCAACAAAGAAAGGGAAACTTCACATTGCTTTCAAA TCATTCAAATGTGTAACGAGAATCTAATGATTGTTGGTTCTCAAAATGATTGGTTAAAGACTTAAAGTGATCATAATATT AGGACTTTGAGAATCTTCTGCTTGAGTTGACCCCATATGCTAGTTTTGTTTATATTGAGATGTAAGTTTTATGTGTTTTG TTTTATAGTAGAAGTTTATAAGAAAACTAGTTTAGTGCAAGCACCATTCTTAAACATTCTTAATTTCTTTTTTATAAATG AAATCCCCACAGTGAGTAGCTGTGTTAATTTCTTAAACTGGTTTGATGTGATTAAAATTAACACATATACATCATCCAAT CATCCAACCACATCACACCATATACATCACACCATATACAGCAGCAGGTAAATTGAGC
CDS sequence (LotjaGi1g1v0264500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATACTTTCTTTTGAGCTTCCTTTTGCATTGATTCCACTTCTTAAGTTTAGCAGCAGCAGTACCAAGATGGGACCTCA CAAGAATTCTTTGATTATTATTGTCATCTCATGGATACTAGGCTTTGGGATCATTGGTGTCAATGTATACTATCTCAGCA CTGCCTTCGTGAAGTGGCTAATTCATAGCAATTTGCCAAAGGTGGCAAATGTGTTCATAGGGATTATAGTGTTTCCTCTA ATGGCAGTTTATATTCTCTCAGTTATCTACCTAACATTTAGAAAAGACACTGTTAAGACATATATTGAGACAAAGAATGA CCCAATGCAAAGCCATGTAGAAAATGGGATTTTGGATAATGGTCAATTAGAGTTGAGCCATGCTCCTTACAGAGAAGACT TAGCTAGTTTCTCACTTCCAGAATAG
Protein sequence (LotjaGi1g1v0264500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MILSFELPFALIPLLKFSSSSTKMGPHKNSLIIIVISWILGFGIIGVNVYYLSTAFVKWLIHSNLPKVANVFIGIIVFPL MAVYILSVIYLTFRKDTVKTYIETKNDPMQSHVENGILDNGQLELSHAPYREDLASFSLPE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 141 | 141 | 9.4E-57 | ||
| Phobius | 1 | 30 | 30 | - | – | |
| PANTHER | 1 | 141 | 141 | 9.4E-57 | – | |
| Phobius | 31 | 51 | 21 | - | – | |
| TMHMM | 31 | 53 | 23 | - | – | |
| CDD | 45 | 96 | 52 | 0.00524787 | – | |
| Phobius | 52 | 70 | 19 | - | – | |
| TMHMM | 68 | 90 | 23 | - | – | |
| Phobius | 71 | 93 | 23 | - | – | |
| Phobius | 94 | 141 | 48 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Metal ion transport | The directed movement of metal ions, any metal ion with an electric charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Metal ion transmembrane transporter activity | Enables the transfer of metal ions from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0264500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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